Tgen025418.1
Basic Information
- Insect
- Timema genevievae
- Gene Symbol
- Bgb
- Assembly
- GCA_902155825.1
- Location
- CABFWO010001988.1:71301-89120[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-49 5.3e-45 155.1 0.7 1 93 33 124 33 130 0.97
Sequence Information
- Coding Sequence
- ATGCACGCCATGAACGACCCCGCGGCTCTTGCCGGCATGCTGCCGTTCGACTCTATCGGACTGTACGAGCAGCCCAAGCCGAGGTTCATCTTCAAGATGCCGCGTGTCGTCCCAGACCAGAAGTCCAAGTTCGAGTCTGATGAGCTTTTCCGGCGGCTCAGTCGAGAGAGCGAGGTCCGGTACACGGGGTACAGGGACAGACCCCAGGAAGAGAGGCAGGTCAGGTTCCAAAATGGCTGCCGGGAAGGACACACGGAGATCGCGTTCGTGGCGACAGGCACGAATATCCAACTGGTGTTCAATCCCAGCACCAATGGGTACAGCACAGCGGACCCAGGCAGAGAATGTGACTTCGACAAGGAACATGGAAAGAAGAGAGAGGGCGACCGAGCCAGCGTGGCCGGTGGGCTGACGCCGACGATGAAGACATCAGGGGGCGTGCGAGGGTCTCGTGCCACGGCTTGA
- Protein Sequence
- MHAMNDPAALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRDRPQEERQVRFQNGCREGHTEIAFVATGTNIQLVFNPSTNGYSTADPGRECDFDKEHGKKREGDRASVAGGLTPTMKTSGGVRGSRATA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01449234;
- 90% Identity
- iTF_01250843;
- 80% Identity
- -