Sjap013679.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Saturnia japonica
Gene Symbol
rdx
Assembly
GCA_033032175.1
Location
CM065313.1:12124379-12147047[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-35 2e-32 112.8 0.1 2 108 239 343 238 345 0.96

Sequence Information

Coding Sequence
ATGAGCGGATACAGTGTTGTGATGAAACTGACACAGATTCTAACGCATATTTGGCTCGGTTCAGGCAGCGAGTGTGCTGGTGGCGGGTCGGGCGGCGGCGCGCCCGCTCCGCAATCGGCGCGCGTCTCTTCGAACGGCGCCGGCGGGATGGCGGTGAGCCGCGTGCCCAGCCCCTTACACGACGGGAATACGCCCGTCGCAGAGAACTGGTGCTTCACACAAgTCAAAGTGGTTAAATTCAGTTACATGTGGacaataaacaattttagtTTTTGTAGAGAAGAAATGGGTGAAGTGTTAAAATCATCGACTTTTTCAGCAGGTGCTAGTGATAAGTTAAAATGGTGTCTGCGGGTTAATCCCAAAGGCCTCGATGAAGAAAGCAAAGACTATTTATCATTATATCTATTATTAGTGTCGTGTAATAAATCAGAAGTACGTGCAAAGTTCAAGTTCTCAATATTAAACGCAAAACGAGAAGAAACTAAAGCAATGGAGTCACAAAGAGCTTACAGATTTGTGCAGGGCAAAGATTGGGgtttcaaaaaatttataaggAGAGACTTTTTACTAGATGAAGCGAATGGGCTCTTACCCGAAGACAAGTTAACGATATTCTGCGAAGTGTCAGTGGTTGCAGACAGTATCAACATCAGTGGGCAGAGCAACGTGGTTCAATTCAAAGTGCCAGAGTGCAGGCTATCGGACGACTTAGGAGCTCTGTTTGACAACGAAAGGTTTTCTGACGTCACATTAGCAGTGGGTGGCAGGGAGTTTCAAGCACATAAAGCTATATTAGCAGCCCGAAGTCCAGTGTTTGCAGCTATGTTCGAACATGAAATGGAAGAAAGAAAACGAAACAGAGTGGACATTACAGACGTAGATCATGAAGTACTACGGGAAATGTTGCGTTTTATATACACCGGTCGAGCGCCCAACCTAGACAAGATGGCTGACGATTTATTAGCTGCCGCTGACAAATATGCGCTGGAACGGCTAAAAGTGATGTGCGAAGAGGCGTTGTGCTTAAGTTTATCTGTGGAAACGGCGGCGGACACACTGATCCTGGCAGATCTGCATTCTGCGGATCAGCTCAAGGCACAAACCATCGATTTTATAAACacAAGTCACGCAACAGACGTAATGGACACGGCGGGATGGAAGAACATGATCTCATCGCATCCGCATCTCATCGCGGAGGCGTTCCGAGCGCTCGCCACGCAGCAGCAACAGATACCGCCGATCGGTCCGCCGCGCAAACGTGTTAAACAGGCCTAA
Protein Sequence
MSGYSVVMKLTQILTHIWLGSGSECAGGGSGGGAPAPQSARVSSNGAGGMAVSRVPSPLHDGNTPVAENWCFTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGASDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSINISGQSNVVQFKVPECRLSDDLGALFDNERFSDVTLAVGGREFQAHKAILAARSPVFAAMFEHEMEERKRNRVDITDVDHEVLREMLRFIYTGRAPNLDKMADDLLAAADKYALERLKVMCEEALCLSLSVETAADTLILADLHSADQLKAQTIDFINTSHATDVMDTAGWKNMISSHPHLIAEAFRALATQQQQIPPIGPPRKRVKQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01251946;
90% Identity
iTF_00120641; iTF_01157953; iTF_00121570; iTF_01061989; iTF_01534065; iTF_01063863; iTF_00301314; iTF_01361762; iTF_01363224; iTF_00784508; iTF_00018275; iTF_00156355; iTF_00123492; iTF_00163076; iTF_00468260; iTF_01170692; iTF_01360804; iTF_00027877; iTF_00383813; iTF_00187270; iTF_01156742; iTF_01362502; iTF_01487814; iTF_01031239; iTF_00441640; iTF_00447368; iTF_00446338; iTF_00724040; iTF_00787784; iTF_01197896; iTF_01403560; iTF_01526184; iTF_01538888; iTF_00462505; iTF_00146538; iTF_00157322; iTF_00445322; iTF_00622090; iTF_01260234; iTF_00302251; iTF_00726571; iTF_01221708; iTF_00124397; iTF_00908973; iTF_00968142; iTF_01073710; iTF_01173390; iTF_00357746; iTF_01205799; iTF_00358738; iTF_00036943; iTF_00037933; iTF_00038959; iTF_00235951; iTF_00276559; iTF_00323599; iTF_00889359; iTF_00012117; iTF_00994447; iTF_00828049; iTF_01180402; iTF_00185427; iTF_00327178; iTF_00823987; iTF_01090899; iTF_01342323; iTF_00896980; iTF_01246036; iTF_00406849; iTF_00703042; iTF_00811138; iTF_00876290; iTF_00044611; iTF_00827108; iTF_00461672; iTF_00632872; iTF_01463401; iTF_01171562; iTF_00704107; iTF_00836683; iTF_01135883; iTF_00970508; iTF_00971468; iTF_01034701; iTF_01151309; iTF_00267311; iTF_00207088; iTF_00649232; iTF_00702096; iTF_00706128; iTF_00856752; iTF_01172496; iTF_00696561; iTF_00737586; iTF_00119699; iTF_01016851; iTF_00663189; iTF_00825909; iTF_00953653; iTF_01331797; iTF_00377206; iTF_00687959; iTF_00842777; iTF_01529305; iTF_00638746; iTF_00697466; iTF_00321692; iTF_01219869; iTF_00033918; iTF_01429151; iTF_01336032; iTF_01209411; iTF_00790406; iTF_00896041; iTF_00926729; iTF_00634602; iTF_01444010; iTF_00342316; iTF_00791308; iTF_00355313; iTF_01569457; iTF_00143154; iTF_00148563; iTF_00149537; iTF_00680691; iTF_00913716; iTF_00772981; iTF_00818426; iTF_00662331; iTF_00409405; iTF_00125214; iTF_00022912; iTF_00666624; iTF_01208384; iTF_00745909; iTF_01401397; iTF_00041910; iTF_00707094; iTF_00931574; iTF_00709367; iTF_00942935; iTF_01312311; iTF_01438135; iTF_00236728; iTF_01527448; iTF_01368217; iTF_00783642; iTF_00035836; iTF_00924892; iTF_00932764; iTF_01441212; iTF_01440201; iTF_00425565; iTF_00428253; iTF_01388605; iTF_01561213; iTF_00001278; iTF_01192830; iTF_01134911;
80% Identity
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