Basic Information

Insect: Cyaniris semiargus
Gene Symbol: -
Assembly: GCA_905187585.1
Location: LR994563.1:3343123-3349298[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.6e-06 0.0002 22.1 3.5 1 23 170 192 170 192 0.98

2 14 5.8e-05 0.0044 17.8 0.7 2 23 267 288 266 288 0.97

3 14 3e-06 0.00023 21.9 0.8 2 21 296 315 295 316 0.93

4 14 5e-06 0.00038 21.2 1.1 1 23 347 369 347 369 0.98

5 14 3.5e-06 0.00027 21.7 0.4 2 23 413 434 412 434 0.97

6 14 3.2e-05 0.0024 18.7 2.3 2 23 442 463 441 463 0.96

7 14 2.5e-05 0.0019 19.0 2.4 1 23 468 490 468 490 0.97

8 14 4.2e-06 0.00032 21.4 0.3 2 23 495 517 494 517 0.94

9 14 1.4e-05 0.0011 19.8 3.7 1 23 523 545 523 545 0.96

10 14 0.00026 0.02 15.8 0.2 3 23 553 573 551 573 0.94

11 14 2.3e-05 0.0017 19.1 4.0 1 23 579 601 579 601 0.98

12 14 4.7e-06 0.00035 21.3 5.7 1 23 607 629 607 629 0.99

13 14 2.3e-06 0.00018 22.3 0.7 1 23 635 657 635 657 0.99

14 14 0.00048 0.036 15.0 5.5 1 23 663 685 663 685 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.6e-06	0.0002	22.1	3.5	1	23	170	192	170	192	0.98
2	14	5.8e-05	0.0044	17.8	0.7	2	23	267	288	266	288	0.97
3	14	3e-06	0.00023	21.9	0.8	2	21	296	315	295	316	0.93
4	14	5e-06	0.00038	21.2	1.1	1	23	347	369	347	369	0.98
5	14	3.5e-06	0.00027	21.7	0.4	2	23	413	434	412	434	0.97
6	14	3.2e-05	0.0024	18.7	2.3	2	23	442	463	441	463	0.96
7	14	2.5e-05	0.0019	19.0	2.4	1	23	468	490	468	490	0.97
8	14	4.2e-06	0.00032	21.4	0.3	2	23	495	517	494	517	0.94
9	14	1.4e-05	0.0011	19.8	3.7	1	23	523	545	523	545	0.96
10	14	0.00026	0.02	15.8	0.2	3	23	553	573	551	573	0.94
11	14	2.3e-05	0.0017	19.1	4.0	1	23	579	601	579	601	0.98
12	14	4.7e-06	0.00035	21.3	5.7	1	23	607	629	607	629	0.99
13	14	2.3e-06	0.00018	22.3	0.7	1	23	635	657	635	657	0.99
14	14	0.00048	0.036	15.0	5.5	1	23	663	685	663	685	0.97

Sequence Information

Coding Sequence: ATGGATTTGCTGGCTGCTAAAGACCTGCCGTGTATAAATGACCGCTGTCGAACATGTATGATAAGAATTTTCACTGGAATCCCTGCAGTTAACATTTTTGAGCGAAACATACAAAACATTAGTATAGCTGAAATTCTTCACTCCTTTACTGCTCTTACTTTTGATGCAAACGATCAACTGCCGAAAGCAGTCTGCCAGCTGTGTTATGAAAAGCTCAACAGTTTTTATCAATTTGTACTGTACATAGAAAATGTTGATATAAAATTTAAGGCAGAGCTCCAAGGAAAAGATAATTTGCCTTCTAAAGATTTAATTAAAAATAATTTGAATGTAAAAGATGTACCAGTAGAAGAAAATTTATTAAAAGAAAATGAAGGAGATTCAATTAAAAAAGAAATTTCTGAACATGATTATGTTGCATTAGGTGCAGAAGACATTCTAGTAGGTTTAGGTGATAATATAGAATTGATTGATCCATGTGCTCCAAAATGTGAAATAGTACAAGAATTTGAATGCAAAATATGTTACAAATACTTTAGTAACAAGGGAAACTATCAAAGGCATATTAAGAAACATTCAGATTTTTCACAAAATATTGAAGAATCTATGTTAACCGTGCCTACCAGTAGTGTAAGTAATAGAATAAGCCATGAGGAACATTCTTCCGAGGAAAGTTCTATTGTAATAGAAGTTATTCCTCCAGAAGCCAACATAAATTCAGATGATGAAGAAGCTGATAATGATATTAAATATAATTTTAAAAAGGAACAAATAGAAACTGCTGGTAATGAGGGTACTGTTTGTGAAATTTGCAACACACAATTCCAGAACAAATATTCTATGGCTGCACATATGCGGAAACATGTGGTAAAGGGAAGGGTACTGTCGTGTCCGACTTGCGGCAAGGTATTCAGAAAAGTCAGCCATTTAAAACGGCACCAGCTTTCCGGACGGAAAAAAAGGACAAAATGTCATTCAATGCAAACAACAACATGTGGCAATGTGAACAATGTTACCTCTATAGATATTAAAGGTGAATTTAATTGTGAAATTTGTGGACGAAGTTTCAAAACTAAAGTTGCAAAGTCTTTGCATATGCGGACACATGTTGAGAAAGGGATAGATTCATCACAGTCAACAAGCAGTGAAATGATCAAGACAGAAATTGAAATTGAAAGAAATTGTGAAATTCAAGATACAAATGACAATTTAGATGGTGCTGAAGAAGGTGATATTCCATGTGAAATTTGTAAGAAGATATTCAAAAGTAAATTTTCATTAGCTGCTCATTTGAGAAAACATACTGAAAGGAAGAGAATGCTATCATGTTCAAAATGTGGCAAAGTATTCAGTAAAGTCAGTCATGTCAAACGACATGAGCTGACACATGAAGAAAAAACTTATAAGTGTAGTTTATGTAATAAGTCTTTTGCCACCAGAGAACTCTTCCGACAGCATTTGACACAGCATAATGAAGCAAAAGTGTGTCCTGTATGTCAAAAAAAATTTGCCACCAAGTCAACACTCAATGCACATATTTCACAAGTACATACTCATAAAAACATGTATCTATGTTCGTACTGCGGCAAGAAGTTTGATTCTACTTCTAATTTAAATCAACACCACCTAAGGCATATAGGTATAAAAAATTGGGCCTGTTCTCTTTGTCCAAAAAAATTTGTTAGCAAGGGAGAACTAACGTCACACAGTAGTATCCATATTGGGGAAAAGCCTCACAAATGTAAGCAGTGTAACACAGCATTCACCAAAAAGAGCTCGGTCATCAAGCACATGAAAATACATCAAGGCATCAAGCCATACGAGTGTGATACATGTCATAAGAAATTCAGAACCAATTATTCTCTAAAAACCCACTACCGTATCCATACGGGAGAGAAGCCGTATGTATGTGAGATCTGTACCCAAGCGTTCACACAGAGCAACGACTTAGTCAAACACCGCAGGAAGCACCTTGGCGAAAAGTTGTTCAAATGTGACCATTGCACGGAGAGTTTCCGTCTCAAGACCGAGCTGACACATCACATCACTCAGCACTACGCCGCTAAACTACAACAAACTAACATGGCAGACCAGCGAACAGATGTCATAGAAACTAATGCCTTGGATGGTTGA
Protein Sequence: MDLLAAKDLPCINDRCRTCMIRIFTGIPAVNIFERNIQNISIAEILHSFTALTFDANDQLPKAVCQLCYEKLNSFYQFVLYIENVDIKFKAELQGKDNLPSKDLIKNNLNVKDVPVEENLLKENEGDSIKKEISEHDYVALGAEDILVGLGDNIELIDPCAPKCEIVQEFECKICYKYFSNKGNYQRHIKKHSDFSQNIEESMLTVPTSSVSNRISHEEHSSEESSIVIEVIPPEANINSDDEEADNDIKYNFKKEQIETAGNEGTVCEICNTQFQNKYSMAAHMRKHVVKGRVLSCPTCGKVFRKVSHLKRHQLSGRKKRTKCHSMQTTTCGNVNNVTSIDIKGEFNCEICGRSFKTKVAKSLHMRTHVEKGIDSSQSTSSEMIKTEIEIERNCEIQDTNDNLDGAEEGDIPCEICKKIFKSKFSLAAHLRKHTERKRMLSCSKCGKVFSKVSHVKRHELTHEEKTYKCSLCNKSFATRELFRQHLTQHNEAKVCPVCQKKFATKSTLNAHISQVHTHKNMYLCSYCGKKFDSTSNLNQHHLRHIGIKNWACSLCPKKFVSKGELTSHSSIHIGEKPHKCKQCNTAFTKKSSVIKHMKIHQGIKPYECDTCHKKFRTNYSLKTHYRIHTGEKPYVCEICTQAFTQSNDLVKHRRKHLGEKLFKCDHCTESFRLKTELTHHITQHYAAKLQQTNMADQRTDVIETNALDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01248391;
90% Identity: iTF_00164570;
80% Identity: -