Aage004607.1
Basic Information
- Insect
- Aricia agestis
- Gene Symbol
- -
- Assembly
- GCA_905147365.1
- Location
- LR990264.1:4924184-4932112[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 2.7e-07 1.9e-05 25.3 2.1 1 23 193 215 193 215 0.99 2 31 0.0021 0.15 13.0 1.9 2 21 268 287 267 288 0.92 3 31 0.00098 0.069 14.1 0.4 2 23 314 336 313 336 0.96 4 31 0.0013 0.091 13.7 0.5 1 23 388 410 388 410 0.97 5 31 0.034 2.4 9.2 0.4 1 23 431 453 431 453 0.98 6 31 0.00035 0.025 15.5 0.9 1 23 492 515 492 515 0.95 7 31 0.0018 0.13 13.2 4.1 2 23 572 594 572 594 0.97 8 31 0.00025 0.018 15.9 1.8 1 23 644 667 644 667 0.97 9 31 0.00074 0.052 14.4 0.5 2 23 724 745 723 745 0.96 10 31 0.0039 0.28 12.2 5.5 2 23 757 778 756 778 0.97 11 31 0.037 2.6 9.1 1.5 2 23 790 811 789 811 0.96 12 31 0.012 0.85 10.6 1.7 1 23 821 843 821 843 0.98 13 31 0.009 0.63 11.0 4.6 2 23 873 894 873 894 0.96 14 31 0.00023 0.016 16.0 2.4 1 23 905 927 905 927 0.98 15 31 0.015 1.1 10.3 3.1 1 23 935 957 935 957 0.97 16 31 0.00073 0.051 14.5 0.2 2 23 977 999 976 999 0.97 17 31 3.3 2.3e+02 3.0 0.7 1 23 1017 1039 1017 1039 0.88 18 31 0.36 25 6.0 3.6 1 23 1046 1068 1046 1068 0.96 19 31 0.00071 0.05 14.5 2.8 2 23 1079 1101 1078 1101 0.95 20 31 0.07 4.9 8.2 0.1 2 23 1124 1145 1123 1145 0.94 21 31 0.31 22 6.2 0.4 2 20 1149 1167 1148 1168 0.93 22 31 6.8 4.8e+02 2.0 3.2 2 23 1188 1210 1187 1210 0.90 23 31 0.0016 0.12 13.3 0.3 2 23 1226 1247 1225 1247 0.95 24 31 8.3 5.9e+02 1.7 2.9 5 23 1257 1275 1254 1275 0.93 25 31 0.012 0.88 10.6 0.4 2 23 1286 1308 1285 1308 0.95 26 31 0.05 3.5 8.7 2.0 2 23 1325 1343 1325 1343 0.92 27 31 0.8 57 4.9 1.8 2 20 1347 1365 1347 1366 0.93 28 31 0.28 20 6.3 1.1 2 23 1417 1438 1416 1438 0.93 29 31 0.0039 0.28 12.2 0.1 2 23 1449 1471 1448 1471 0.95 30 31 1.1 75 4.5 0.5 3 23 1488 1505 1487 1505 0.78 31 31 0.15 11 7.2 4.7 1 21 1508 1528 1508 1529 0.95
Sequence Information
- Coding Sequence
- ATGGCTCTCAAGCTCGGAAAATGTAGACTTTGTCTCAAACTTGGAGATTTTTGCTCCATCTTCACCGCGGATAACAATGTTCAACTCGCTGAAATGGTTATGGAATGTGCCCGAGTAAAAATATATGAAGGAGATGGACTACCGGATAAAATATGCAACGAGTGCATACAGAAACTCAGTGGTGCTCATATATTTAAACAGCAATGTGAACGCTCGGACCAGGAACTACGACGAAACTATGTGCCACCACCAGGATTTAGTATATCGCCCCCTCCGCCGACTCCGACGAATAGACAGAGCAGCGATTCCGCGTTTTCTTCTCTCGCTACCGAAGTATCGAAACCCTCGTCTTCCGTCGAGAGCAAAGTGAAAGCGGCTCCCAGAGGTCGCAAACGAAGCGGTGACAGCATCGACGACGCGTCCGTGAGCAGTCGCTCCCACGACTACCGCGGGGTCACGAAACGCGTCGACGAGCTGCGGACGACCCACAAAAGGGGAAGATACACCTCCGATTCCGATTACGAGGACAACAGCGCGTTCTACTCGGCTGAAACCGACTCCGACGACGTGTGCGATTACAAATGCAAGGAATGCCCGAAATCTTTTAAGACTCAGAAGAGTTTGACGGCCCATACCAAGGTGCACAGACGCAAAATCAACAATCAAGCGAACGTTTCCCGGGAAAATGACGACTTGGACACGACGTACAATAGCGCCGCTGATGCGAGTGTTAACGAACCGAATTCGACCTTCGAGACCTCCAAAACATTCGACGACGCCATGGACGTGGAGGACAAGCTCTCGTGCGACAAATGCAACAAAACATTCAAATTGAAGATTATGCTGAAACGCCACCACGAGACGTGCGGCAAAACTCCCACGAAGACGCTCCAAGTCGCCCTGCAGCCGCTCGAGCTGCCGACGTCCAGCGGCGCGATCACCTGCAAGATGTGCAGCAGCCTGTTCAAGACCGTCGATAATCTCGCCAAGCACATGAGAGTCGTCCACGCGGCCGCGCTACCACCTGAGGAGTTACAAAAGGAGAAAAATGTCGAAGCCGCCATCTCTGTCCCGTGTATTTTTTGTCAGCAGTCATTCGAAGAATTCCTAGCCTACAAGACGCACATAGACGAATGCTCCGAGAAGCGAACCTTGCAGAGTTTCGACTGCCCGCTCTGTCAGCGACCGCTATCGCGGAGACACGCCTACATCGCCCATATCAAGTCCCACTTTTTCCCTACGACGAACACGAGGTTCCCGAACACGCCGCTAAAACCTGAGACGCCTACCTTCAAATGTCGTTTCTGCAGCCTCACGCTACCCAGCCAAGAGCTCCTGATAATTCATTTGTCCAAGCACATGTCGAATATGGACGATCCCAACGAAGCCGGCGACGAGGAGTCGAGAGCGAGTACTGTCGAAGATTCAGCGTCCGTACATTCCGAATACAGTGGAAGTGCGCCACCTCGAAAGTTCAACTGTCGCTACTGCGGCAAACAATTCACATACGAAAAAGCTCTAGCCACTCATATCGTTAAAAATCACCCGCCGGGCTCGGAGGTCAAAGGCGAGCCGCCGGATAAAAACACCTCCTCGGACTTGCTCAGCGAGGCGAACCAGAGCTTAAACGACACGGGAATGACCGAGGGCATGAACGACACGGGGATGACGGAGTCCGAGTCCAGCCCGGACGAGGAGGGCGAGGACGACAACACGTGCGACATCTGCGAGAAGCAGTTCTCGTACCGTCGCCTGCTGCTGCACCACAAGCGCACCAAGCACAACATGTCCTCTGGCACCAAGCGCGCCAAGATCACGCTCAAGGACTGCATGGTGCGCTGCCTCATCTGCGACATCGAGATGAAAGTGAGCGACATCAACGAGCACAATCAAACGCACATATCCGCCAACATGAAACCGAGGAACTTGTACACGTGCACGCTGTGCACCATGACGTTCAAGAGCTGCAGCGGCCTGGCGAACCACATCAAGCTAGTGCACAGACTGAAGCAGCAGGCGCCGAAATTAGATATGTCCGCCCCGAATCCGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAGCCCCTGGACAATGTTCAGGGTCACAACGGCTTTTCCGAGGCCGCCGCCACCGAAACGATACCTTTGGTGAACATGGAGGAGCTGACTTGCCACATCTGCGGCAAGCAGCTGCCAACGCTCATCTCGCTCAAGAGACACGTCAACTGGCACAAGAACGTCGGCAACAACATCGAGAAGCCGATGGAATGCTTTGTTTGCAAAGAGACGTTCAGATTCCAGTGTCACTACAAGATACACATGCGCGTCCACTACCACGACACCAACCTGGACCCCAAGCACCTCACCTGCCCCATCTGCAACCGCAAGAGCAAGCACTTGCGCGCCGCCCAGATGCACATGAACTACCACAAGCAGACCCGATTCAAGAATAAGGACTACGAGTGTTCCATTTGCAAACGAATCTTCCAACACCGCAAAGTCTACCTCTCGCACATGGCTGTCCACTTCAAAAAGGGCGACAGCGCCGCCAACACGATCGTCGGCTCCGAGCTCCCCATGAACGCGGACAGATCCGCATTCGACGGCACTAACACCTGCCACCTCTGCGGCAAGGTCTGCGACTCGGAGAACTCGCTCAAGCACCATCTCATCTGGCACAAATCTAAAACCCTCCTGTTCGGCGCGAGGCACCAGTGCGACATTTGCAGCGTAGTCTTCACTAACAAAAGACGCCTGGAACTCCACTACCGAACTCATTTCGAGGACGACAACGGGCCCTTCAAGTGCCACATTTGCGGGAAAGGCTACATAGTGGAGGACTACTGCAAGAAACACATCAAGGGACACAACTTCGATAATCAGTCGCACAAGAAGCGAATCGAGAAGCTGCGAAAGGATAAGGTGAAGTGTCCGATATGCTCGCGGTACTATCCCGACCTGGTTAAGCTCATTCGCCACCTGCGACGTACGCACCCCGAGAGCAAGATGATAAAAGAGGACCCGGACGCCCCTCCGCCCATGTACCACTCGTGCAAACTGTGCGCCAAGGTTTTCTTGGACGAGAGGAGACTGCAATCTCACGAGGAAGCCCATCTAAGGAAGCCAGAATTTTTCAAGTGTAAATTTTGCGGAAAGAAAACCATATCGCTGAAGAGTCACAGAATTCACATAAAGGGTCATCTGACTCAAAAGTATATCGACGACCCGCTGAAGTGCCCCCACTGCGACGAGACATTCAACAGGGGATACGACTTGCACTATCATCTTCGCGACACCCACGACATCACCGAAACTTGGATCGCCGAACGCGGCACCCAGACCCTGGACGGTCCTCTCAAGGAACTCCAGTGCGGCGTCTGCTACAAGGTCCTGGCCAGCAAGGGCAACTACGACAGGCACGTCGACTACCACAACTCCCTGCGATGCAACTACTGCTTCGAGTACTTCAACACCTCCCGATTCCTGGAGGGCCATCTCGCTTTCAGCTGCGAGAAGAAGAAACTCATAGGCGATACCGAGACTCATCCGAGAAAAATTAAGTGCGAGATTTGCTTCAAAGCTTTCCATCTGCAAGTCAAACTGGACTGTCATCTTCGGGTCAAACACGACATCAAAGTCTTCAGGGAGAAATCAGCCGGAAAGAGGGAGATCGTCTGCGACTACTGCTTCAAAGTATTCGAAAACGAGTACGCCCTGAGCAACCACAAATTGTATCATCGCACGATCGGCTACTACGGCTGCATATACTGCGCCCGAAAGTTCAACACGATGACCGCGTACAGGAAACATAAAAATCATCACTTCGCCCAGCTGCACGTCGACGACCCGGTGAAGTGCGAGCACTGCGACGAGACGTTCGTTGCGTTCCGCGAGATGATATACCACATGCGGGACGCGCACGGCGACGACAAGGAGTGGATCATCGAGCCGAAGCAGTCCATCGAGGAGAAGTGCCCCATCTGCGACAAGGTATTTTTCAATCTCCACCGCCACATCGACTACCACGAGGAGAACAGGTGCAAGAAATGCGGCGAGTATTTCTACTCCACCGTCGACTTCGACAACCACCTGTGCCCGATCGACTCCGACGAGGAGGTCGACGAGAGCAGCGGCTTCACCGACCTGCGGCCTAAATACGAGGAGTGCGACTTCTGCTTCAAGCCCACCACCAGGAAAAACTCCAAGAAGCTGCACGACAACATGCACCGCGGGTCGGGCGCCATCTCCTGCCGTTTCTGCTCCCAGAAGTTCAAAACTATGGACGCGTTCAACATCCACGCCTTCTCGCACAGGAGCAGGAAGTACAAGCTGAAGCCGATCAGGTGCAAGATGTGCCCCGAGGCGTTTGTCAAGTACGGGCCGTTCATGAAGCACATGCGGGACGTGCACAAGGCCCTGAAGAAGATGCACTACCGCGCGCGGGTGAAGGCCGAGCCGTGCGTCGTGTGCGGGCAGAGCTTCCCCAACCTGCACAACCACTACCGCGCGCACATGGACCACAAGTGCCCCTCCTGCCGCAAGTATTTCACGTCGAGCCGCGCCTTCTCCCAGCACCAGTGCGATGTGCCCGACGCCGACCCCACGAAGGTGTTCACGTGCGACGCCGACCTCAACCGCCTCATCGCCGAGTACGTGCCCAAGGACGAGCAGGACGACGAGAAGTACTACGGCTACGACGACAACGGCGACGACCCGCCACCCGAGCCCGAGCCCGCGCGCCCGCCGCGCCCGCGGGGCCGCCCCGTCAAGCCGCGCCCGCCGAAGCCCATCGGCCCGCCGAAGGCGGTCGGCCGGCCCCCGGGGCCCCGGACTTACAGGAACCCGAAGCTCGTCAAGCAAATCTGGCAGGGGCTCGGCAAGTCCGTCGCGGGCGCGCAGAGCTCGCAGGACGAGGACAGCCAGAACTCCGTGGACCCCGACGAGGGCGAGCTGCACGAGATGGTGCACGCCCCAATCATCTCCGACGTGCTGTCCCTCTACCAGAACAACGAGAAGAAAAAAGGTCGAAAAGACGACGACGAGGACAGCGACGTCGTCATGCTGTCCGACGACGAGTCCGGACCCGAGCGAGTTATACCCGTCGTCGTTTTGGACGACGATTGA
- Protein Sequence
- MALKLGKCRLCLKLGDFCSIFTADNNVQLAEMVMECARVKIYEGDGLPDKICNECIQKLSGAHIFKQQCERSDQELRRNYVPPPGFSISPPPPTPTNRQSSDSAFSSLATEVSKPSSSVESKVKAAPRGRKRSGDSIDDASVSSRSHDYRGVTKRVDELRTTHKRGRYTSDSDYEDNSAFYSAETDSDDVCDYKCKECPKSFKTQKSLTAHTKVHRRKINNQANVSRENDDLDTTYNSAADASVNEPNSTFETSKTFDDAMDVEDKLSCDKCNKTFKLKIMLKRHHETCGKTPTKTLQVALQPLELPTSSGAITCKMCSSLFKTVDNLAKHMRVVHAAALPPEELQKEKNVEAAISVPCIFCQQSFEEFLAYKTHIDECSEKRTLQSFDCPLCQRPLSRRHAYIAHIKSHFFPTTNTRFPNTPLKPETPTFKCRFCSLTLPSQELLIIHLSKHMSNMDDPNEAGDEESRASTVEDSASVHSEYSGSAPPRKFNCRYCGKQFTYEKALATHIVKNHPPGSEVKGEPPDKNTSSDLLSEANQSLNDTGMTEGMNDTGMTESESSPDEEGEDDNTCDICEKQFSYRRLLLHHKRTKHNMSSGTKRAKITLKDCMVRCLICDIEMKVSDINEHNQTHISANMKPRNLYTCTLCTMTFKSCSGLANHIKLVHRLKQQAPKLDMSAPNPADFCEVVVTKAEPLDNVQGHNGFSEAAATETIPLVNMEELTCHICGKQLPTLISLKRHVNWHKNVGNNIEKPMECFVCKETFRFQCHYKIHMRVHYHDTNLDPKHLTCPICNRKSKHLRAAQMHMNYHKQTRFKNKDYECSICKRIFQHRKVYLSHMAVHFKKGDSAANTIVGSELPMNADRSAFDGTNTCHLCGKVCDSENSLKHHLIWHKSKTLLFGARHQCDICSVVFTNKRRLELHYRTHFEDDNGPFKCHICGKGYIVEDYCKKHIKGHNFDNQSHKKRIEKLRKDKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPMYHSCKLCAKVFLDERRLQSHEEAHLRKPEFFKCKFCGKKTISLKSHRIHIKGHLTQKYIDDPLKCPHCDETFNRGYDLHYHLRDTHDITETWIAERGTQTLDGPLKELQCGVCYKVLASKGNYDRHVDYHNSLRCNYCFEYFNTSRFLEGHLAFSCEKKKLIGDTETHPRKIKCEICFKAFHLQVKLDCHLRVKHDIKVFREKSAGKREIVCDYCFKVFENEYALSNHKLYHRTIGYYGCIYCARKFNTMTAYRKHKNHHFAQLHVDDPVKCEHCDETFVAFREMIYHMRDAHGDDKEWIIEPKQSIEEKCPICDKVFFNLHRHIDYHEENRCKKCGEYFYSTVDFDNHLCPIDSDEEVDESSGFTDLRPKYEECDFCFKPTTRKNSKKLHDNMHRGSGAISCRFCSQKFKTMDAFNIHAFSHRSRKYKLKPIRCKMCPEAFVKYGPFMKHMRDVHKALKKMHYRARVKAEPCVVCGQSFPNLHNHYRAHMDHKCPSCRKYFTSSRAFSQHQCDVPDADPTKVFTCDADLNRLIAEYVPKDEQDDEKYYGYDDNGDDPPPEPEPARPPRPRGRPVKPRPPKPIGPPKAVGRPPGPRTYRNPKLVKQIWQGLGKSVAGAQSSQDEDSQNSVDPDEGELHEMVHAPIISDVLSLYQNNEKKKGRKDDDEDSDVVMLSDDESGPERVIPVVVLDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00744973;
- 90% Identity
- iTF_01217685;
- 80% Identity
- -