Basic Information

Insect: Aricia agestis
Gene Symbol: -
Assembly: GCA_905147365.1
Location: LR990272.1:3134454-3140422[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.7e-06 0.00019 22.1 3.3 1 23 169 191 169 191 0.98

2 14 0.00011 0.0077 17.1 0.9 2 23 266 287 265 287 0.97

3 14 3.2e-06 0.00022 21.9 0.8 2 21 295 314 294 315 0.93

4 14 0.00024 0.017 16.0 0.9 1 23 346 368 346 368 0.97

5 14 3.7e-06 0.00026 21.7 0.4 2 23 412 433 411 433 0.97

6 14 3.3e-05 0.0024 18.7 2.3 2 23 441 462 440 462 0.96

7 14 5.5e-05 0.0039 18.0 2.8 1 23 467 489 467 489 0.97

8 14 4.4e-06 0.00031 21.4 0.3 2 23 494 516 493 516 0.94

9 14 1.5e-05 0.0011 19.8 3.7 1 23 522 544 522 544 0.96

10 14 0.00027 0.019 15.8 0.1 3 23 552 572 550 572 0.94

11 14 2.4e-05 0.0017 19.1 4.0 1 23 578 600 578 600 0.98

12 14 7e-06 0.00049 20.8 5.8 1 23 606 628 606 628 0.98

13 14 2.4e-06 0.00017 22.3 0.7 1 23 634 656 634 656 0.99

14 14 0.0005 0.035 15.0 5.5 1 23 662 684 662 684 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.7e-06	0.00019	22.1	3.3	1	23	169	191	169	191	0.98
2	14	0.00011	0.0077	17.1	0.9	2	23	266	287	265	287	0.97
3	14	3.2e-06	0.00022	21.9	0.8	2	21	295	314	294	315	0.93
4	14	0.00024	0.017	16.0	0.9	1	23	346	368	346	368	0.97
5	14	3.7e-06	0.00026	21.7	0.4	2	23	412	433	411	433	0.97
6	14	3.3e-05	0.0024	18.7	2.3	2	23	441	462	440	462	0.96
7	14	5.5e-05	0.0039	18.0	2.8	1	23	467	489	467	489	0.97
8	14	4.4e-06	0.00031	21.4	0.3	2	23	494	516	493	516	0.94
9	14	1.5e-05	0.0011	19.8	3.7	1	23	522	544	522	544	0.96
10	14	0.00027	0.019	15.8	0.1	3	23	552	572	550	572	0.94
11	14	2.4e-05	0.0017	19.1	4.0	1	23	578	600	578	600	0.98
12	14	7e-06	0.00049	20.8	5.8	1	23	606	628	606	628	0.98
13	14	2.4e-06	0.00017	22.3	0.7	1	23	634	656	634	656	0.99
14	14	0.0005	0.035	15.0	5.5	1	23	662	684	662	684	0.97

Sequence Information

Coding Sequence: ATGGATTTGCTGGCTGCTAAAGACCTGCCGTGTATAAATGACCGCTGTCGAACATGTATGATAAGAATTTTCACTGGAATCCCTGCAGTTAATATTTTTGAGCGAAACGTACAAAACATTAGTATTGCTGAAATTCTTCACTCCTTTACTGCTCTCACTTTTGATGCAAACGATCAGCTGCCGAAAGCAGTCTGCCAGCTGTGTTATGAAAAGCTCAACAGTTTTTATCAATTTGTACTGTACATAGAAAATGTTGACATAAAATTTAAGGCAGAGCTCCAAGGAAAAGATAATTTGCCTTCTAAAGATATAATGAAAAATAATTTGAATTTAAAAGATGTATCAGCAAAAGATAACTTATCACAAGAAAATGAAGGAGATTCAATTAAAAAAGAAATTTCTGAAGATTATGTTGGCTTAGGTGCAGAAGACATTCTAGTAGGCTTAGGTGATGATACAGAATTGAATAATCCATGTGCTCCAAAATGTGAAATAGTACAAGAATTTGTGTGTAAAATATGCTACAAATACTTTAGTAACAAGGGAAACTATCAAAGGCATATTAAGAAACATTCAAATTTTTCACAAAATATTGAAGAATCTATGTTTACTGTGCCTACCAGTAGTGTAAGTAATAGAATAAGCCATGAGGAACATTATTCCGAGGAAAGTTCTATTGTAATAGAAGTTATTCCTCCAGAAGCCAACATAAATTCAGATGATGAAGAAGCTGATAATCATATTAAATATAATTTAAAAAAAGAACAAATAGAAACCGCTGGTAATGAGGGTACTGTTTGTGAAATTTGCAAAACACAATTCCAGAACAAATATTCTATGGCTGCACATATGCGGAAACATGTAGTAAAGGGAAGGGTACTGTCGTGTCCAACTTGTGGCAAGGTATTCAGAAAAGTCAGCCATTTAAAACGGCACCAGCTTTCCGGACGGAAAAAAGGGACAAAATGTCATTCAATGCAAACAACGACATGTGGTAATGTGAACAATGTCACCTCTATAGATATTAAAGGTGAATTTAATTGTGAAATTTGTGGACAAAGTTTCAAAACTAAAGTTGCAAAGTCTTTGCATACGCAGACACATGTTGAGAAAGGGACAGATCTGTCGCAGTCAACAAGCAGTGAAATGATCAAAACAGAAATTGAAGTTGAAAGAAATTATGAAATTCAAGATGCGAATGACAAATTAGACGGTGCTGAAGAAGGTGATATTCCTTGTGAAATTTGTAAGAAGATATTCAAAAGTAAATTTTCATTAGCTGCTCATTTGAGAAAACATACTGAAAGGAAGAGAATGCTATCATGTTCAAAATGTGGGAAAGTGTTCAGTAAAGTCAGTCATGTCAAACGACACGAGCTAACACACGAAGAAAAAGCTTATAAGTGTAGTTTATGTAAAAAGTCTTTTGCCACCAGAGAACTCTTCCGACAGCATTTGACACAGCATAACGAAGCAAAAGTGTGTCCTGTATGTCAGAAAAAATTTGCCACCAAGTCAACACTCAATGCACATATTTCACAAGTACATAATCATAAAAACATGTATCTATGTTCGTACTGCGGCAAGAAGTTTGATTCTACTTCTAATTTAAATCAACACCACCTAAGGCATATAGGTATAAAAAATTGGGCCTGTTCTCTTTGTCCAAAAAAATTTGTTAGCAAGGGAGAACTAACGTCACACGGTAGTATCCATATTGGGGAAAAGCCTCACAAATGTAAGCAGTGTAATACAGCATTCACCAAAAAGAGCTCGGTCATCAAGCACATGAAAATACATCAAGGCATCAAGCCGTTTGAGTGTGACACATGTCATAAGAAATTCAGAACCAATTATTCTCTAAAAACCCACTACCGTATCCATACGGGGGAGAAGCCGTATGTATGTGAAATCTGTACTCAAGCGTTCACACAGAGCAACGACCTGGTCAAACACCGTAGGAAGCACCTTGGTGAAAAGTTGTTTAAATGTGATCATTGCACGGAGAGTTTCCGTCTCAAGACTGAGCTGACGCATCACATCACTCAGCACTACGCTGCTAAGCTACAACAAACTGACATGGCCGCAGAGCGAATAGAAACTAATGCCATGAATGGTTGA
Protein Sequence: MDLLAAKDLPCINDRCRTCMIRIFTGIPAVNIFERNVQNISIAEILHSFTALTFDANDQLPKAVCQLCYEKLNSFYQFVLYIENVDIKFKAELQGKDNLPSKDIMKNNLNLKDVSAKDNLSQENEGDSIKKEISEDYVGLGAEDILVGLGDDTELNNPCAPKCEIVQEFVCKICYKYFSNKGNYQRHIKKHSNFSQNIEESMFTVPTSSVSNRISHEEHYSEESSIVIEVIPPEANINSDDEEADNHIKYNLKKEQIETAGNEGTVCEICKTQFQNKYSMAAHMRKHVVKGRVLSCPTCGKVFRKVSHLKRHQLSGRKKGTKCHSMQTTTCGNVNNVTSIDIKGEFNCEICGQSFKTKVAKSLHTQTHVEKGTDLSQSTSSEMIKTEIEVERNYEIQDANDKLDGAEEGDIPCEICKKIFKSKFSLAAHLRKHTERKRMLSCSKCGKVFSKVSHVKRHELTHEEKAYKCSLCKKSFATRELFRQHLTQHNEAKVCPVCQKKFATKSTLNAHISQVHNHKNMYLCSYCGKKFDSTSNLNQHHLRHIGIKNWACSLCPKKFVSKGELTSHGSIHIGEKPHKCKQCNTAFTKKSSVIKHMKIHQGIKPFECDTCHKKFRTNYSLKTHYRIHTGEKPYVCEICTQAFTQSNDLVKHRRKHLGEKLFKCDHCTESFRLKTELTHHITQHYAAKLQQTDMAAERIETNAMNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01248391;
90% Identity: iTF_01217677; iTF_00934043; iTF_00404020; iTF_01248391;
80% Identity: -