Basic Information

Insect: Polyploca ridens
Gene Symbol: rdx
Assembly: GCA_951394255.1
Location: OX596253.1:9659862-9669407[-]

Transcription Factor Domain

TF Family: BTB
Domain: zf-C2H2|ZBTB
PFAM: PF00651
TF Group: Zinc-Coordinating Group
Description: The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.3e-35 1.7e-32 112.7 0.1 2 108 266 370 265 372 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.3e-35	1.7e-32	112.7	0.1	2	108	266	370	265	372	0.96

Sequence Information

Coding Sequence: ATGTATTGTGTTCGCGTCCCAGATTTGGGAAGCGAAACTGCGATCGCTGATTGGCGTATTACGACGACGTTGCTACATTTTCGCCTTGCATTCAATTCCATGAGAAGTTGCATGTTTAACCTATCGGCCACTAGGCTCGGGTCGGGCAGCGAGTGCGTCGGTGGAGGGTCGGGCGGCGGCGCGCCCGCTCCTCAGTCGGCGCGCGTCTCCTCGAACGGCGCCGGCGGGATGGCGGTGAGCCGCGTGCCCAGCCCGTTGCACGACGGGAACACGCCCGTTGCAGAGAACTGGTGCTTCACACAGGTCAAAGTGGTTAAATTCAGCTACATGTGGACAATAAACAATTTTAGTTTTTGTAGAGAGGAAATGGGTGAAGTGTTAAAATCATCGACTTTTTCAGCAGGTGCTAGTGATAAGTTAAAGTGGTGTCTTCGCGTTAATCCTAAAGGACTCGATGAAGAGAGCAAAGACTACTTATCGTTATATCTATTATTAGTGTCGTGTAATAAATCAGAAGTGCGGGCAAAGTTCAAGTTCTCAATATTAAATGCAAAAAGAGAAGAAACGAAAGCGATGGAATCACAACGCGCGTATAGATTTGTACAAGGCAAAGATTGGGGATTCAAAAAATTTATAAGAAGAGATTTCCTATTGGATGAAGCGAACGGCCTCCTACCAGAAGACAAGTTAACGATATTCTGCGAAGTGTCAGTGGTCGCGGACAGTATCAATATTAGTGGTCAGAGTAATGTGGTGCAGTTCAAAGTGCCAGAGTGCCGACTATCCGACGATTTAGGGGCCCTCTTTGATAATGAAAGGTTTTCTGATGTCACGTTAGCAGTCGGCGGCAGGGAGTTCCAAGCACATAAAGCAATATTAGCAGCGCGAAGTCCAGTATTTGCGGCGATGTTTGAACATGAAATGGAGGAGAGGAAACGAAATAGAGTCGATATCACCGACGTAGACCACGAAGTTTTAAGAGAAATGCTACGCTTCATATACACTGGACGAGCGCCCAATCTAGATAAAATGGCAGACGATTTATTAGCGGCTGCAGACAAGTATGCGTTAGAACGGTTAAAAGTAATGTGTGAAGAGGCGCTCTGCTTGAGTCTTTCGGTCGAGACGGCAGCTGATACCCTCATACTGGCGGATCTGCATTCGGCGGACCAGCTCAAGGCGCAAACTATTGATTTTATTAACACGAGTCATGCGACCGACGTGATGGACACGGCCGGGTGGAAGAACATGATCTCGTCGCACCCGCACCTGATCGCCGAGGCGTTCCGCGCGCTCGCCACGCAGCAGCAGCAGATCCCGCCCATCGGCCCGCCGCGCAAGCGAGTCAAGCAAGCCTAG
Protein Sequence: MYCVRVPDLGSETAIADWRITTTLLHFRLAFNSMRSCMFNLSATRLGSGSECVGGGSGGGAPAPQSARVSSNGAGGMAVSRVPSPLHDGNTPVAENWCFTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGASDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSINISGQSNVVQFKVPECRLSDDLGALFDNERFSDVTLAVGGREFQAHKAILAARSPVFAAMFEHEMEERKRNRVDITDVDHEVLREMLRFIYTGRAPNLDKMADDLLAAADKYALERLKVMCEEALCLSLSVETAADTLILADLHSADQLKAQTIDFINTSHATDVMDTAGWKNMISSHPHLIAEAFRALATQQQQIPPIGPPRKRVKQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00275425; iTF_00822081; iTF_01041921; iTF_01535041; iTF_00043682; iTF_00685573; iTF_01377608; iTF_00171954; iTF_01532223; iTF_00923810; iTF_00018275; iTF_00076675; iTF_00948003; iTF_01302499; iTF_01335107; iTF_00006373; iTF_01285668; iTF_00683461; iTF_00662331; iTF_00869767; iTF_01437191; iTF_00441640; iTF_00796616; iTF_01197896; iTF_01403560; iTF_01526184; iTF_00462505; iTF_00325524; iTF_01463401; iTF_01090899; iTF_00445322; iTF_01260234; iTF_00077611; iTF_00951947; iTF_00850892; iTF_00985259; iTF_01508171; iTF_01507323; iTF_00824860; iTF_01506461; iTF_01026443; iTF_00342316; iTF_01042764; iTF_01082572; iTF_00124397; iTF_00723245; iTF_01464269; iTF_00682542; iTF_00968142; iTF_01173390; iTF_01340334; iTF_01029380; iTF_01086375; iTF_00667657; iTF_00017450; iTF_00177292; iTF_01340335; iTF_00237875; iTF_00794777; iTF_00038959; iTF_00235951; iTF_00276559; iTF_00889359; iTF_00994447; iTF_00656240; iTF_00010257; iTF_00284657; iTF_00147634; iTF_00819283; iTF_01222579; iTF_00831348; iTF_00859604; iTF_01094164; iTF_01246036; iTF_00248213; iTF_01331797; iTF_01453365; iTF_01452459; iTF_00323599; iTF_01451612; iTF_00041910; iTF_01027459; iTF_01339046; iTF_00810221; iTF_01084384; iTF_00707094; iTF_01416951; iTF_01430039; iTF_00178329; iTF_01368217; iTF_00120641; iTF_00772129; iTF_00795809; iTF_00888385; iTF_01159521; iTF_01425217; iTF_00121570; iTF_00301314; iTF_00446338; iTF_00875426; iTF_01075618; iTF_01154210; iTF_01264802; iTF_01361762; iTF_00040003; iTF_00173187; iTF_01092163; iTF_00123492; iTF_00163076; iTF_00383813; iTF_00844485; iTF_01061989; iTF_01085509; iTF_01147461; iTF_00023878; iTF_00179526; iTF_00187270; iTF_00300358; iTF_00973894; iTF_01362502; iTF_00375431; iTF_01031239; iTF_00447368; iTF_00622952; iTF_00636616; iTF_00712040; iTF_01538888; iTF_01142473; iTF_01440201; iTF_01064778; iTF_01118442; iTF_00302251; iTF_00726571; iTF_00637804; iTF_00037933; iTF_00758381; iTF_00837677; iTF_00906285; iTF_00908973; iTF_01028429; iTF_01115789; iTF_00806830; iTF_00036943; iTF_00907151; iTF_01544047; iTF_00958032; iTF_01534065; iTF_01495122; iTF_00928819; iTF_01030355; iTF_01155475; iTF_00042772; iTF_00390516; iTF_01495860; iTF_00745909; iTF_01544981; iTF_01564789; iTF_00835702; iTF_01144630; iTF_01385910; iTF_00374327; iTF_00429143; iTF_00709367; iTF_00897911; iTF_01063863; iTF_01117463; iTF_01149687; iTF_01363224; iTF_01527448; iTF_01547960; iTF_00364153; iTF_00206202; iTF_00071611; iTF_00785307; iTF_01062939; iTF_01093243; iTF_01230747; iTF_00784508; iTF_00815868; iTF_01152284; iTF_01441212; iTF_00198333; iTF_00425565; iTF_00851933; iTF_01192830; iTF_01546750; iTF_01119487; iTF_01130111; iTF_01415999; iTF_01533183; iTF_00111776; iTF_00122528; iTF_00274528; iTF_00815168; iTF_00908032; iTF_01217600; iTF_01247232; iTF_01494400; iTF_00492292; iTF_00488721; iTF_00489429; iTF_00483039; iTF_01350823; iTF_00190024; iTF_00348265; iTF_01201705; iTF_00679582; iTF_00061194; iTF_00062862; iTF_00525934; iTF_00891950; iTF_00967280; iTF_01558384; iTF_01162321; iTF_01114322; iTF_01136980; iTF_00569740; iTF_01164053; iTF_01519413; iTF_01109399; iTF_00099064; iTF_00092228; iTF_00093517; iTF_00101744; iTF_00100374; iTF_01012539; iTF_00345150; iTF_01200958; iTF_00478784; iTF_01053473; iTF_01356193; iTF_00957186; iTF_01277026; iTF_00424740; iTF_00133349; iTF_00246405; iTF_00456229; iTF_00553093; iTF_01454949; iTF_00363335; iTF_01457479; iTF_00014088; iTF_01415112; iTF_01288265; iTF_00160810; iTF_00389706; iTF_01257194; iTF_00320683; iTF_00984331; iTF_01554763; iTF_00588204; iTF_01276332; iTF_01555468; iTF_00176495; iTF_00346799; iTF_00571216; iTF_00485201; iTF_00611409; iTF_00672273; iTF_00894033; iTF_00199155; iTF_00351923; iTF_00591027; iTF_00367287; iTF_01191287; iTF_01265911; iTF_00211704; iTF_00598938; iTF_00546715; iTF_01352731; iTF_01395899; iTF_00245500; iTF_00486620; iTF_00605629; iTF_01249181; iTF_01318334; iTF_01054431; iTF_00472416; iTF_00599648; iTF_00924892; iTF_00932764; iTF_00654397; iTF_01388605; iTF_01436221; iTF_01079998; iTF_00341439; iTF_00809279; iTF_01134911; iTF_00022912; iTF_01316480;
90% Identity: iTF_00000440;
80% Identity: iTF_00007228;