Mvio037726.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- Bgb
- Assembly
- GCA_030762175.1
- Location
- CM060842.1:15092220-15123916[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-50 1.5e-45 156.7 0.4 1 96 30 124 30 129 0.94 2 2 0.22 7.3e+03 -1.7 0.0 125 138 128 141 124 147 0.63
Sequence Information
- Coding Sequence
- ATGCACGACCCCACCGCATTGGCGGGCATGTTGCCCTTCGACTCCATCGGACTGTACGAGCAACCTAAGCCCCGCTTCATCTTCAAGATGCCCCGCGTCGTTCCTGACCAGAAGTCCAAGTTCGAATCCGACGAGCTCTTCCGCAGACTCAGCCGCGAGAGCGAGGTGAGGTACACGGGATACCGCGATCGACCCCAGGAAGAGCGTCAAGTTCGCTTCCAGAACGGCTGTCGTGAAGGGCATACGGAAATTGCCTTTGTGGCTACTGGTACGAACATACAACTGGTATTCAACCCCAGCACAAACGGTTACAGCACGTCAGACCACGGCCGGGAATGCGACTTCGACAAGGAACACGGCAAAGCCTTCCTCTGTGGTGATGAATTCGACAGCCAAAAGCAACAACAGGAAAGGACAAAGCGGGAAATGCAGAGTAATTTAGCAGGGAAGCCCTAA
- Protein Sequence
- MHDPTALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRDRPQEERQVRFQNGCREGHTEIAFVATGTNIQLVFNPSTNGYSTSDHGRECDFDKEHGKAFLCGDEFDSQKQQQERTKREMQSNLAGKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01410533; iTF_00993264; iTF_00283089; iTF_00894521; iTF_01059515; iTF_01059516; iTF_01455425; iTF_01459238; iTF_01164687; iTF_01250843; iTF_00241929; iTF_01131988; iTF_00138998; iTF_00731225; iTF_00883551; iTF_01383392;
- 90% Identity
- iTF_01250843;
- 80% Identity
- -