Basic Information

Insect: Plebejus argus
Gene Symbol: -
Assembly: GCA_905404155.1
Location: FR989943.1:10835108-10839853[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.5e-06 0.00019 22.1 3.3 1 23 169 191 169 191 0.98

2 14 0.00094 0.071 14.0 0.5 2 23 264 285 263 285 0.97

3 14 3.2e-06 0.00024 21.8 0.4 2 21 293 312 292 313 0.93

4 14 0.00014 0.01 16.6 0.5 1 23 344 366 344 366 0.97

5 14 0.0011 0.081 13.8 1.6 2 23 410 431 409 431 0.97

6 14 3.1e-05 0.0023 18.7 2.3 2 23 439 460 438 460 0.96

7 14 5.1e-05 0.0038 18.0 2.8 1 23 465 487 465 487 0.97

8 14 5.5e-06 0.00041 21.0 0.3 2 23 492 514 491 514 0.94

9 14 1.4e-05 0.0011 19.8 3.7 1 23 520 542 520 542 0.96

10 14 0.00026 0.019 15.8 0.2 3 23 550 570 548 570 0.94

11 14 3.6e-06 0.00027 21.6 5.6 1 23 576 598 576 598 0.98

12 14 3.4e-06 0.00026 21.7 5.5 1 23 604 626 604 626 0.99

13 14 2.3e-06 0.00017 22.3 0.7 1 23 632 654 632 654 0.99

14 14 0.0014 0.1 13.5 5.7 1 23 660 682 660 682 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.5e-06	0.00019	22.1	3.3	1	23	169	191	169	191	0.98
2	14	0.00094	0.071	14.0	0.5	2	23	264	285	263	285	0.97
3	14	3.2e-06	0.00024	21.8	0.4	2	21	293	312	292	313	0.93
4	14	0.00014	0.01	16.6	0.5	1	23	344	366	344	366	0.97
5	14	0.0011	0.081	13.8	1.6	2	23	410	431	409	431	0.97
6	14	3.1e-05	0.0023	18.7	2.3	2	23	439	460	438	460	0.96
7	14	5.1e-05	0.0038	18.0	2.8	1	23	465	487	465	487	0.97
8	14	5.5e-06	0.00041	21.0	0.3	2	23	492	514	491	514	0.94
9	14	1.4e-05	0.0011	19.8	3.7	1	23	520	542	520	542	0.96
10	14	0.00026	0.019	15.8	0.2	3	23	550	570	548	570	0.94
11	14	3.6e-06	0.00027	21.6	5.6	1	23	576	598	576	598	0.98
12	14	3.4e-06	0.00026	21.7	5.5	1	23	604	626	604	626	0.99
13	14	2.3e-06	0.00017	22.3	0.7	1	23	632	654	632	654	0.99
14	14	0.0014	0.1	13.5	5.7	1	23	660	682	660	682	0.96

Sequence Information

Coding Sequence: ATGGATTTGCTGGCTGCTAAGGACCTGCCGTGTCTAAATGACCGCTGTCGAACATGTATGATAAGAATTTTCACAGGAATCCCTGCAGTTAACATTTTTGAGCGAAACATACAAAACATTAGTATAGCTGAAATTCTTCACTCCTTTACTGCTCTCACTTTTGATGCAAACGATCAACTGCCGAAAGTTGTCTGCCAGCTGTGTTATGAAAAACTCAACAGTTTTTATCAATTTGTACAGTACATAGAAAATGTTGACATAAAATTTAAAGCAGAGCTCCAAGGAAAAGATCATTTGCCTTCTAAAAATTTAATAATAAATAATTTGAATTTAGAAGATGTATCAGTAAAAGACTATTTATCACAAGAAAATGAAGGAGATTCAATTAAAAAAGAATTTTCTGAAGGTTATGTTGCATTAGGTGCAGAAGACATTCTAGTAGGTTTAGGTCATAATACAGAATTGAATAATCCATATGCTCCGAAATATGAAATAGTACAAGAATTTGTGTGTAAAATATGCTACAAATACTTTAGTAACAAGGGAAACTATCAAAGGCATATTAAGAAACATTCCGATTTTACACAAAATATTGAAGAATCTATGTTAACTGTGCCTACCAGTAGTGTAAGTAATAGAACAAGCCATGAGGAACATTCTTACGAGGAAAGATCTATTGTAATAGAAGTTATGCCCCCAGAAGACAACATAAATTCAGATGATGAAGTAGCTGATAATGACACAAAATATAATCTTAAAAAGGAACACACTGCTGGTAATGAGGGCACTGTTTGTGAAATTTGCAACGCACAATTCCAGAACAAGTATTCTAGGGCCGCACATATGCGGAAACATGTGGTAAAGGGAAGAGTACTGTCGTGTCCAACTTGCGGCAAGGTATTCAGAAAAGTCAGCCATTTAAAACGGCATCAGCTTGCCGGACGGAAAAAAAAGACAAAATGTCACCCAATGCAAAAAACGACATGTGGCAATGTGAACAATGTTACCTCTATAGATATTAAAGGTGAATTTAATTGTGAAATTTGTGGACAAAGTTTCAAAACTAAAGTTGCAAAGTCTATGCATATGGGGACACATGTCGAGAAAGGGACAGATCTATCACAGTCAACAAGCAGTGACATAATCAAGACAGAAATTGAAGTTGAAAGAAATTATGAAATGCAAGATGCAAATGACAATTTAGATGGTGCCGAAGAAGGTGATATTCCTTGTGAAATTTGTAAGAAGATATTCAAATGTAAATTTTCATTAGCTGCTCATTTGAGAAAACATACTGAAAGGAAGAGAATGCTATCATGTTCAAAATGTGGCAAAGTATTTAGTAAAGTCAGTCATGTTAAACGACATGAGCTAACACACGAAGAAAAAACTTATAAGTGTAGTTTATGTAAAAAGTCTTTTGCTACCAGAGAACTCTTCCGACAGCATTTGACACAGCATAATGAAGCCAAAGAGTGTCCCATTTGTCAGAAAAAATTTGCCACCAAGTCAACACTCAGTGCACATATTTCACAAGTACATACTCATAAAAACATGTATCTATGTTCGTACTGCGGCAAGAAGTTTGATTCTACTTCTAATTTAAACCAACATCACCTAAGGCATATAGGTATAAAAAATTGGGCCTGTTCTCTTTGTCCAAAAAAATTTGTTAGCAAGGGAGAACTAACGTCCCACAGTAGTATCCATATTGGGGAAAAGCCTCACAAATGTAAGCAGTGTAACACAGCATTCACCAAGAAGAGCTCGCTCATCAAGCACATGAAAAGACATCAAGGCATCAAGCCATACGAGTGTGATACATGTCATAAGAAGTTCACAACCAATTATTCTCTAAAAACCCACTACCGTATCCATACGGGGGAGAAGCCGTATGTATGTGAGATCTGTACTCAAGCGTTCACCCAAAGCAACGACTTAGTCAAACACCGCAGGAAACACCTGGGCGAGAAGTTGTTCAAATGTGATCATTGCACGGAGAGTTTCCGTCTCAAGACCGAGCTCAGACATCACGTCACTCAGCACTACGCCGCTAAACTACAACAAACTGACATGGCCGATCAACGAACAGATGAAATAGAAAGTAATGCCTTGAATGGTTGA
Protein Sequence: MDLLAAKDLPCLNDRCRTCMIRIFTGIPAVNIFERNIQNISIAEILHSFTALTFDANDQLPKVVCQLCYEKLNSFYQFVQYIENVDIKFKAELQGKDHLPSKNLIINNLNLEDVSVKDYLSQENEGDSIKKEFSEGYVALGAEDILVGLGHNTELNNPYAPKYEIVQEFVCKICYKYFSNKGNYQRHIKKHSDFTQNIEESMLTVPTSSVSNRTSHEEHSYEERSIVIEVMPPEDNINSDDEVADNDTKYNLKKEHTAGNEGTVCEICNAQFQNKYSRAAHMRKHVVKGRVLSCPTCGKVFRKVSHLKRHQLAGRKKKTKCHPMQKTTCGNVNNVTSIDIKGEFNCEICGQSFKTKVAKSMHMGTHVEKGTDLSQSTSSDIIKTEIEVERNYEMQDANDNLDGAEEGDIPCEICKKIFKCKFSLAAHLRKHTERKRMLSCSKCGKVFSKVSHVKRHELTHEEKTYKCSLCKKSFATRELFRQHLTQHNEAKECPICQKKFATKSTLSAHISQVHTHKNMYLCSYCGKKFDSTSNLNQHHLRHIGIKNWACSLCPKKFVSKGELTSHSSIHIGEKPHKCKQCNTAFTKKSSLIKHMKRHQGIKPYECDTCHKKFTTNYSLKTHYRIHTGEKPYVCEICTQAFTQSNDLVKHRRKHLGEKLFKCDHCTESFRLKTELRHHVTQHYAAKLQQTDMADQRTDEIESNALNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01248391;
90% Identity: iTF_00164570;
80% Identity: -