Basic Information

Insect: Marronus borbonicus
Gene Symbol: Zfpm1
Assembly: GCA_902655005.1
Location: LR737387.1:1455926-1466844[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.2 96 3.8 0.0 2 23 16 37 15 37 0.94

2 15 0.0044 0.36 11.5 3.7 1 23 542 564 542 565 0.96

3 15 0.0087 0.72 10.5 0.0 3 23 646 667 645 667 0.94

4 15 0.00012 0.0096 16.4 3.8 1 23 675 697 675 697 0.98

5 15 4.9e-05 0.004 17.6 2.2 2 23 700 721 699 721 0.97

6 15 0.28 23 5.8 1.1 1 10 727 736 727 749 0.82

7 15 1.6e-05 0.0013 19.1 5.3 2 23 756 777 755 778 0.95

8 15 0.63 52 4.7 1.1 6 23 792 809 790 809 0.96

9 15 0.00047 0.038 14.5 4.7 3 23 816 837 816 837 0.98

10 15 0.041 3.4 8.4 0.0 2 23 853 873 852 873 0.96

11 15 3.7e-05 0.003 18.0 1.6 1 20 879 898 879 901 0.92

12 15 5e-05 0.0041 17.6 0.3 1 23 909 931 909 931 0.98

13 15 0.00071 0.058 14.0 3.7 1 23 937 959 937 959 0.98

14 15 8.6e-07 7e-05 23.1 3.0 1 23 965 987 965 987 0.98

15 15 0.00046 0.038 14.5 6.4 1 23 993 1015 993 1016 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.2	96	3.8	0.0	2	23	16	37	15	37	0.94
2	15	0.0044	0.36	11.5	3.7	1	23	542	564	542	565	0.96
3	15	0.0087	0.72	10.5	0.0	3	23	646	667	645	667	0.94
4	15	0.00012	0.0096	16.4	3.8	1	23	675	697	675	697	0.98
5	15	4.9e-05	0.004	17.6	2.2	2	23	700	721	699	721	0.97
6	15	0.28	23	5.8	1.1	1	10	727	736	727	749	0.82
7	15	1.6e-05	0.0013	19.1	5.3	2	23	756	777	755	778	0.95
8	15	0.63	52	4.7	1.1	6	23	792	809	790	809	0.96
9	15	0.00047	0.038	14.5	4.7	3	23	816	837	816	837	0.98
10	15	0.041	3.4	8.4	0.0	2	23	853	873	852	873	0.96
11	15	3.7e-05	0.003	18.0	1.6	1	20	879	898	879	901	0.92
12	15	5e-05	0.0041	17.6	0.3	1	23	909	931	909	931	0.98
13	15	0.00071	0.058	14.0	3.7	1	23	937	959	937	959	0.98
14	15	8.6e-07	7e-05	23.1	3.0	1	23	965	987	965	987	0.98
15	15	0.00046	0.038	14.5	6.4	1	23	993	1015	993	1016	0.95

Sequence Information

Coding Sequence: ATGAATTCTCTGcagaaaaatacagaaatggatAGTGAGAATATCGTGTGCCCTGTTTGTACCTTATTCCTAAGACCTGGGATTACATTGAAAGCTCATCTGAGCAGCCATCCAAAGCAGAAAGTGATTGAGGCACTTGTACGAATATCTAGCAgtgaaaatgaaacgaaaacgCAAGCTACCACCTcgaatcaaaatgaaaatttcattgGTTCAACGAACACAATAACATCTAACAGTCAAGCATGGAATTCACCATCGATGCCGGTCAATACAGTTTATCCGAATTTCAGTGCAATGCCTGGGAATCATTCATTTATCTATCAGCAGTTTATGAGTTCCTCGACACCGCCACCTAATGTTCTAAACGTTAACCCCCTAACACAGCAAATCGTGACAATTCCAACAGTCTTCAATTCCCAAATGATGTGTCCTCCTTATGTTTATCAACAGCAGCAAGTTATTATGTCATCTGGACCTTCTGTAATGTCCATTGTCCCAAAACCCCTACCAATTGAACTTCCCACGTTACCTAACCAGGAAAGCCGCGCTAGTACAAGTGAAATAGATGGTGATGATCAAGATGATCTAACTGACGAACCAGATTTAGTTGCCATTGAAATTTCCGAGTTAAATaagaatgaagaagaaaatttaagggAAAAAGAAGGTAATATAGTAGAATTAGACAAAGTAGAAACTGAAATAAgcgaaattaaagcaaattccGATTATAAAGTCGACGTTAtgccaaataaaattatgcaggGCAATACAGTTATTGCCTGCTCAAATATTCAAAGGGAAATCTCGGAAAATTCTATCGTAGACTGCATGAAAAGTGCTGAATATGAGAATAGCCTTACAATAGATCAGGATGCTGAACAGGAGTATCCAGTTGAGTGTAATGTTGAATTAAACAAATCCTGTCAGACACaaactgtaaataattttggtgAAGTTGCTGTtagtgaagaagaagaagtgatACAAATTCCAAATGAACCCGAAAACAAACCTAGTTGCTACTATGCAGAGgTACAAGAAAGCATTACCAACACAAACTACACCATCTTACAAAACAGTTTCGAGCAAGCTGAGTCTACTTACACCTCCACTCACACGGAAAGTTTGTTCGCGTCAAGATCCCATGAACAAAACACGACTAGCGTTATAGATATGGACGGAATGAATTTATTCATCAAtagtgattttttaaacaatcaacTAGTGTCTCAGGTAGACGAATTTGAGTGTGTCAACAACGAAAGGTCGCGTATCATCCTAAATCTAGGAGGCTTAGagactaattttattaatcgcgATAATAACGACGAAAGTTTAAGTCGGGAAAGCGCTAATATTAGGACTGATGAGCATATGCCTCCCAGAGGCGAGTTATCAGGGCAAGAAAGCAATGGCGGCACTAGTGACGTGAACTGGAACCGGGTACAGTACCAAGAGGTGTGCAGCACTTATGATCTAATTGCCAGGGAAAATTGGAACGATGATATTTCTGATACTGAGCCGAACTCTGCTCCAAATCAATCCCACAGTCAGATATTATCGAACTGTGAGGATGATACCCCAACAGTTTCGGGTTTTCGGGAACCCCCAATCACCTATAAATGTCCCACCTGCGGGGAATCCTTTAATTGCCCTAAAGAACGGAGAGTCCACCAACGGGAGCATCACAGTATCAGCGAGAAACAGGAAAAGGAGATCGGAGGGCAAATAGGTGGCAAACGCGTTAAGAAATTGACGATAAAACCTAAAAAAACCGATATAAAGACGGAAAATAATTTCGACAATGTCTTCACTAATAAATTAAAGCTAGAATCTAACAATGAAGGTGATAAATGCAATGTAATACcccaaaataatgaaatagaagtacaaaaaaaagaagacgtcACCATAAATAACCCTAACATATGCACGGTATGCGATATGGTAGTCGCCGACAACAACGCCCTGAAACAACACCAACTCGAAGCTCACAATCTCTCCTCGGATGTTCGGCACAAATGTAAGACTTGTGAGCAGACCTTTCCCAACGAATCTAAATACACGGAGCACCTCAGGACGCATCCTTTGGAATGCAGATTGTGCGGGAAGTATTTCTATCGTAAGCAGAATATGCAACTGCACATGAAGAGGCATCTCGGTATTAAACCCTATAAATGCAACATCTGCGAAAAGGCATTCTTAACGAAGCAGAAGCATGACGAACATAAAAATATCCACACCGGTGATACTCCTATAAAGTGTAACATGTGCGATGAGACTTTTCGGAGACACTCGAATCTTGTACAGCACAGGAATAGGCATCATTTCAATATGAAACGGAAGATGAAGGATTACGTTTGCTCTTGTGGAGAGATTTTTCACTCTAAACGAAAACTAGCATGGCACAAAGAGATCCACGACCCGAAACCGAAAGGGTGCAGCCATTGCAGCGAGAAGTTCATCCACATGTCCAGCTTGACGCGACACATCCGGCGTGCCCATAACGAGCGTTTCCTGCCGAATAAGGAACGCGTCTCCGAGAACGTCGAATGTCCAATCTGCAAGGGCGTCTACCTCCGTTCGTATCTGGAGGTCCACATACGCAACCACAGCGGTCACAAGCCGTTCAGCTGTCTCATCTGCAACAAGAGCTTCACCACCAAATGGAACCTGAAGCTGCACAAGTGGACGCACGCGTCGCGTACCTCTAAGCCGTTCAAATGCGATCTGTGCAAGGGAGCCTTTATCAGGCAATCGGACTATACGGCTCATATGAACGCTCATAAATCGGTTAAGCCTTACACGTGCAACTATTGCGGCGCTCAGTTTATCAGGAAGTACAATTGTCAGAGGCACGTCAAGGAGCACGAAAAAGTGAAGACGTTTTCGTGTCAAGTTTGCGGGAAATCGTTTCATAGATCTTATTACTTAAAAGACCATATAAGGGTGCATAGCGGCGTTCGTCCATATGCCTGTCATATCTGCGGGAAAACCTCGACGACCAAATCCAATCACAATAAGCACGTTCGAATCCACCATGCCAGGGAACCGGTGAGCACCGAAAACTAG
Protein Sequence: MNSLQKNTEMDSENIVCPVCTLFLRPGITLKAHLSSHPKQKVIEALVRISSSENETKTQATTSNQNENFIGSTNTITSNSQAWNSPSMPVNTVYPNFSAMPGNHSFIYQQFMSSSTPPPNVLNVNPLTQQIVTIPTVFNSQMMCPPYVYQQQQVIMSSGPSVMSIVPKPLPIELPTLPNQESRASTSEIDGDDQDDLTDEPDLVAIEISELNKNEEENLREKEGNIVELDKVETEISEIKANSDYKVDVMPNKIMQGNTVIACSNIQREISENSIVDCMKSAEYENSLTIDQDAEQEYPVECNVELNKSCQTQTVNNFGEVAVSEEEEVIQIPNEPENKPSCYYAEVQESITNTNYTILQNSFEQAESTYTSTHTESLFASRSHEQNTTSVIDMDGMNLFINSDFLNNQLVSQVDEFECVNNERSRIILNLGGLETNFINRDNNDESLSRESANIRTDEHMPPRGELSGQESNGGTSDVNWNRVQYQEVCSTYDLIARENWNDDISDTEPNSAPNQSHSQILSNCEDDTPTVSGFREPPITYKCPTCGESFNCPKERRVHQREHHSISEKQEKEIGGQIGGKRVKKLTIKPKKTDIKTENNFDNVFTNKLKLESNNEGDKCNVIPQNNEIEVQKKEDVTINNPNICTVCDMVVADNNALKQHQLEAHNLSSDVRHKCKTCEQTFPNESKYTEHLRTHPLECRLCGKYFYRKQNMQLHMKRHLGIKPYKCNICEKAFLTKQKHDEHKNIHTGDTPIKCNMCDETFRRHSNLVQHRNRHHFNMKRKMKDYVCSCGEIFHSKRKLAWHKEIHDPKPKGCSHCSEKFIHMSSLTRHIRRAHNERFLPNKERVSENVECPICKGVYLRSYLEVHIRNHSGHKPFSCLICNKSFTTKWNLKLHKWTHASRTSKPFKCDLCKGAFIRQSDYTAHMNAHKSVKPYTCNYCGAQFIRKYNCQRHVKEHEKVKTFSCQVCGKSFHRSYYLKDHIRVHSGVRPYACHICGKTSTTKSNHNKHVRIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01253015;
90% Identity: iTF_00626504;
80% Identity: -