Piph016164.1
Basic Information
- Insect
- Polyommatus iphigenia
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963422495.1
- Location
- OY730183.1:12428051-12442035[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-70 4.1e-66 224.3 24.7 1 297 72 354 72 357 0.87 2 2 1 3.7e+04 -7.0 14.7 1 47 353 398 353 417 0.65
Sequence Information
- Coding Sequence
- ATGGCCTTGGTGCTGGAAGCGTCGTCACCGGAGCTCGTGCTGCGCGCCGCAGCGACGCTGTTGTTGCTCTACGAACACAAGGATATGTTCTTCCCTACGGAGCCTGATAGGCAGCCAACCAAGTTGCTGGCGGTACTCAGAGACATGATCAAACTTGCGCAGACCATATACGAACCTAATGCAGACGTTTTGCAACCTTTCAAGTTTATTAAGGCGGAACAGCGTCTGGCGGCGCGGCGCGCAGCGCGGGCGGAGGCGCGCGAGATCCGCATGCGGGAGCTGGAGCGACAGCAGCGCGAGCAGGAGGACCACGCCGACAAGGCCTATGATATGTACGCAGAGACAGTAGGCAGACGGGCGGGCGGGCGGCTCGCGGCGCTCAGCCCCGCCGCGCACTCCCCGCGCCGCGCCTCCGAGGACTCGGACGACGTGCTCGGCGTCAAGGACCTCCGGCACGAGCTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTCACCGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACAGACTCGAGCTGCTGGCCGACCGCCTGGAGGAGCTGCACGAGGAGCACGCGCAGCTGCAGCGCGAGCACCGCGACCGCTGCTCCGCGCACGAGCGCCTGCGCCGCGAGCACGAGGCGCTGGAGCGGGAGctggcgcgcgcgcgggacGCGGTGCGGGCGCGCGactccgccgccgccgccgccgggtTCGCCTTCGtcgacgccgccgccgcgcccgaCGCGCCCGCGTCCGGCGAGTCGCACGGCTCCGTGCCGCCGCTCGCGCTCGTCTCGCACGCCTCCGAGCGCCTGCTCGATGACGCCGGCGAGGGCACGCTAGATGTCCGATTACAAAACTTGGTAAGCTCGAAGCAGGCGCTGGAGAGCGAGGTGCGGAAGCTGAAGCTGCAGCTGAACGacgagcgcgcggcgcggcAGAACGGCGCCGCCTCACACCACGACCGCGAGCACGAGAGCGAGCTGGAGACACTCCGCAAGGCGGTATCTGAGGCGAAGGGTCGGGCGGCGCGCGCTGAGGCGGAGGCGGCGCTGCAGGCCGCGGCGGTGGCGCGGCTCGAGGCGCAGGTGGGCCGCCTGCGCGCGCAGCACGTGCAGCAGGACGAAAACGAGGAGCAACTCAAACAGGAGCGACGACGGCTGCAGAGAGAGGCTCGGGAAGCGCTGAACCGCGTTGAGGAACTGGAGACGGAGAACAAACACCTCACCAAGCGGCTCGACAAGCTCAAAAACGCCAAGTCCGCGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MALVLEASSPELVLRAAATLLLLYEHKDMFFPTEPDRQPTKLLAVLRDMIKLAQTIYEPNADVLQPFKFIKAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGGRLAALSPAAHSPRRASEDSDDVLGVKDLRHELKEVEEKFRKAMILTAQLDNDKAALGYRLELLADRLEELHEEHAQLQREHRDRCSAHERLRREHEALERELARARDAVRARDSAAAAAGFAFVDAAAAPDAPASGESHGSVPPLALVSHASERLLDDAGEGTLDVRLQNLVSSKQALESEVRKLKLQLNDERAARQNGAASHHDREHESELETLRKAVSEAKGRAARAEAEAALQAAAVARLEAQVGRLRAQHVQQDENEEQLKQERRRLQREAREALNRVEELETENKHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00290729; iTF_00787672;
- 90% Identity
- -
- 80% Identity
- -