Lqua057792.1
Basic Information
- Insect
- Leptura quadrifasciata
- Gene Symbol
- lov
- Assembly
- GCA_963675555.1
- Location
- OY776679.1:88084491-88102917[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-16 6.8e-14 53.4 0.0 1 44 389 432 389 433 0.96
Sequence Information
- Coding Sequence
- ATGACCCAATCACACTACTCTCTCCGATGGAACAACCATCAAACCCACATTTTGGCCGCCTTCGAAGCCCTTTTACAAGCCGAAACCCTCGTGGACGTGACGCTAGTATGTGCGGAGACATCAGTAAGAGCCCACAAAGTTGTTTTAAGTGCATGCTCGCCATTCTTCCAAAGAATATTTTCGGAAAACCCCTGCAAGCATCCGGTTATAGTACTAAAAGACTTCAACGGTTGGGAAGTGCAAGCTATTGTCGATTTTATGTACAAGGGAGAAATTTCAGTCGTTCAAGAACAATTACAAAGTCTCATCAAAGCTGCTGATAGCTTACAAGTGAGAGGACTGGCGAACCAAGACCCCTTTGGAGTGGATAAAGAATCTACTTCTATCGTAAATCAAACACCTACACCATCAGCGTCGCCAAACGATTATGATAGGAGCTATTTCAGCAGCGGGAGGTTTCCAACCCCCGGAGTTACGGTAAGAACACCAGGAGAACGGGAATCTTTTTCTCCAATCTCCGGTCAGGTTAATTACGAACCACCTGTGAAACTCCCGCACATGTCTGGGTTATCGTTTCCGGATTCTCTTCTACCCAGACAGGAGTGCCAGTCGCCAATACCGCGAAGAAAACAAGCGAGACCTAGACGTAGATCGGGGGAATTATGTGGCGCGCAGGATTTATCCACGGGATTAGTTAAGCCTGGTTCTCCCAGCGAAGAAACAGCAGAAAATCTGTGTATCAAGAAACACGCCAAGGAAGAAAAGAAGGAGATCAAAGAAGAAGACAAGTCTCGGACGCCCGATCCGAGTGCAGGCAGTCCCGAGATGGATTTGAGTATGTCATGTGGAAAAGAATTTAGATCCTCACCTGCTAGCGTTCATCCTGCAATGAATCTGAAACAAGAAATTGATAGTCATTCCCCATTGCCTTTTCCGCCTATGCCGTCGGTCTCCGCACTAGCGATGACGCCTCCTCATAGCAAATTTTTTGGACTGGATTCACCCCTGGGTCTCTTTCCTCCAGGATTAGATGGTTGTAGAAATCCTTTATTTGATATGCCTGACCCTAGGACAACGCCTGAATCTCAAATGTTCGTGAAAAAGAAGAtggGAAGACCGAAAGGTCAGCATTCCGCCCCGCGTGGAGGCCCTCCAAGGTCTTGGACAAACGCTGAATTGACTCAAGCCCTCCAACACGTATGGAACAAAAAAATGACCACCAGCCAAGCGTCCAGAATATTCGGTATACCTTACAACTCCCTCTTGATGTATGTCAGAGGAAAGTACGGCAAAAGCCTAAAGTTAGAACAACTCAGAAAAGACTGCATAGAAGGTCCCAACCCTTCCATGGATATCCTCAACATAGGCGGTgggaacaataataataactcatGTAAAACAGAAAGAGATTCCGAACAAATCCAGCCAAATACCAGGCCATCCAGTACGGAGGACCAACCGCCCCAACCGCCGGTATTCAACCCCTTCGCGCATAATTTTTACCCCGATTTCGGAACGGGGTTCCCTATACCGGTCAGCATGATCCATCTGTTGCCGCAAAGTGAAAAGAGCAGAGAGCATTACGGCCAACAGCAACCCATGGAAGAAGACTGTAAAGATAGGTCTAAAGAAATCGACGACGATCAGGATATGTTTCGACCTCCAGCGCTATCTGTGGAGGACAGGCGGGAATTAGTGCAACAAAATGGGCAGGATTAG
- Protein Sequence
- MTQSHYSLRWNNHQTHILAAFEALLQAETLVDVTLVCAETSVRAHKVVLSACSPFFQRIFSENPCKHPVIVLKDFNGWEVQAIVDFMYKGEISVVQEQLQSLIKAADSLQVRGLANQDPFGVDKESTSIVNQTPTPSASPNDYDRSYFSSGRFPTPGVTVRTPGERESFSPISGQVNYEPPVKLPHMSGLSFPDSLLPRQECQSPIPRRKQARPRRRSGELCGAQDLSTGLVKPGSPSEETAENLCIKKHAKEEKKEIKEEDKSRTPDPSAGSPEMDLSMSCGKEFRSSPASVHPAMNLKQEIDSHSPLPFPPMPSVSALAMTPPHSKFFGLDSPLGLFPPGLDGCRNPLFDMPDPRTTPESQMFVKKKMGRPKGQHSAPRGGPPRSWTNAELTQALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIEGPNPSMDILNIGGGNNNNNSCKTERDSEQIQPNTRPSSTEDQPPQPPVFNPFAHNFYPDFGTGFPIPVSMIHLLPQSEKSREHYGQQQPMEEDCKDRSKEIDDDQDMFRPPALSVEDRRELVQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01226540;
- 90% Identity
- iTF_00886586;
- 80% Identity
- iTF_00886586;