Basic Information

Insect: Polyommatus iphigenia
Gene Symbol: -
Assembly: GCA_963422495.1
Location: OY730180.1:28044205-28052409[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.3e-06 0.0006 21.1 3.6 1 23 170 192 170 192 0.98

2 14 8.3e-05 0.0079 17.6 0.6 2 23 266 287 266 287 0.97

3 14 3.6e-06 0.00034 21.9 0.8 2 21 295 314 294 315 0.93

4 14 8e-06 0.00076 20.8 1.0 1 23 345 367 345 367 0.98

5 14 4.2e-06 0.0004 21.7 0.4 2 23 411 432 410 432 0.97

6 14 3.8e-05 0.0036 18.7 2.3 2 23 440 461 439 461 0.96

7 14 8.2e-05 0.0078 17.6 2.6 1 23 466 488 466 488 0.97

8 14 1.3e-05 0.0012 20.1 0.3 2 23 493 515 492 515 0.94

9 14 1.7e-05 0.0016 19.8 3.7 1 23 521 543 521 543 0.96

10 14 0.00031 0.03 15.8 0.2 3 23 551 571 549 571 0.94

11 14 2.7e-05 0.0026 19.1 4.0 1 23 577 599 577 599 0.98

12 14 7.9e-06 0.00075 20.8 5.8 1 23 605 627 605 627 0.98

13 14 2.8e-06 0.00026 22.3 0.7 1 23 633 655 633 655 0.99

14 14 0.0014 0.13 13.7 5.4 1 23 661 683 661 683 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.3e-06	0.0006	21.1	3.6	1	23	170	192	170	192	0.98
2	14	8.3e-05	0.0079	17.6	0.6	2	23	266	287	266	287	0.97
3	14	3.6e-06	0.00034	21.9	0.8	2	21	295	314	294	315	0.93
4	14	8e-06	0.00076	20.8	1.0	1	23	345	367	345	367	0.98
5	14	4.2e-06	0.0004	21.7	0.4	2	23	411	432	410	432	0.97
6	14	3.8e-05	0.0036	18.7	2.3	2	23	440	461	439	461	0.96
7	14	8.2e-05	0.0078	17.6	2.6	1	23	466	488	466	488	0.97
8	14	1.3e-05	0.0012	20.1	0.3	2	23	493	515	492	515	0.94
9	14	1.7e-05	0.0016	19.8	3.7	1	23	521	543	521	543	0.96
10	14	0.00031	0.03	15.8	0.2	3	23	551	571	549	571	0.94
11	14	2.7e-05	0.0026	19.1	4.0	1	23	577	599	577	599	0.98
12	14	7.9e-06	0.00075	20.8	5.8	1	23	605	627	605	627	0.98
13	14	2.8e-06	0.00026	22.3	0.7	1	23	633	655	633	655	0.99
14	14	0.0014	0.13	13.7	5.4	1	23	661	683	661	683	0.97

Sequence Information

Coding Sequence: ATGGATTTGCTGGCTGCTAAAGACCTGCCGTGTATAAATGACCGCTGCCGAACATGTATGATAAGAATTTTCACTGGAATCCCAGCAGTTAACATTTTTGAAcgaaacatacaaaatattagtATAGCCGAAATTCTTCACTCCTTTACTACTCTCACTttTGATGCTAACGATCAACTGCCGAAAGTTGTCTGCCAGCTGTGTTATGAAAAGCTCAACAGTTTTTATCAATTTATACTGTACATAGAAAATGTTGATATAAAATTTAAGGCAGAGCTCCAAGGAAAAGATAATTTGCCTTCtaaagatttattaaaaaataatttgaatgtaAAAGATGTACGAGTAgaagataatttattaaaaggaAATGAAAGAGattcaattaaaaaagaaatttcTGAACATGATTATGTTGCATTAGGTGCAGAAGACATTCTAGTAGGTTTAGGTGATAATACAGAATTGAATAATCCATGTGCTCCAAAATGTGAAATAGTACAAGAATTTGTGTGTAAAATATGCTACAAATACTTTAGTAACAAGGGAAACTATCAAAGGCATCTTAAGAAACATtcagatttttcacaaaatattgaAGAATCTATGTTAACTGTGTCTACCAGTAGTGTAAGTAATAGAATAAGCCAAGACGAACATTCTCCCGAGGAAAGTTCTATTGTAATAGAAGTTATTCCTCCAGAAGCCGACATAAATTCAGATGAAGAAGCTGATAATGatatgaaatataattttaaaaaggaACAAATAGAAACTGCTGGTAATGATGGTAATGTTTGTGAAATTTGCAACACACAATTTCAGAACAAATATTCTATGGCTGCACATATGCGGAAACATGTGGTAAAGGGAAGGGTACTGTCGTGTCCAACTTGCGGTAAGGTATTCAGAAAAGTCAGCCATTTAAAACGGCACCAGCTTTCCGGGCGGAAAAAAGGGACAAAATGTCATTCAATGCAAACGACATGCGGTAATGTGAACAATGTTACCTCTATAGATATTAAAGGTGAATTTAATTGTGAAATTTGTGGACGAAGTTTCAAAAGTAAAGTTGCTAAGTCTTTGCATATGCGGACACATGTCGAGAAAGGGACAGATCTATCACAGTCAACAAGCAGTGAAATTATCAAGACAGAAATTGAAGTTGAAGGAAATTATGAAATTCAGGAAGCAAATGACAATTTAGACAGTGCTGAAGATGGTGATATTCCTTGTGAAATTTGTAAGAAGATATTCAAAAGTAAATTTTCATTAGCCGCTCATTTGAGAAAACATACTGAAAGGAAGAGAATGCTATCATGTTCGAAATGTGGCAAAGTATTCAGTAAAGTCAGTCATGTCAAACGACATGAACTAACACACGAAGAAAAAGCTTATAGGTGTAGTTTATGTAAAAAGTCTTTTGCCACCAGAGAACTCTTCCGACAGCATTTGACACAGCATAATGAAGCAAAAGTGTGTCCTGTATGTCAGAAAAAGTTTGCCACCAAGTCAACACTCAGTGCACATATTTCACAAGTACATACTCGTAAAAACATGTATCTATGTTCGTACTGCGGCAAGAAGTTTGATTCTACTTCTAATTTAAACCAACACCACCTAAGGCATATAGGTATAAAAAATTGGGCCTGTTCtctttgtccaaaaaaatttgttaGCAAGGGAGAACTAACGTCACACAGTAGTATCCATATTGGGGAAAAGCCTCACAAATGTAAGCAGTGTAACACAGCATTCACCAAAAAGAGCTCGGTCATCAAGCACATGAAAATACATCAAGGCATCAAGCCATTCGAGTGTGATACATGTCATAAGAAATTCAGAACCAATTATTCTCTAAAAACCCACTACCGTATCCATACGGGGGAGAAGCCATATGTATGTGAGATCTGTACTCAGGCGTTCACACAGAGCAACGACCTTGTCAAACACCGCAGAAAGCATCTTGGTGAAAAGTTGTTCAAATGTGACCATTGCACGGAGAGTTTCCGACTCAAGACCGAGTTGTCACATCACATCACTCAGCACTACGCCGCTAAACTACAACAAACTGACATGGCCGACCAGAGAACAGATGTCATACAAACTAATGCCTTGGATGGTTGA
Protein Sequence: MDLLAAKDLPCINDRCRTCMIRIFTGIPAVNIFERNIQNISIAEILHSFTTLTFDANDQLPKVVCQLCYEKLNSFYQFILYIENVDIKFKAELQGKDNLPSKDLLKNNLNVKDVRVEDNLLKGNERDSIKKEISEHDYVALGAEDILVGLGDNTELNNPCAPKCEIVQEFVCKICYKYFSNKGNYQRHLKKHSDFSQNIEESMLTVSTSSVSNRISQDEHSPEESSIVIEVIPPEADINSDEEADNDMKYNFKKEQIETAGNDGNVCEICNTQFQNKYSMAAHMRKHVVKGRVLSCPTCGKVFRKVSHLKRHQLSGRKKGTKCHSMQTTCGNVNNVTSIDIKGEFNCEICGRSFKSKVAKSLHMRTHVEKGTDLSQSTSSEIIKTEIEVEGNYEIQEANDNLDSAEDGDIPCEICKKIFKSKFSLAAHLRKHTERKRMLSCSKCGKVFSKVSHVKRHELTHEEKAYRCSLCKKSFATRELFRQHLTQHNEAKVCPVCQKKFATKSTLSAHISQVHTRKNMYLCSYCGKKFDSTSNLNQHHLRHIGIKNWACSLCPKKFVSKGELTSHSSIHIGEKPHKCKQCNTAFTKKSSVIKHMKIHQGIKPFECDTCHKKFRTNYSLKTHYRIHTGEKPYVCEICTQAFTQSNDLVKHRRKHLGEKLFKCDHCTESFRLKTELSHHITQHYAAKLQQTDMADQRTDVIQTNALDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01217677; iTF_00164570; iTF_00934043; iTF_00404020;
90% Identity: iTF_00164570;
80% Identity: -