Epin021716.1
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- sip1
- Assembly
- GCA_947363495.1
- Location
- OX376174.1:4245914-4255790[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-61 1.1e-56 193.1 3.8 4 275 370 623 367 623 0.96 2 2 0.39 5.4e+03 -2.7 0.0 73 104 635 668 627 679 0.48
Sequence Information
- Coding Sequence
- ATGTCTGATGACGAAGTAATACGATTTGAAATAACTGACTATGATTTAGACAATGAATTCAACCCGAACAGAAGCAGGAGGGCAAAGAAGGAACAGCAAATTTATGGTGTCTGGGCGAAGGACAGTGATGAAGATGATAATGAAGACAACATTAGACAGAGGACTCGGAAACCTAAGGATTTCTCAGCGCCCATCGGGTTTGTGGCCGGCGGTGTACAGCAGGCTGGCAAGAAGAAAGAGGAGAAAAAAGAATTACAATCATCAGAAGCTTCCACTTCTCGTCCAAAATTTGCGGCAGACAGTTCAGACGAGGATGAGAAACCCACCAACCCTGCCGAGAGCGAGACAGCAGGCATCCGGAGAGCGGGACAGGGCATGCGGACGCAGAACTTTGGAGGAAACATGGGCACTTGGGAGAAACACACTAAGGGCATTGGTGCCAAGCTGTTGTTGCAGATGGGCTACCAACCAGGCAAAGGTCTTGGCAAAGACCTACAAGGTATATCGGCCCCAGTGGAAGCCACTCTCAGGAAAGGTAGGGGTGCTATTGGAGCGTATGGTCCGGAAAAAGCTGCTCTAAAGGCAAAGAAAGAAGAAGAGAAGCGTCTGAAAGAGAAGGAAGAACAAGAGAAGGGAGTGGCAGAGAAGTCATACAACTGGAAGAAATCGCACAAAGGACGGTATTTCTATAGAGATGCCGCCGACGTCATACAGGAGGGGAAACCTTCCATGCATACTGTTTCTACCAACGAGTTATCTCGCGTACCAGTGATAGACATGACTGGCAAACAGAAGCGCGTGTTAAGCGGTTACCATGCCCTGCGAGCGGCGGCGCCTCGTTTCGAACACGAGCCTCGGAGGCAGTGCCGACATTTTGCTGCTCCGGCTCTTGTACATAACTTAGAACTTATGGTGGAATGCTGTGAACAGGACATAATCCAAAACGCCCGCGAACTCCAAACGGCAGAAGACGAGATCGTAGTATTGGAACGGGATTTGGAGGAATGCAACGTCAAACTGAAGGAACACGATGACGTCATTGAGAAGATGCAGGCCATACTGCAACGTGTTGAGGCCCTGGACAGGCCTGACGTGTCTTTGGAAGATGCTTATGAGGTTTTGGCTGATTTGAAGGAAGCGTATCCCCTAGAATACGAGACCTTCGGTCTGGGAACCATCGCGGGTACAATAGTGAGTCCCTTACTGAGCGCGTTACTGGCGACGTGGGACCCGCTGTGTTCGCCTGACGAACCGGTGCCCGTGTTCACTAAATGGAGGACATTGTTGACTGACGAAGCGTATAACAGTTTGCTGTGGCAACATTATGTGCCTCATCTCAATACCGCTGCTGAATCATGGAACCCCCGAGATCCAAATCCGATGTTGCGCGCGCTAACCAGCTGGTCGGACGTATGTCCCGCTTGGATCGTGACCAGTTGGTGTGCTCGGTGTGTGACTCCAAGATTGCTAGCGGGTGTACGCGCCTGGGATCCTACTGGAGACACGTTGCCCCTGCACACCTGGGTGTTGCCATGGCATCCACATAATGGTGAATCTCTCGCGAGATCGGTATACCCCGCGATTCGCAGTCGCCTCGCCACAGCTTTAGCAGCTTGGCATCCCGCAGACGGCTCGGCCAGGCCTCTACTGGCAGCTTGGAAAGAAGCCTGGGGGTCTTCATTAACGGCCTTATTGCACCAGCATATAGTGCCCAAGCTGGAGCACTGTCTGCAAATGGCGCCTTTGGAGCTGGTCGGCAGAGAAAATGCGGCGTGGCTATGGTGCGTGGACTGGCTAGAGCTGCTCGGCGCTCCCACGGTTGCCGCGCTAGCCTCGCGCGCGTTGTTGCCGAGATGGCTGGCCGCGCTAGCCGCCTGGCTCAACACCAACCCCACGCACGCTACTGTGCTCAACTCTTACACTGACTTCAAGAAAATGTTCCCGGAAGAAGTCCTAAAAGAGCCAGCAGTCCGAGATGCCTTTAGGAAAGCATTGGACATGATGAACCGAAGCACCGACATCGAAACCGTCGAACCGCCCCCACCACCGCGATTCACCGTCACAGAAACAAAGGAAACTTCCAGAATCGCCGACGTACTAGCTTCGACTACCCAACAGAAGAGCTTCTCAGAATTATTAGAATCTAGATGTATAGAAAAAGGGATAACGTTTGTGCCAATAGCAGGGAAGACTCGGGAAGGCAGACCGTTGTATAAGATTGGCGAATTACAGTGTTATGTTATTAGAAATGTTGTTATGTATTCTAATGATGGTGGGCGGACTTTTGGCCCTGTTAGTATGGAGCGATTGCTCAATTTGGTTGATGATTGA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRSRRAKKEQQIYGVWAKDSDEDDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKEEKKELQSSEASTSRPKFAADSSDEDEKPTNPAESETAGIRRAGQGMRTQNFGGNMGTWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATLRKGRGAIGAYGPEKAALKAKKEEEKRLKEKEEQEKGVAEKSYNWKKSHKGRYFYRDAADVIQEGKPSMHTVSTNELSRVPVIDMTGKQKRVLSGYHALRAAAPRFEHEPRRQCRHFAAPALVHNLELMVECCEQDIIQNARELQTAEDEIVVLERDLEECNVKLKEHDDVIEKMQAILQRVEALDRPDVSLEDAYEVLADLKEAYPLEYETFGLGTIAGTIVSPLLSALLATWDPLCSPDEPVPVFTKWRTLLTDEAYNSLLWQHYVPHLNTAAESWNPRDPNPMLRALTSWSDVCPAWIVTSWCARCVTPRLLAGVRAWDPTGDTLPLHTWVLPWHPHNGESLARSVYPAIRSRLATALAAWHPADGSARPLLAAWKEAWGSSLTALLHQHIVPKLEHCLQMAPLELVGRENAAWLWCVDWLELLGAPTVAALASRALLPRWLAALAAWLNTNPTHATVLNSYTDFKKMFPEEVLKEPAVRDAFRKALDMMNRSTDIETVEPPPPPRFTVTETKETSRIADVLASTTQQKSFSELLESRCIEKGITFVPIAGKTREGRPLYKIGELQCYVIRNVVMYSNDGGRTFGPVSMERLLNLVDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00146435;
- 90% Identity
- iTF_01220669;
- 80% Identity
- -