Zkol009866.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zaprionus kolodkinae
Gene Symbol
rdx
Assembly
GCA_018901885.1
Location
JAEIFM010000181.1:12071020-12084411[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-34 3.7e-32 110.6 0.7 2 109 257 362 256 363 0.97

Sequence Information

Coding Sequence
ATGTTCGAGCCTTATGTGAAAATAAAAAAAAAGCGTAACGTGCATGAAATCTATCAGAATGAGAATAATATCGCCGATGTCGATGTCGATTTTTGTAACGCCGCCGCAAATTTCTGTGATAAAAGATTGCCGGTGAACGAATGTCAGGCAAGCCAAACAGCTAGAGTCACCTCGAACCTGCACGCATCCAGTAGCACAATGGCGGTCAGCCGTGTTCCCTCGCCGCCCTTGCCGGAAGTCAATACGCCAGTCGCTGAGAACTGGTGTTATACGCAGGTCAAAGTGGTTAAATTTAGTTATATGTGGACCATAAATAACTTTAGTTTTTGTCGGGAAGAAATGGGTGAAGTACTCAAATCGTCCACATTCTCAGCCGGTGCTAATGACAAACTAAAATGGTGTTTACGGGTAAATCCCAAGGGTCTAGATGAGGAAAGCAAGGATTACTTATCATTATATTTACTGTTAGTTTCGTGTAACAAATCCGAAGTCAGAGCCAAGTTCAAATTTTCCATATTAAATGCAAAACGTGAGGAAACCAAAGCAATGGAATCCCAGCGAGCTTACCGTTTCGTGCAGGGCAAAGATTGGGGCTTTAAGAAGTTCATACGACGCGACTTTCTATTGGACGAGGCCAACGGCCTGCTGCCCGAAGATAAACTGACAATATTCTGTGAGGTCAGCGTTGTGGCGGACAGTGTGAACATCTCTGGACAATCCAATATTGTGCAGTTCAAAGTGCCCGAGTGCAAACTCTCTGAAGATCTTGGCAATCTCTTTGACAATGAGAAATTCAGCGATGTAACGCTCTCGGTGGGCGGCCGTGAGTTTCAAGCGCACAAGGCCATACTGGCAGCGCGTAGTGATGTCTTTGCGGCCATGTTTGAGCACGAAATGGAGGAGCGCAAGCTAAATCGTGTCGCCATAACCGATGTGGATCATGAAGTGCTCAAAGAGATGCTTCGATTCATATACACGGGCAAGGCGTCTAACCTAGAAAAAATGGCTGATGATCTCTTAGCGGCTGCTGATAAGTATGCACTCGAAAAGCTGAAAGTGATGTGCGAGGAGGCGCTGTGCGTCAATCTCTCTGTAGAAACAGCAGCCGAAACGTTAATATTAGCTGATCTCCATAGTGCGGATCAATTGAAAGCACAAACGATAGATTTCATTAATACTCATGCCACCGATGTGATGGAAACCTCTGGCTGGCAAAATATGATCACAACACATTCACATTTGATAGCGGAGGCATTTCAATTATCTAAAGTAAAACTGTGGGATGAGGGGCAGATGTGA
Protein Sequence
MFEPYVKIKKKRNVHEIYQNENNIADVDVDFCNAAANFCDKRLPVNECQASQTARVTSNLHASSSTMAVSRVPSPPLPEVNTPVAENWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDNEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYTGKASNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFINTHATDVMETSGWQNMITTHSHLIAEAFQLSKVKLWDEGQM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01251946;
90% Identity
iTF_00504045; iTF_00528865; iTF_00555905; iTF_00580033; iTF_01364002; iTF_00473123; iTF_00480227; iTF_00531715; iTF_00550947; iTF_00593891; iTF_00904803; iTF_00424740; iTF_00492292; iTF_00612132; iTF_00516325; iTF_00533861; iTF_00553093; iTF_00601861; iTF_00338406; iTF_00612870; iTF_01554022; iTF_00517767; iTF_00556583; iTF_00595303; iTF_01326471; iTF_00483752; iTF_00549608; iTF_00579336; iTF_00606376; iTF_00914568; iTF_01415112; iTF_00366569; iTF_00475273; iTF_00504745; iTF_00544553; iTF_00554441; iTF_00561097; iTF_00916297; iTF_00061194; iTF_00569034; iTF_00609226; iTF_00488075; iTF_00539019; iTF_00541131; iTF_00582315; iTF_00617707; iTF_00803659; iTF_00806027; iTF_01551787; iTF_00336812; iTF_00476684; iTF_00540428; iTF_00588204; iTF_00890188; iTF_01324972; iTF_01555468; iTF_00510605; iTF_00512781; iTF_00534637; iTF_00594605; iTF_00062862; iTF_00493710; iTF_00500366; iTF_00891950; iTF_00614959; iTF_00491568; iTF_00501104; iTF_00538288; iTF_00571216; iTF_00586736; iTF_00967280; iTF_01548912; iTF_01551056; iTF_00470929; iTF_00475985; iTF_00485201; iTF_00488721; iTF_00506929; iTF_00532433; iTF_00611409; iTF_00919121; iTF_00509874; iTF_00351923; iTF_00572659; iTF_00591027; iTF_00624819; iTF_01557619; iTF_00490836; iTF_00507668; iTF_00480917; iTF_00489429; iTF_00498933; iTF_00519221; iTF_01570293; iTF_00524470; iTF_00557974; iTF_00590295; iTF_00211704; iTF_00339224; iTF_00478072; iTF_00545304; iTF_00568312; iTF_01559096; iTF_00490137; iTF_00581593; iTF_01323449; iTF_01324185; iTF_00561818; iTF_00543163; iTF_00546715; iTF_00548123; iTF_00559547; iTF_00565435; iTF_00583739; iTF_00802907; iTF_00917275; iTF_00471676; iTF_00486620; iTF_00487356; iTF_00584476; iTF_01549628; iTF_00605629; iTF_00613565; iTF_00616253; iTF_00805245; iTF_01550333; iTF_00257918; iTF_00512062; iTF_00551646; iTF_00575646; iTF_00972286; iTF_00335967; iTF_00483039; iTF_00533151; iTF_00918207; iTF_01552511; iTF_00472416; iTF_00478784; iTF_00550304; iTF_00599648;
80% Identity
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