Basic Information

Insect: Pogonocherus hispidulus
Gene Symbol: lov
Assembly: GCA_963924545.1
Location: OZ004698.1:56162809-56171235[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.6e-17 7.9e-15 55.9 0.0 1 44 390 433 390 434 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.6e-17	7.9e-15	55.9	0.0	1	44	390	433	390	434	0.96

Sequence Information

Coding Sequence: ATGACGCAGTCGCACTACTCCCTACGATGGAACAACCATCAGACCCACATCCTCGCCGCGTTCGAAGCTCTTCTGCAAGCCGAAACCCTCGTAGACGTCACCCTGGTATGCGCGGAAACGTCCGTCAGGGCTCACAAGGTGGTCCTGAGCGCCTGCTCCCCGTTTTTCCAAAGGATATTCTCCGAGAACCCTTGCAAGCACCCAGTGATAGTCCTGAAGGACTTCAGTGGGTGGGAGGTGCAAGCAATCGTCGATTTTATGTACAAGGGAGAGATATCCGTCGTTCAAGAGCAGCTGCAGAGCCTTATAAAAGCTGCCGAGAGCCTGCAGGTCAGAGGATTGGCAAACCAGGATCCTTTCGGGGTTGATAAAGAGTCCACGTCCATTATAAATCAAACACCAACACCTTCGGCGTCGCCAAACGACTACGACAGGAACTACTTCAGCAGTGGAAGGTTTCCCACACCTGGAGTAACTGTAAGGACACCAGGGGAACGATCCTCACCTTTCTCACCAATTCCTGGGCAAAATAATTACGAAAATCCGGTTAAACTCCCCCACATGTCGCGGTTGTCTTTTCCAGAGACTCTGCTACCCAGACAAGAGTGCCAGTCGCCGATACCAAGAAGAAAACAGGCAAGACCTAGACGCAGATCTGGTGAGTTGTGCACCGCGCAAGACCTTTCAACTGGTTTGGTAAAACCGGGGTCTCCGAGCGAGGATATCGCGGAGAATCTCTGCATAAAGAAGCATCACAAAGAAGATAGGAAAGAAATAAAGGAAGAGGACAAGTGCAGGACACCTGAGCCCAGCTCCGGGAGTCCAGAGATGGACCTGAGTGTGCAGAGTGGTAAGGAGTTCAGGTCTTCGCCCGTGAGTGTCCATCCGGTGATGAATTTGAAGCAGGAGATTGAGAGCCACTCTCCTCTACCCTTTCCGCCTATGCCGTCGGTTTCCGCCCTGGCCATGACGCCCCCTCATAGTAAATtttttggacTCGATTCTCCCCTAGGACTTTTCCCGCCAGGACTGGATGGCTGTAGGAACCCTCTATTTGATATGCCTGACCCTAGAACTACACCGGATTCCCAAATTTTCGCAAAAAAGAAAATGGGACGACCAAAAGGCCAGCATTCCGCCCCGCGCGGCGGGCCTCCCCGTTCCTGGACCAACGCCGAACTCACCGAAGCCCTCCAACATGTCTGGAACAAAAAAATGACCACCAGCCAGGCGTCCCGAATCTTCGGCATCCCCTACAACTCCCTCCTCATGTATGTCCGCGGGAAATACGGCAAGAGCCTCAAACTCGAGCAACTCCGAAAGGACTGCATAGGGGGCCCCAATCCCTCCATGGACCTACTCTCAATGGGCGGGgggaacaacaacaacaactctTGCAAGAGCGAGAGAGAACCCGAGCAAATCCAGCCCAACACCAGGCCATCCAGCACGGAGGAGCAGCCGCCTCAACCGCCGGTTTTCAATCCCTTTGCGCACAGTTTCTACCCGGACTTCGGCACGGGGTTTCCTATACCAGTCAGCATGATCCATCTGTTGCCGCAGAGCGAGAAGAGTCGGGAGCACTACGCGCAGCAGCAGGCTCTAGAAGAGGACTGTAAAGAGCGGGTGAAGGAATTGGATGATGATCAAGACATGTTTCGGCCCCCAGCGCTCTCTGTCGAGGACCGACGGGAACTGGTGCAGCAGAACGGGCAGGATTAG
Protein Sequence: MTQSHYSLRWNNHQTHILAAFEALLQAETLVDVTLVCAETSVRAHKVVLSACSPFFQRIFSENPCKHPVIVLKDFSGWEVQAIVDFMYKGEISVVQEQLQSLIKAAESLQVRGLANQDPFGVDKESTSIINQTPTPSASPNDYDRNYFSSGRFPTPGVTVRTPGERSSPFSPIPGQNNYENPVKLPHMSRLSFPETLLPRQECQSPIPRRKQARPRRRSGELCTAQDLSTGLVKPGSPSEDIAENLCIKKHHKEDRKEIKEEDKCRTPEPSSGSPEMDLSVQSGKEFRSSPVSVHPVMNLKQEIESHSPLPFPPMPSVSALAMTPPHSKFFGLDSPLGLFPPGLDGCRNPLFDMPDPRTTPDSQIFAKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPNPSMDLLSMGGGNNNNNSCKSEREPEQIQPNTRPSSTEEQPPQPPVFNPFAHSFYPDFGTGFPIPVSMIHLLPQSEKSREHYAQQQALEEDCKERVKELDDDQDMFRPPALSVEDRRELVQQNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01014767; iTF_00110705; iTF_01014166; iTF_01227449; iTF_00110459; iTF_00792321; iTF_00387394; iTF_00387115; iTF_00792012; iTF_01480258; iTF_01480044; iTF_01481036; iTF_01480783; iTF_01409876; iTF_01410116; iTF_00639455; iTF_00639674; iTF_00415239; iTF_00414983; iTF_00327784; iTF_00328356; iTF_00165963; iTF_00166209; iTF_00395599; iTF_00395176; iTF_01310704; iTF_01310256; iTF_00056465; iTF_00056739; iTF_00870706; iTF_00870481; iTF_00755379; iTF_00755908; iTF_00753108; iTF_00752870; iTF_01296629; iTF_01295876; iTF_01278294; iTF_01277606; iTF_01311671; iTF_01311477; iTF_00886586; iTF_00885813; iTF_00167739; iTF_00167587; iTF_00388863; iTF_00387987; iTF_00647328; iTF_00646697;
90% Identity: iTF_00886586;
80% Identity: iTF_01227449;