Pser008870.1
Basic Information
- Insect
- Polyplax serrata
- Gene Symbol
- Bgb
- Assembly
- GCA_037055365.1
- Location
- JAWJWE010000038.1:9696088-9699911[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-51 5.6e-47 158.9 0.1 1 98 33 129 33 132 0.92
Sequence Information
- Coding Sequence
- ATGCATACGATGAATGATCCGAGCGCCCTGGCGGGCATGCTACCTTTCGATACCATCGGGCTATACGAACAGCCCAAGCCGAggtttatatttaaaatgccGCGAGTAGTACCCGATCAAAAATCTAAGTTCGAATCGGATGAATTATTTAGGAGATTAAGTCGCGAAAGCGAGGTCAGATATACAGGCTACAGAGACAGACCACAGGAAGAACGACAGGTTCGATTTCAAAACGGATGTCGCGAAGGACACACAGAAATCGCGTTCGTCGCAACTGGAACGAATATACAACTGGTGTTCAATCCGGCCTCGAATGGCTACAGTACCGTGGACCTGGGTAGAGAATGCGATTTCGATAAAGAACACGGAAAGGTGAGTCTGAGAATACCCGTCTCTGGCGAAAGCACCATGTGA
- Protein Sequence
- MHTMNDPSALAGMLPFDTIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRDRPQEERQVRFQNGCREGHTEIAFVATGTNIQLVFNPASNGYSTVDLGRECDFDKEHGKVSLRIPVSGESTM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00994977;
- 90% Identity
- iTF_00994977; iTF_01410533; iTF_01445415; iTF_01450233; iTF_01164687; iTF_00993264; iTF_01447250; iTF_00678264; iTF_00894521;
- 80% Identity
- iTF_01164687;