Aver013589.1
Basic Information
- Insect
- Asbolus verrucosus
- Gene Symbol
- lov
- Assembly
- GCA_004193795.1
- Location
- QDEB01124832.1:4508-8968[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-19 2e-15 55.9 0.0 1 44 388 431 388 432 0.96
Sequence Information
- Coding Sequence
- atgactcaATCGCACTACTCTCTGAGATGGAACAACCATCAAACCCACATCCTGGCGGCGTTCGATGCTCTCCTGCAGGCGGAGACCCTCGTGGACGTGACTTTGGTATGCGCGGAGACGTCAGTGCGGGCCCATAAAGTCGTGTTAAGTGCTTGTTCGCCCTTCTTCCAACGAATATTCTCCGAAAACCCCTGCAAGCATCCGGTAATTGTCCTGAAGGACTTCAGCGGCTGGGAGGTGCAGGCCATCGTCGACTTCATGTACAAAGGCGAGATTAGCGTGGTCCAGGAGCAGCTGCAGAGCCTGATAAAGGCGGCGGAGAGCCTGCAGGTGCGCGGCTTGGCCAACCAAGACCCCTTCGGCGTCGACAAAGAGTCCACCTCGATCATCAACCAGACGCCCACGCCTTCGACGTCGCCCAACGATTTCGACAGAAGCTACTTCGGTCGCTTTCCCACGCCGGGCATCACCGTGCGTACCCCCGGAGAGCGCTCCTCGCCCTTCTCACCCCTGTCGTGTCCGTCGAGCTACGAGCCCTCGGTGAAGCTGCCGCACATGTCCAGGCTATCTTTTCCCGAGTCGCTCTTGCCCAGGTCCGAGTGCCAATCGCCCATTCCCAGGAGAAAGCAGGCCAGGCCCAGGAGGAGGTCGGGTGAGCTGTGCGGAGCCCAAGACTTGACGAAGCCGTCCCCGCCGCCCGAGGAAGCCGCGCCCGAGAACCTTTGCATGAAGAAGCCGACCAACAAAGACGAAAAAAGCATCAAAGACGAAGAAGTCAAAATACGCATCCCGGACCTGTCGGCCAGTCCGGAGATCGATCTAAGCATGCAGGGTGGTAACAATAAAGAGTTTAGATCTTCGCCACCTGTTAGTCTGCCGCCCACACTTAATATGAAACAAGAAATTGATAGCCACTCGCCTCTACCTTTCCCACCCATGCCGTCTGTTTCTGCACTTGCGATGACTCCTCCGCACAGTAAATTTTTCGGCCTGGACTCGCCTTTGGGACTATTTCCGCCCGGACTCGACGGATGCAGGAATCCCCTGTTCGACATGACCGACCCCAGAACGACGCCCGACTCGCAGCttttcgtcaaaaaaaaaaTGGGTCGACCGAAGGGCCAGCACTCGGCCCCGCGCGGGGGGCCGCCCCGCTCCTGGACGAACGCAGAACTGACCGAAGCCCTCCAGCACGTGTGGAACAAGAAGATGACGACGAGTCAGGCGTCACGCATCTTCGGCATTCCGTACAACTCCCTGTTGATGTATGTCCGCGGCAAATACGGCAAGAGCCTGAAACTGGAGCAGCTGCGAAAAGACTGCATCGGGGGCCCGACGCCCCCGATGGACCTCCTCAACATGggcaacaataacaacaacgCGTGTAAGAACGAAAGGGACAACGAATCGATCCAGCCTAACACCAGGCCATCCAGCACGGAAGAGCAGCATCCGCAGCCGCCTGTTTTCAATCCGTTCGCGCACAACTTCTACCCCGACTTCGGCACGGGGTTCCCCATCCCGGTCAGCATGATCCATCTGTTGCCGCAAAGCGAAAAGAGCAGAGATCACTACGGCGCACAACCACAGAGCGAGGACGACTGCAAGAATGAGAGGGTGAAGAAGGAGCTCGACGAGGACGACTTGTTCAGACCGCCGGCGCTATCTGTCGACGATAGAAGGGAGCTGGTCCAGCAGAACGGGCAGGATTAA
- Protein Sequence
- MTQSHYSLRWNNHQTHILAAFDALLQAETLVDVTLVCAETSVRAHKVVLSACSPFFQRIFSENPCKHPVIVLKDFSGWEVQAIVDFMYKGEISVVQEQLQSLIKAAESLQVRGLANQDPFGVDKESTSIINQTPTPSTSPNDFDRSYFGRFPTPGITVRTPGERSSPFSPLSCPSSYEPSVKLPHMSRLSFPESLLPRSECQSPIPRRKQARPRRRSGELCGAQDLTKPSPPPEEAAPENLCMKKPTNKDEKSIKDEEVKIRIPDLSASPEIDLSMQGGNNKEFRSSPPVSLPPTLNMKQEIDSHSPLPFPPMPSVSALAMTPPHSKFFGLDSPLGLFPPGLDGCRNPLFDMTDPRTTPDSQLFVKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPTPPMDLLNMGNNNNNACKNERDNESIQPNTRPSSTEEQHPQPPVFNPFAHNFYPDFGTGFPIPVSMIHLLPQSEKSRDHYGAQPQSEDDCKNERVKKELDEDDLFRPPALSVDDRRELVQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01226540;
- 90% Identity
- iTF_01480258;
- 80% Identity
- iTF_00167739;