Gqui014897.1
Basic Information
- Insect
- Gonioctena quinquepunctata
- Gene Symbol
- lov
- Assembly
- GCA_018342105.1
- Location
- JAFIRS010002219.1:151934-158268[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-17 4.5e-15 56.1 0.0 1 44 368 411 368 412 0.96
Sequence Information
- Coding Sequence
- ATGACACAGTCGCATTACTCTCTACGATGGAATAACCATCAAACACACATTTTAGCAGCATTCGAGGCCCTGTTACAAGCTGAAACACTAGTGGATGTTACTTTAGTATGTGCCGAGACGTCCGTGAGGGCCCACAAAGTTGTATTGAGTGCATGCTCGCCATTTTTCCAGAGGATATTTTCCGAAAATCCATGTAAACATCCGGTTATTGTACTGAAGGATTTCAGCGGGTGGGAAGTCCAAGCTATTGTTGATTTCATGTACAAAGGGGAGATTTCCGTTATTCAGGAACAACTACAGAGTCTGATAAAGGCCGCCGAGAGTCTGCAAGTCAGAGGACTAGCTAATCAAGATCCATTTGGCGTGGATAAAGAATCTACCTCTATCATCAATCAGACACCCACACCATCCACATCTCCCAATGAATATGACAGGAATTATTTAATTCTGGTAGATATCCCAGTTCTGCTGCAAGAACTCCCGGAGAACGAAGTTCGCCTTTTTCTCCTATCTCGATCCAAAATAGCTTTGATTCACCAATCAGAATGTCAATCCCCTATACCTAGGAGAAAACAAGCGAGGCCTAGACGCAGATCTGGAGAGTTATGTGGCGCTCAAGATCTCAGTACAGGTGTCATGAAACCGGGTTCTCCCGACGAGGAAGCGGCGGAGAATCTgtgtattaaaaaattcaaagaggATAAAAAGGAAATCAAAGTGGAAAAGTCGAGAACACCTGAACCCGGCGTGGAAAGTCTAGAAATGGATTTGAGCTTGCAAAGTGGAAAAGAATTCGGATCATCGCCCATTAATCTCCATTCTTCGATGAATATGAAACAAGAAATTGACAACCACTCACCCTTACCTTTTCCACCCATGCCGTCGGTATCAGCGCTGAGCATGACGCCCCCTCATAGCAAATtttttggatTGGACTCGCCACTTGGGCTCTTTCCGCCGGGACTGGATGGCTGCAGAAACCCTCTCTTCGACATGCCAGACCCCAGGACAACACCCGACTCCCAAATGTTCGTTAAAAAGAAAATGGGAAGGCCAAAGGGCCAACATTCCGCCCCCAGAGGAGGTCCCCCTCGTTCCTGGACGAACGCTGAACTCACAGAAGCTCTCCAGCATGTTTGGAACAAAAAAATGACCACCAGCCAAGCATCCAGGATATTTGGAATTCCTTACAACTCTCTCCTCATGTACGTCCGAGGCAAATACGGCAAAAGCCTCAAACTAGAACAGCTGCGAAAAGACTGTATAGGGGGGCCAAACCCTTCAATGGATATTATCAACATGACGAGTGGAAACAATAATAACAACAGCTGTAAAACAGAAAGGGAAGTTGAACAAATCCAGCCGAATTCGAGGCCGCCTAGCACCGAAGAACAACCTCATCCCCAACCTCCCCTCTTTAATCCGTTCGCACACAATTTTTATCCAGATTTTGGTACGGGGTTTCCCATACCGGTGAGTATGATACATCCTATTGCCACAAAGCGAAAAGAGTAG
- Protein Sequence
- MTQSHYSLRWNNHQTHILAAFEALLQAETLVDVTLVCAETSVRAHKVVLSACSPFFQRIFSENPCKHPVIVLKDFSGWEVQAIVDFMYKGEISVIQEQLQSLIKAAESLQVRGLANQDPFGVDKESTSIINQTPTPSTSPNEYDRNYLILVDIPVLLQELPENEVRLFLLSRSKIALIHQSECQSPIPRRKQARPRRRSGELCGAQDLSTGVMKPGSPDEEAAENLCIKKFKEDKKEIKVEKSRTPEPGVESLEMDLSLQSGKEFGSSPINLHSSMNMKQEIDNHSPLPFPPMPSVSALSMTPPHSKFFGLDSPLGLFPPGLDGCRNPLFDMPDPRTTPDSQMFVKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPNPSMDIINMTSGNNNNNSCKTEREVEQIQPNSRPPSTEEQPHPQPPLFNPFAHNFYPDFGTGFPIPVSMIHPIATKRKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01226540;
- 90% Identity
- iTF_00755908;
- 80% Identity
- iTF_00755908;