Parg017586.1
Basic Information
- Insect
- Plebejus argus
- Gene Symbol
- -
- Assembly
- GCA_905404155.1
- Location
- FR989934.1:2598123-2608100[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 2.5e-07 1.9e-05 25.3 2.1 1 23 193 215 193 215 0.99 2 32 0.002 0.15 13.0 1.9 2 21 268 287 267 288 0.92 3 32 0.0014 0.11 13.4 0.4 2 23 314 336 313 336 0.96 4 32 2.1 1.6e+02 3.5 0.1 2 20 357 375 356 377 0.92 5 32 0.0012 0.091 13.7 0.5 1 23 387 409 387 409 0.97 6 32 0.032 2.4 9.2 0.4 1 23 430 452 430 452 0.98 7 32 0.0023 0.17 12.8 0.9 1 23 491 514 491 514 0.94 8 32 0.0017 0.13 13.2 4.1 2 23 571 593 571 593 0.97 9 32 0.00023 0.017 15.9 1.8 1 23 643 666 643 666 0.97 10 32 0.00068 0.052 14.4 0.5 2 23 723 744 722 744 0.96 11 32 0.0017 0.13 13.2 4.9 2 23 756 777 755 777 0.97 12 32 0.034 2.6 9.1 1.5 2 23 789 810 788 810 0.96 13 32 0.014 1 10.4 0.7 1 23 820 842 820 842 0.98 14 32 0.021 1.6 9.8 4.7 2 23 872 893 872 893 0.96 15 32 0.00022 0.016 16.0 2.4 1 23 904 926 904 926 0.98 16 32 0.014 1.1 10.3 3.1 1 23 934 956 934 956 0.97 17 32 0.00067 0.051 14.5 0.2 2 23 976 998 975 998 0.97 18 32 3 2.3e+02 3.0 0.7 1 23 1016 1038 1016 1038 0.88 19 32 0.12 9 7.4 3.7 1 23 1045 1067 1045 1067 0.97 20 32 0.00061 0.046 14.6 2.7 2 23 1078 1100 1077 1100 0.95 21 32 0.065 4.9 8.2 0.1 2 23 1123 1144 1122 1144 0.94 22 32 0.29 21 6.2 0.4 2 20 1148 1166 1147 1167 0.93 23 32 6.3 4.7e+02 2.0 3.2 2 23 1187 1209 1186 1209 0.90 24 32 0.0015 0.12 13.3 0.3 2 23 1225 1246 1224 1246 0.95 25 32 7.7 5.8e+02 1.7 2.9 5 23 1256 1274 1253 1274 0.93 26 32 0.012 0.9 10.5 0.5 2 23 1285 1307 1284 1307 0.95 27 32 0.046 3.5 8.7 2.0 2 23 1324 1342 1324 1342 0.92 28 32 0.75 56 4.9 1.8 2 20 1346 1364 1346 1365 0.93 29 32 0.26 19 6.3 1.1 2 23 1416 1437 1415 1437 0.93 30 32 0.0036 0.27 12.2 0.1 2 23 1448 1470 1447 1470 0.95 31 32 0.98 74 4.5 0.5 3 23 1487 1504 1486 1504 0.78 32 32 0.11 7.9 7.6 3.0 1 21 1507 1527 1507 1528 0.95
Sequence Information
- Coding Sequence
- ATGGCTCTCAAGCTCGGAAAATGTAGACTTTGTCTCAAACTTGGAGATTTTTGCTCCATCTTCACCGCGGATAACAATGTTCAACTCGCTGAAATGGTTATGGAATGTGCCCGAGTAAAAATATATGAAGGAGATGGACTACCGGATAAAATATGCAATGAGTGCATACAGAAACTCAGCGGTGCTCATATATTTAAACAGCAATGTGAACGCTCGGACCAGGAACTGCGACGAAACTATGTGCCACCACCAGGATTTAGTATATCACCCCCTCCGCCGACTCCGACGAACAGACAGAGCAGCGATTCCGCGTTTTCTTCTCTCGCTACCGAAGTATCGAAACCCTCGTCTTCCGTCGTGAGCCAAGTGAAAGCGGCTCCCAGAGCTCGCAAACGAAGCGGCGACAGCATCGACGACGCGTCCGTCAGCAGTCGCTCCCACGACTACCGCGGGGTCACCAAACGCGTCGACGAGCTCCGGACGACCCACAAGAGGGGAAGATACACGTCCGACTCCGATTACGAGGACAACAGCGCGTTCTACTCGGCCGAAACCGACTCCGACGACGTGTGCGATTACAAATGCAAGGAATGTCCGAAATCTTTTAAGACTCAAAAGAGTTTGACGGCCCACACCAAGGTGCACAGACGCAAAATCTACAATCAAGCGAACGCTTCCCGGGAAAATGACGACTTGGACACGACGTACAATAGCGCCGCCGATGCGAGTGTTAACGAACCGAATTCGACCTTCGAGACCTCCAAAACCTTCGACGACGCCATGGACGTGGAGGACAAGCTCTCGTGCGACAAATGCAACAAAACATTCAAGTTGAAGATCATGCTGAAACGACACCACGAGACGTGCGGCAAAACTCCCACGAAGACGCTCCAAGTCGCCCTGGAGCCGCTGGATCTGCCGGCGCCCAGCTTCACGATCACCTGCAAGATGTGCAGCAGCCTGTTCAAGACCGTCGAAAATCTCGCGAAGCACATGAGAGTCGTCCACGCGGCGGCGCTGCCTGAGGAGCTACAGAAGGAGAAAATTGTTGAAGCCGCCGTCTCTGTCCCGTGTGTTTTTTGTCAGCAGTCGTTCGACGAATTCCAAGCCTACAAGAAGCATATAGACGAATGCTCCGAGAAACGAACTTTGCCGAGTTTCGACTGCCCGCTCTGCCAGCGACCGCTGTCGAGGAGACACGCCTACATCGCCCATATCAAGTCACACTTTTTCCCGACGACGAACACGAGATTCCCCAACACGCCGCTAAAGCCAGAAACGCCCATCTTCAAATGTCGTTTCTGCAGCCTCACGCTGCCCAGCCAGGAGCTCCTGATAATTCATTTGTCCAAGCATATGTCGAATATGGACGATCCTAACGAAGCCGGCGACGAGGAGTCGAGAGCGAGTACTGTCGAAGATTCAGCGTCCGTTCATTCCGAATACAGCGGAAGTGCGCCACCTCGAAAGTTCAACTGTCGCTACTGTGGCAAACAATTCACATACGAAAAAGCTATGGCCACTCATATAGTTAAAAATCACCCGCCGGGCTCGGAGGTCAAAGGCGAGCCGCCGGATAAAAACACCTCCTCGGACCTGCTCGACGAGGCGAACCAGAGCTTGGACAACACGGGAATGACCGAGGGCATGAACGACACGGGGATGACGGAGTCCGAGTCGAGCCACGACGAGGAGGGCGAGGACGACAACACGTGCGACATCTGCGAGAAGCAGTTCTCGTACCGTCGTCTGCTGCTGCACCACAAGCGCACCAAGCACAACATGTCCTCCGGCACCAAGCGCGCCAAGATCACGCTCAAGGACTGCACGGTGCGCTGCCTCATCTGCGACATCGAGATGAAAGTGAGCGACATCAACGAGCATAACCAGACGCACATATCCGTCAACATGAAGCCGAGGAACTTGTACACGTGCACCCTCTGCACCATGACGTTCAAGAGCTGCAGCGGCCTGGCGAACCACATCAAGCTAGTGCACAGACTGAAGCAGCAGGCGCCCAAATTAGATATGTCCGCCCCGAATCCGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAGCCCCTGGACAATGTTCAGGGTCACAACGGCTTTTCCGAGGCCGCCGCCACCGAACCGATACCTTTGGTGAACATGCAGGAGCTGACTTGCCACATCTGCGGCAAGCAGCTGCCGACGCTCATCTCGCTCAAGAGACACGTCAACTGGCACAAGAATGTCGGCAACAACATCGAGAAGCCGATGGAGTGCCTTATTTGCAAGGAGACGTTCAGATTCCAGTGTCACTACAAGATACACATGCGCGTCCACTACCACGACACCAACCTGGACCCGAAGCACCTCACCTGCCCCATCTGCAACCGCAAGAGCAAGCACCTGCGCGCCGCCCAGATGCACATGAACTACCACAAGCAGACCCGATTCAAGAATAAGGACTACGAGTGTTCCATTTGCAAACGAATCTTCCAATACCGCAAGGTCTACCTCTCACACATGGCCGTCCACTTCAAAAAGGGTGACAGTGCCGCCAATACGATCGTCGGCTCCGAGCTCCCCATGAACGCGGACAGATCCGCGTTCGACGGCACTAACACCTGCCACCTCTGCGGCAAGATCTGCGACTCGGAGACCTCGCTCAAGCACCATCTCATCTGGCACAAATCTAAAACCCTCTTGTTCGGCGCGAGGCACCAGTGCGATATTTGCAGCGTAGTTTTCACTAACAAGAGACGCCTAGAGCTCCACTACCGAACTCATTTCGAGGACGACAACGGGCCCTTCAAGTGCCACATTTGCGGGAAAGGCTACATAGTGGAGGACTACTGCAAGAAACACATCAAGGGACACAACTTCGATAATCAGTCGCACAAGAAACGAATCGAAAAGCTGCGAAAGGATAAAGTGAAGTGTCCAATTTGCTCACGGTACTATCCCGACCTGGTTAAGCTAATTCGACACCTGCGACGAACGCACCCCGAGAGCAAGATGATAAAAGAGGACCCGGACGCCCCCCCGCCCATGTACCACTCGTGCAAACTGTGCGCCAAAGTTTTCCTGGACGAGAGGAGACTGCAATCTCACGAGGAAGCCCATCTTAGGAAACCAGAATTTTTCAAGTGTAAATTTTGCGGAAAGAAAACCATATCGCTGAAGAATCACAGGATTCACATAAAGGGTCATCTGACCCAAAAGTATATCGACGACCCGCTGAAGTGCCCCCACTGCGACGAGACGTTCAACAGGGGATACGACTTGCACTATCACCTTCGCGACTCCCACGACATCGTCGAGACTTGGATCGCCGAGCGCGGCACGCAGACCCTGGACGGTCCTCTCAAGGAACTGCAGTGCGGCGTCTGCTACAAAGTCCTGGCCAGCAAGGGCAACTACGACAGGCACGTCGACTACCACAACTCCCTGCGGTGCAACTACTGCTTCGAGTACTTCAACACCTCCCGATTTCTGGAGGGCCATCTCGCTTTCAGCTGTGAGAAGAAGAAACTCATAGGCGATACCGAGACTCATCCGAGAAAAATTAAGTGCGAGATTTGCTTCAAAGCTTTCCATCTGCAAGTCAAACTGGACTGTCATCTTCGGGTCAAACACGACATAAAGGTCTTCAGGGAGAAATCGGCTGGAAAAAGGGAGATCGTCTGCGACTACTGCTTCAAAGTTTTCGAAAACGAGTACGCGCTGAGCAACCACAAATTGTATCATCGCACGGTCGGCTACTACGGCTGCATATACTGCGCCAGGAAATTCAACACGATGACCGCGTACAGGAAACACAAAAATCATCACTTCGCCCAGCTGCACGTCGACGACCCCGTGAAGTGCGAGCACTGCGACGAGACGTTCGTCGCATTCCGGGAGATGATATACCACATGCGGGACGTGCATGACGACGACAAGGAGTGGATCATAGAGCCGAAGCAGTCCATCGAGGAGAAATGCCCCATCTGCGACAAGGTATTTTTCAATCTCCACCGCCACATCGACTACCACGAGGAGAACAGGTGCAAGAAGTGCGGCGAGTACTTCTACTCCACCGTCGACTTCGATAATCACCTGTGCCCGATCGACTCCGACGAGGAGGTCGACGAGAGCAGTGGCCTCACCGACCTGCGGCCCAAGTACGAGGAGTGCGACTTCTGCTTCAAGCCCACCACCAGGAAGAACTCCAAGAAGCTGCACGACAACATGCATCGCGGCTCCGGCGCCATATCCTGCCGGTTCTGCTCCCAGAAGTTCAAAACCATGGACGCGTTCAACATACACGCCTTCTCGCACCGGAGCAGGAAGTACAAGCTGAAGCCGATCAGGTGCAAGATGTGCCCCGAGGCGTTCGTCAAGTACGGGCCGTTCATGAAGCACATGCGGGACGTGCACAAGTCGCTTAAGAAGATGCACTACCGCGCGCGGGTGAAGGCCGAGCCGTGCGTCGTGTGCGGGCAGAGCTTCCCCAACCTGCACAACCACTACCGCGCGCACATGGACCACAAGTGCCCCGCCTGCCGCAAGTACTTCACCTCGAGCCGCGCCTTCGCCCAGCACCAGTGCGATCAGCCGGACGCCGACCCCACGAAGGTGTTCACGTGCGACGCCGACCTCAACCGCCTCATCGCCGAGTACGTGCCCAAGGACGAGCAGGACGACGAGAAGTACTACGGCTACGACGACGACGGTGCCGAGCCGCCGCTGGAGCCCGAGCCCGCGCGCCCGACGCACCCGCCGCGCCCGCGGGGCCGCCCCGTCAAGCCGCGCCCGCCGAAGCCGGTCGGTCCGGCGAGGCCGGTCGGCCGACCCCTGGGGCCCCGGACCTACAAGAACCCGAAGCTGGTGAAGCAAATCTGGCAGGGGCTCGGCAAGTCCGTCGCGGGCGCGCAGAGCTCGCAGGACGAGGACAGCCAGCCGTCCGTGGACCCCGACGAGGGCGAGCTGCACGAGATGGTACACGCCCCCATCATCTCCGACGTGCTGTCCCTCTACCAAAACAATGAGAAGAAAAAAGGTCGAAAGGACGACGACGAGGACAGCGACGTCGTGATGCTGTCCGACGACGAAGCCGGGCCCGAGCGGGTTATACCCATCGTCGTGGTGGACGACGACTGA
- Protein Sequence
- MALKLGKCRLCLKLGDFCSIFTADNNVQLAEMVMECARVKIYEGDGLPDKICNECIQKLSGAHIFKQQCERSDQELRRNYVPPPGFSISPPPPTPTNRQSSDSAFSSLATEVSKPSSSVVSQVKAAPRARKRSGDSIDDASVSSRSHDYRGVTKRVDELRTTHKRGRYTSDSDYEDNSAFYSAETDSDDVCDYKCKECPKSFKTQKSLTAHTKVHRRKIYNQANASRENDDLDTTYNSAADASVNEPNSTFETSKTFDDAMDVEDKLSCDKCNKTFKLKIMLKRHHETCGKTPTKTLQVALEPLDLPAPSFTITCKMCSSLFKTVENLAKHMRVVHAAALPEELQKEKIVEAAVSVPCVFCQQSFDEFQAYKKHIDECSEKRTLPSFDCPLCQRPLSRRHAYIAHIKSHFFPTTNTRFPNTPLKPETPIFKCRFCSLTLPSQELLIIHLSKHMSNMDDPNEAGDEESRASTVEDSASVHSEYSGSAPPRKFNCRYCGKQFTYEKAMATHIVKNHPPGSEVKGEPPDKNTSSDLLDEANQSLDNTGMTEGMNDTGMTESESSHDEEGEDDNTCDICEKQFSYRRLLLHHKRTKHNMSSGTKRAKITLKDCTVRCLICDIEMKVSDINEHNQTHISVNMKPRNLYTCTLCTMTFKSCSGLANHIKLVHRLKQQAPKLDMSAPNPADFCEVVVTKAEPLDNVQGHNGFSEAAATEPIPLVNMQELTCHICGKQLPTLISLKRHVNWHKNVGNNIEKPMECLICKETFRFQCHYKIHMRVHYHDTNLDPKHLTCPICNRKSKHLRAAQMHMNYHKQTRFKNKDYECSICKRIFQYRKVYLSHMAVHFKKGDSAANTIVGSELPMNADRSAFDGTNTCHLCGKICDSETSLKHHLIWHKSKTLLFGARHQCDICSVVFTNKRRLELHYRTHFEDDNGPFKCHICGKGYIVEDYCKKHIKGHNFDNQSHKKRIEKLRKDKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPMYHSCKLCAKVFLDERRLQSHEEAHLRKPEFFKCKFCGKKTISLKNHRIHIKGHLTQKYIDDPLKCPHCDETFNRGYDLHYHLRDSHDIVETWIAERGTQTLDGPLKELQCGVCYKVLASKGNYDRHVDYHNSLRCNYCFEYFNTSRFLEGHLAFSCEKKKLIGDTETHPRKIKCEICFKAFHLQVKLDCHLRVKHDIKVFREKSAGKREIVCDYCFKVFENEYALSNHKLYHRTVGYYGCIYCARKFNTMTAYRKHKNHHFAQLHVDDPVKCEHCDETFVAFREMIYHMRDVHDDDKEWIIEPKQSIEEKCPICDKVFFNLHRHIDYHEENRCKKCGEYFYSTVDFDNHLCPIDSDEEVDESSGLTDLRPKYEECDFCFKPTTRKNSKKLHDNMHRGSGAISCRFCSQKFKTMDAFNIHAFSHRSRKYKLKPIRCKMCPEAFVKYGPFMKHMRDVHKSLKKMHYRARVKAEPCVVCGQSFPNLHNHYRAHMDHKCPACRKYFTSSRAFAQHQCDQPDADPTKVFTCDADLNRLIAEYVPKDEQDDEKYYGYDDDGAEPPLEPEPARPTHPPRPRGRPVKPRPPKPVGPARPVGRPLGPRTYKNPKLVKQIWQGLGKSVAGAQSSQDEDSQPSVDPDEGELHEMVHAPIISDVLSLYQNNEKKKGRKDDDEDSDVVMLSDDEAGPERVIPIVVVDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00744973;
- 90% Identity
- iTF_00934053; iTF_00935018; iTF_00404033; iTF_00406086; iTF_00164584; iTF_01248401;
- 80% Identity
- -