Hfuc012952.1
Basic Information
- Insect
- Hemaris fuciformis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_907164795.1
- Location
- OU015436.1:16053444-16060046[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-79 3.7e-75 253.6 12.3 1 264 3 268 3 291 0.88 2 3 0.068 1.8e+03 -1.5 7.4 1 37 292 328 292 346 0.86 3 3 0.03 8.1e+02 -0.4 0.4 147 236 392 415 372 418 0.56
Sequence Information
- Coding Sequence
- ATGGAGGCGGAACAGCGATTGGCGGCGCGTCGAGCTGCGCGTGCGGAGGCTCGCGAGATACGCATGCGCGAGTTGGAACGGCAACAGCGGGAGCAAGAGGACCATGCTGACAAAGCCTACGACATGTATGCAGAGACGGTGGGGCGTCGCGCCGGCGGGCGGCTCGCGGCGCTCAGCCCCGGCGCCGTGCACTCGCCGCGACGCAGCTCCGAGGACTCCGTCGACGACAGCTTCAACGTCAAAGACCTCAGGCACGAGCTCAAAGAGGTGGAAGAGAAGTTCCGCAAAGCGATGATCCTCAACGCTCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTTGAGTTGCTCAAGGACAGGATAGAAGAGCTGCACGAGGAGTACGCGCAGCTGCAGCGCGAACACCGCGAGAAGTGTTCGTCGCACGAGCGGCTGAAGCGCTCGCACGCGTCGCTGGAGCGCGAGGTGGAGGCGGCTCGCGGGGCCGTGCGCGCCCGGGACGCGGCGGCGCACGCGGCCGGCTTCGCCTTCGTCGACGCCGCGCCCGCTGAACCTCCCGCAGACACTGCGCCAGACTCCCCCCCGCACCCGCCACACCCGCCACACCCACCCCTCGCGCTCGTCAGCCACGCCGCGCAGCAGCTGCTCGACGACGCTGGAGACGGCACGCTCGACGTGCGGTTGCAGAAGCTGGTGGGCTCGAAGCAGGCGCTGGAGTCGGAGGTGCGCAAGCTGAAGCTGCAGCTCAACGAGGAGCGCGCCGCCCGCCACAACGGCGTCGCCAACCACCACGACCTGCACTACGAGACCGAACTGGAGTCGCTGCGCAAGAGCGTGTCGGAGGCGAAGGGTCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCACCGCGCGACTCGAGGCGCAGCTGCAGCGCCTGCGCGCGCGCCAGGACCACCAGGACGAACACGAGGAACTGCTCAAGCAGGAGCGGCGCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTGACCAGAGACGAATTACCCTATTCAACACGGCAAGAGAAGCTCTAAACAGAGTGGAGGAGTTGGAGACAGAGAACAGTCACTTGACGAAACGGCTGGACAAGCTAAAGAACGCAAAGTCGGCGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MEAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGGRLAALSPGAVHSPRRSSEDSVDDSFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSHERLKRSHASLEREVEAARGAVRARDAAAHAAGFAFVDAAPAEPPADTAPDSPPHPPHPPHPPLALVSHAAQQLLDDAGDGTLDVRLQKLVGSKQALESEVRKLKLQLNEERAARHNGVANHHDLHYETELESLRKSVSEAKGRAARAEAEAALQAAATARLEAQLQRLRARQDHQDEHEELLKQERRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDQRRITLFNTAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01248146;
- 90% Identity
- -
- 80% Identity
- -