Basic Information

Insect: Dynastes tityus
Gene Symbol: Zfpm1
Assembly: GCA_029618875.2
Location: JAROYD020000008.1:33608089-33620390[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.4 2.8e+02 3.9 0.0 2 23 7 28 6 28 0.94

2 14 0.013 1.5 11.0 3.8 1 23 533 555 533 556 0.95

3 14 0.018 2.1 10.6 0.0 3 23 637 658 636 658 0.94

4 14 0.00024 0.028 16.5 3.8 1 23 666 688 666 688 0.98

5 14 0.0001 0.012 17.7 2.2 2 23 691 712 690 712 0.97

6 14 0.58 68 5.8 1.1 1 10 718 727 718 740 0.82

7 14 3.3e-05 0.0039 19.2 5.3 2 23 747 768 746 769 0.95

8 14 1.1 1.3e+02 4.9 1.3 6 23 783 800 781 800 0.95

9 14 0.0003 0.035 16.2 3.6 3 23 807 828 806 828 0.97

10 14 0.085 9.9 8.5 0.0 2 23 844 864 843 864 0.96

11 14 7.6e-05 0.0089 18.1 1.6 1 20 870 889 870 892 0.92

12 14 0.00038 0.044 15.8 0.2 1 23 900 922 900 922 0.98

13 14 0.0015 0.17 14.0 3.7 1 23 928 950 928 950 0.98

14 14 0.064 7.5 8.8 0.4 1 13 956 968 956 972 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.4	2.8e+02	3.9	0.0	2	23	7	28	6	28	0.94
2	14	0.013	1.5	11.0	3.8	1	23	533	555	533	556	0.95
3	14	0.018	2.1	10.6	0.0	3	23	637	658	636	658	0.94
4	14	0.00024	0.028	16.5	3.8	1	23	666	688	666	688	0.98
5	14	0.0001	0.012	17.7	2.2	2	23	691	712	690	712	0.97
6	14	0.58	68	5.8	1.1	1	10	718	727	718	740	0.82
7	14	3.3e-05	0.0039	19.2	5.3	2	23	747	768	746	769	0.95
8	14	1.1	1.3e+02	4.9	1.3	6	23	783	800	781	800	0.95
9	14	0.0003	0.035	16.2	3.6	3	23	807	828	806	828	0.97
10	14	0.085	9.9	8.5	0.0	2	23	844	864	843	864	0.96
11	14	7.6e-05	0.0089	18.1	1.6	1	20	870	889	870	892	0.92
12	14	0.00038	0.044	15.8	0.2	1	23	900	922	900	922	0.98
13	14	0.0015	0.17	14.0	3.7	1	23	928	950	928	950	0.98
14	14	0.064	7.5	8.8	0.4	1	13	956	968	956	972	0.85

Sequence Information

Coding Sequence: atgGATAGTGAGAATATCGTGTGCCCTGTTTGTACCTTATTCCTAAGACCTGGAATCACGTTGAAGGCTCATCTAAGCAGCCACCCAAAACAGAAAGTGATTGAGGCACTAGTACGAATATCTAACAGTGAGAATGAAACGAAATCACAAGCTGTCACCTCgaatcaaaatgaaaatttgattGGTTCGACAAATGCTGTAACATCTAACAGTCAAGCATGGAATTCACCATCGATGCCGGTTAATGCGGTTTACCCGAATTTTAGTGCAATGCCTGGGAATCATTCTTTTATATATCAGCAATTTATGAGTTCCTCGACGCCACCGccaaatgttttaaatgttaatcCCCTGACACAGCAAATCGTGACAATTCCGACAGTGTTCAATTCTCAAATGATGTGCCCCCCTTACGTTTATCAACAGCAGCAGGTTATTATGTCATCTGGACCTTCTGTAATGTCCATTGTCCCAAAACCTTTACCAATCGAACTTCCCACATTACCTAACCAGGAAAACCGCACTAATGCAAGTGAAATAGATGGTGACGATCAAGATGATCTAACTGACGAACCAGATTTAGTCACGATTGAAATTTCCGAGTTAAATAAgaatgaagaagaaaatttaagagaaaaacaAGGTAATATACTAGAATTAGACAAAGTAGAAACTGAAATAAGTGAAATTAAAGCAAATTCTGATTATAAAATTGATCTtacatcaaataaaattatgcaaggTAATACGATTATTGCCTGCTCAAATATTCAAAGAGAAATCTCGGAAAATTCTATCGAAGACTGCATGAAGAGTACTGAATGTGAGAGTACCCTTACAGAAGTTCAGGATGCCGAACAAGAATATCCAGTGGAGTGTAATGTTGAATTAAACAAGTCCTGTCAGACACAGACTGTAAATAATTTTGGTGAAGTCGCTGTTGGTGAGGAGGAAGAAGTGATACAAATTCCAAACGAGCCCGAAAACAAACCTAGTTGCTACTATGCAGAGgtACAGGAAAGTATTACCAACACAAACTACACCATCTTACAAAATAGTTATGAGCAAGCCGAGTCTACTTACACCTCCACTCACACAGAAAGTTTGTTCGCGTCAAGATCCCATGAACAAAACACGACCAGCGTTATAGATATGGACGGAATGAATTTATTCATcaatagcgattttttaaacaatcatCTAGTGTCTCAGGTCGACGAATTTGAGTGCGTCAACAACGAAAGGCCGCGTATTATCCTAAATATTGGAGGTCTAGAgactaattttattaatcgCGATAATAACGAGGAAAGTTTAAGTCGGGAAAGCGCTAATATTAGGACTGACGAGCATATGCCTCCCAGAGGCGAGTTATCGGGGCAAGAAAGCAATGGCGGCACGAGTGATGTCAACTGGAACCGGGTACAATACCAAGAGGTGTGCAGCACGTATGATCTAATTGCCAGGGAAAATTGGAACGATGATATTTCCGATACAGAGCCGAATTCTGCTCCAAATCAACCCCACAATCAGATATTATCGAACTGTGAGGATGATACGCCAACAGTCTCGGGTTTTCGAGAACCCCCGATCACCTATAAGTGTCCCACATGCGGGGAATCCTTTAATTGCCCTAAAGAACGAAGAGTCCATCAGCGGGATCACCACAGTATCAGCGAGAAAAAGGAAAAGGAGATTGGAGGGCAAATAGGTGGTAAACGCGTTAAGAAATTGAcgataaaaccaaaaaaagccGATATAAAGACGGAAAATAATTTCGACAACGtcttcactaataaattaaaactagaATCTAATAATGAAGGTGATAAATGCGACGTAATACcccaaaataatgaaatagaagtacaaaaaaaagaagacgTCACCATAAATAACCCTAATATATGCACAGTATGCGATATGGTAGTCGCCGACAACAACGCTCTCAAACAACACCAACTCGAAGCTCACAATCTCTCCTCAGATGTCCGACACAAATGTAAGACATGTGAGCAGACGTTTCCCAATGAATCTAAATACACGGAACACCTCAGGACGCATCCTCTGGAATGCAGATTGTGCGGGAAATACTTCTATCGTAAGCAGAATATGCAACTGCACATGAAGAGGCATCTAGGTATTAAGCCCTATAAATGCAACATCTGCGAGAAGGCGTTCTTAACGAAGCAGAAGCATGACgaacataaaaatattcataCGGGTGATACTCCTATCAAGTGTAACATGTGCGATGAGACCTTTCGGAGGCACTCGAATCTTGTGCAGCATAGGAATAGGCATCATTTCAATATGAAGCGGAAGATGAAGGATTACGTTTGTTTTTGTGGAGAgATTTTTCACTCTAAACGAAAACTAGCATGGCACAAAGAGATCCACGACCCCAAACCGAAAGCGTGCAGCCATTGTAGCGAGAAGTTCATCCACATGTCCAGCTTGACGCGGCACATCCGGCGTGCCCACAACGAGCGTTTCCTGCCGAATAAGGAACGCGTCTCCGAGAACGTCGAATGTCCGATCTGCAAGGGTGTCTACCTCCGTTCGTATCTCGAGGTCCACATACGCAACCACAGCGGTCACAAGCCGTTCAGCTGCCTCATCTGCAACAAAAGCTTCACCACCAAGTGGAACTTGAAGCTGCACAAGTGGACGCACGCGTCGCGTACCGCTAAGCCGTTCAAGTGCGACTTGTGCAAAGGAGCGTTTATCAGGGAATCGGACTATACGGCCCATATGAACGCTCATAAGTCGGTTAAGCCTTACACGTGCAACTATTGCGGCGCTCAGTTCATCAGGAAGTACAACTGCCAGAGGCACGTCAAGGAGCACGAGAAAGTGAAGACGTTTTCGTGTCAAGTTTGCGGGAAATCGTTTCATAGGTTAGAGAAATGGCGGGGACGTCAAGAAGAGTGTATCTTATTAAAAGgagattatttagaaaaataa
Protein Sequence: MDSENIVCPVCTLFLRPGITLKAHLSSHPKQKVIEALVRISNSENETKSQAVTSNQNENLIGSTNAVTSNSQAWNSPSMPVNAVYPNFSAMPGNHSFIYQQFMSSSTPPPNVLNVNPLTQQIVTIPTVFNSQMMCPPYVYQQQQVIMSSGPSVMSIVPKPLPIELPTLPNQENRTNASEIDGDDQDDLTDEPDLVTIEISELNKNEEENLREKQGNILELDKVETEISEIKANSDYKIDLTSNKIMQGNTIIACSNIQREISENSIEDCMKSTECESTLTEVQDAEQEYPVECNVELNKSCQTQTVNNFGEVAVGEEEEVIQIPNEPENKPSCYYAEVQESITNTNYTILQNSYEQAESTYTSTHTESLFASRSHEQNTTSVIDMDGMNLFINSDFLNNHLVSQVDEFECVNNERPRIILNIGGLETNFINRDNNEESLSRESANIRTDEHMPPRGELSGQESNGGTSDVNWNRVQYQEVCSTYDLIARENWNDDISDTEPNSAPNQPHNQILSNCEDDTPTVSGFREPPITYKCPTCGESFNCPKERRVHQRDHHSISEKKEKEIGGQIGGKRVKKLTIKPKKADIKTENNFDNVFTNKLKLESNNEGDKCDVIPQNNEIEVQKKEDVTINNPNICTVCDMVVADNNALKQHQLEAHNLSSDVRHKCKTCEQTFPNESKYTEHLRTHPLECRLCGKYFYRKQNMQLHMKRHLGIKPYKCNICEKAFLTKQKHDEHKNIHTGDTPIKCNMCDETFRRHSNLVQHRNRHHFNMKRKMKDYVCFCGEIFHSKRKLAWHKEIHDPKPKACSHCSEKFIHMSSLTRHIRRAHNERFLPNKERVSENVECPICKGVYLRSYLEVHIRNHSGHKPFSCLICNKSFTTKWNLKLHKWTHASRTAKPFKCDLCKGAFIRESDYTAHMNAHKSVKPYTCNYCGAQFIRKYNCQRHVKEHEKVKTFSCQVCGKSFHRLEKWRGRQEECILLKGDYLEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01253015;
90% Identity: iTF_00626504;
80% Identity: -