Parg000961.1
Basic Information
- Insect
- Plebejus argus
- Gene Symbol
- ZFX
- Assembly
- GCA_905404155.1
- Location
- FR989930.1:402750-408392[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.00015 0.012 16.5 1.5 1 23 251 273 251 273 0.98 2 27 1.5 1.1e+02 4.0 0.4 6 23 285 302 285 302 0.96 3 27 1.1 86 4.3 1.5 1 23 311 334 311 334 0.90 4 27 0.00011 0.0086 16.9 4.1 2 23 354 375 354 375 0.98 5 27 3e-05 0.0022 18.7 0.6 1 23 381 404 381 404 0.96 6 27 0.069 5.2 8.1 0.1 1 23 410 432 410 432 0.94 7 27 0.0016 0.12 13.3 0.1 1 23 438 460 438 460 0.93 8 27 2.7 2.1e+02 3.1 1.0 1 23 577 599 577 599 0.91 9 27 3.3e-05 0.0025 18.6 2.2 2 23 606 628 605 628 0.92 10 27 6.1e-05 0.0046 17.7 1.7 1 23 634 656 634 656 0.96 11 27 9.9e-06 0.00074 20.2 0.6 1 23 662 684 662 684 0.97 12 27 0.0022 0.17 12.8 0.1 1 23 690 712 690 712 0.98 13 27 0.019 1.4 9.9 1.7 1 23 718 740 718 740 0.95 14 27 0.31 23 6.1 6.0 1 23 746 769 746 769 0.92 15 27 0.53 40 5.4 0.1 2 23 826 846 825 846 0.95 16 27 0.00021 0.016 16.0 0.6 1 23 852 875 852 875 0.91 17 27 8.2e-05 0.0062 17.3 1.7 1 23 881 903 881 903 0.94 18 27 0.00026 0.02 15.8 0.3 1 23 909 931 909 931 0.97 19 27 0.00047 0.035 15.0 1.7 1 23 937 959 937 959 0.97 20 27 0.00066 0.05 14.5 0.3 6 23 969 986 968 986 0.99 21 27 2.8 2.1e+02 3.1 0.5 1 23 1046 1067 1046 1067 0.86 22 27 0.02 1.5 9.8 0.5 3 23 1200 1221 1199 1221 0.95 23 27 0.00021 0.015 16.1 0.2 1 23 1227 1249 1227 1249 0.97 24 27 0.0098 0.74 10.8 0.1 1 23 1255 1277 1255 1277 0.97 25 27 0.00019 0.014 16.2 3.1 1 23 1283 1305 1283 1305 0.96 26 27 6.4e-05 0.0048 17.7 0.2 1 23 1311 1333 1311 1333 0.96 27 27 0.00018 0.013 16.3 0.5 2 23 1339 1361 1338 1361 0.95
Sequence Information
- Coding Sequence
- ATGAATATTGAGAGTGAAAAAATGCTTGTTGTAAATTCAAGTGCAAATTTGTCACAAGAGAGCCAAAGTTTCGCGGAAACCTGCAATGTGTTGAATGGTCTAGAAAATTTCTCAAATGTCTGCCGAACATGTGCAAATGTAACAGAGTTTGTTATACCCATATTCGTTGATGAGGGTCTACACAATAACTTGGCACAAAAAATTCAGCAACATCTTCCAATAAAGATATCAGAGGATGATGTTCTGCCGCATGTGGTGTGCTACCAGTGTGCGAGCACGATCCTCGCCTGGCATGACCTTGTGGAGTGTTGCCTCCAGGCTGACGTGACGCTGCAGCAGCGAATATCTTCACTTACTAGTGAAACGGAGCTGAAGAAAAACTCAAACCAAAGATTAGAAGATAATGAAGAAAGTTCTGCCAAAAAAGGGGAGGATAAACTTTTAAGCCTAGTATATGACATTCTTCGTGAGTACCTACAAGTAATTATGGAATTAGATGAAAATAATATTATGGATTTAGATTATGTGTGCCAGGTGTGCGCCCACAAACCTGCAGCTAAAACAATAGACAACTTGGTGAAACATCTCCAGTTGTCTCATAGCACAGAACTCTGCAACCGCGAGTCTATACAGAACTTCATCAGGAACAATATAACTTTTGAAGAAACTTTAAGCATGGAAGATCAAGATGACCGTGGGAGTGATACAGACAAAGGAAACAACAGGGAGGCCCGCGCCGAATTGCCAACATATTTCTGTCCCTACTGCGACAGCGCCTTCTCCACCCCCACTAGGCTGTTACATCACATCAACAGACACATAGATATATCGGCGGAGAGTGTGCTAACATGCTGCGGGGAAAGCTTCGACAAAAAATCCTTTGCGCTCCACCTGCAGCGCAGGCACGTAGCGCGCGTCGTCGTGGGCCCGCACGTGTGCCGGAGCTGCTCTCACAGCGCGCGCACCGAGCACGACCTGCAAGCGCACGTGGCCGCCGAGCACCGCGCTCAGCCCGCCGCCCGCCCCGAGCCTCGCCGTCGCCGCAAGCACGCGCCCGCCACCTGCCCCCGGTGCCGCAAAACGTTCTCCAACAAACACAACATGCTGGTGCATCTGAGATCGCACGACGCGAGCGAGCTGTTCGCGTGCGACAAATGCGACAGGCGCTACAGGACCCAGAGCGGCCTGAGCGAGCACCGCCGGATCGTCCACGAGGGCGTGATGCGGCACGTGTGCGCGACGTGCGGTGAGGCCTTCCCCACGCGCGGCGCGCGCGACGTGCACGCCCGCCTGCACTCCGGCGCGCGCCCCTTTGCCTGCGACTACTGCGGCAAGGCCTACCGCGCCAAGAACACGCTGGACCGACACGTCGACGCGCACTTGGACGTCCGGAAGTGCGCGCCCCGCCCCGGCTCTGAGCCGGAGCCGAGCGAGGCGGACGGGGAGCGCGACGACGACGACGAGCCCCTAGCGAGCGTGGCGGGCAGAAGGGCCGCTGAGCTGTACGGAAACTTCTACGACGCCCTCGTCAATTTTCGGGACCATTTCGCTACCGAGCACGAGGGGAGCTCCCCGGACTCCGGCGACTCCGACGGGGGCGGGAGCGACGAGGCGGTCGGCGACGAGTACGACGACCTCACCCGGGGCGGCGCGAGGAGAGGTGGGGCGAGCGCTGAGACGGACCTCGAGCTCGCCCGCGCGCAGACGAGGGTCGACGGGCGGGCGTACTACGCGTGCGGGACGTGCGGCAAGCACCTCGGCTCGGCGCAGACCTACCTGTTCCACCGGCGCATCCACACGGACGAGCGACCGTGCGTGTGCCACGTCTGCGGCAAGCAATTCCGCACGCCCAACGGCCTGCGCCGCCACCTCGCTGAGACCCACGAGCGCCGCCAGTTCCACGCCTGCGCGCTGTGCCACAGGACCTTCGCCAACTCCCAGAACCTCCGGGCGCACGCGCGCATCCACACCGGTGAGAAGCCGTTCGTGTGCGCGCAATGCGGGAAGCGCTTCACGCAGAGCGGCTCCCTGCACGCGCACGCGCGCGGCCACAGCGCACTGCACCCGTACCGCTGCGCCGAGTGCGGGGCGCAGTTCAAGCTGCGCGCCGGCCTCGCGCGCCACGCGCTGCGGCACACGGGCGAGCGGCCGCACGCCTGCGACGCGTGCGCGCGTGCCTTCCGTCACCGCCACGAGCTCGCCGCGCACGCGCTCACGCACACCGACGCCCGCCCGCACGCCTGCCGCCTGTGCGGCTCCGCCTTCCGCCAGCGCAAGGCGCTGCGCCACCACTGCAGGCGCGTCCACGAGACCGACGCCGCGGACGCGCCCGGGCCCGTCTACGACGACGTCGGCCCTGCGAACGTAAAAGACGAGATCGGGGACGAGAGCCGATCGAGCGGCCCCGCGCAGCGAAAGCCGGCCGAAGAGTCGGGGAAGCCGACTACGCTTCTGAGCGACGGAAAAAAATACGTGGAGTGCACTCTGTGCGACAAATACGTCCCGGCCGCGTCCTGGCGCCGCCACCGGCGGTCCCACCAGGGCGGGCGGCCGCACAGCTGCCACGTGTGCGGGCTGGGGTTCGCCGACCGCGGGAACCTCGCGCGCCACGCGTCGGAGCGCCACCGCCGCCTGCGCCCACACGCCTGCGCCCTCTGCGACCGGACGTTCGCGCGCAAGTCGCACCTGCGGGACCACGCGGCGTCGCACTCGGCCGCGCGCGACCACGTGTGCGACGTGTGCGGCCGCGCCTCCAAGTCCGCCGCCGCGCTGCGCATGCACAAGAGGATGCACGACGACACGTTCGGGTTTCACTGCGCATTCTGCGATGCTCGATTCAGGAGGAGGAGCCAGCTCGTGGCGCACACGTCCGTGCACACCGGAGAGAGGGCCCACGCGTGCGCCTGCGGCCGGACCTTCCGCCTGCGCAGCCAGCTCAACGCGCACGCCCGCACGCACATCGACGGCCGACCGCGGGGGGACAGACCGGGCCCCGATCCGCCGTTCGACCGGCCCGACCCCGCCGAGGCGGCGGTCCCCCCTCCTGTGCCCCCGCGGACATGCGCCTACTGCCGGGCGGAGTGCCCCGAGCCCCAGCTCAAGGAGCACCTGATATCGACGCACTCGGAGCTGCTGTTCCGCTGCGACGAGTGCGACAGCTACGTCGACCGCCAGGACTTCGTCGAGCACATGTCGCAGCACGCCGTCGAGTACGCCGCCGACGCCGCGGGGCCGCTCGCCGCCGCGGAGGAGACTGACGAGGAGGCCCGCCCTGCGGACCCCGTGCCTGGGGACCCCGGGGGACTGGGGGGCGACCGCGTGGGAGACGGGGTCGAAAATGAGGACGGAGAAACGACGGGAGAGGAAAGAGACGGGGGCGTCTCGGTGAACGGGGATGACTTCTCGGACCACAGCGATGCGGAGTACTTCGGCGAGCTGCCCGACTCCGTGTTCGAGGCCATCGAGGACTCGCAGGACACGCAGGCGGCTGACGACGGCGACCGCCTCTCGCGGACCGACGCCGCGACCCCCGGCGTCCCCGCGGCGCCGCTCGCGGGTGCCCCCGCCGACGGGAGGAAAACGAAAAAGGAGCGTGCGTGCCCCGTCTGCTCGAAGGTGTACACCGCCAGCTCCAGCTACTTCTACCATGTGAAGCACGCACACGGCGCCGACCGGCAGCACGAGTGCGACGTCTGCGGGAGGAGGTTCAGCGCCAAACCGACGCTGGCGCAGCACCTGCTCATCCACGCGGCGGAGCGGCCGTACGCGTGCGCGCAGTGCGGCAACACGTTCCGCGCGCGCGCCGCTCTCTACGTGCACGAGCAGACGCACGGCGGGCGCAGGACGCACGCGTGCGGGGAGTGCGGCCGCTCGTTCCGCTGGCGCGCGCACCTCGAGCGGCACCGGCGGCGGCACGAGGGTGGGCGCGAGCACGCGTGCGACGCCTGCGGGCGGGCCTTCAGCGTGCGCGCCGACTTGCTGCGGCACGTGCGCACGCACGCGGCCGCGGCGCTGCCGTGCCCGCACTGCGAGCTGCGGTTCGCGCAGCCCCGCTACCTGCGCGCGCACCTCAACAACAAACACGCCGCCGAAGGAGGAGGAGTCGTGAAATGA
- Protein Sequence
- MNIESEKMLVVNSSANLSQESQSFAETCNVLNGLENFSNVCRTCANVTEFVIPIFVDEGLHNNLAQKIQQHLPIKISEDDVLPHVVCYQCASTILAWHDLVECCLQADVTLQQRISSLTSETELKKNSNQRLEDNEESSAKKGEDKLLSLVYDILREYLQVIMELDENNIMDLDYVCQVCAHKPAAKTIDNLVKHLQLSHSTELCNRESIQNFIRNNITFEETLSMEDQDDRGSDTDKGNNREARAELPTYFCPYCDSAFSTPTRLLHHINRHIDISAESVLTCCGESFDKKSFALHLQRRHVARVVVGPHVCRSCSHSARTEHDLQAHVAAEHRAQPAARPEPRRRRKHAPATCPRCRKTFSNKHNMLVHLRSHDASELFACDKCDRRYRTQSGLSEHRRIVHEGVMRHVCATCGEAFPTRGARDVHARLHSGARPFACDYCGKAYRAKNTLDRHVDAHLDVRKCAPRPGSEPEPSEADGERDDDDEPLASVAGRRAAELYGNFYDALVNFRDHFATEHEGSSPDSGDSDGGGSDEAVGDEYDDLTRGGARRGGASAETDLELARAQTRVDGRAYYACGTCGKHLGSAQTYLFHRRIHTDERPCVCHVCGKQFRTPNGLRRHLAETHERRQFHACALCHRTFANSQNLRAHARIHTGEKPFVCAQCGKRFTQSGSLHAHARGHSALHPYRCAECGAQFKLRAGLARHALRHTGERPHACDACARAFRHRHELAAHALTHTDARPHACRLCGSAFRQRKALRHHCRRVHETDAADAPGPVYDDVGPANVKDEIGDESRSSGPAQRKPAEESGKPTTLLSDGKKYVECTLCDKYVPAASWRRHRRSHQGGRPHSCHVCGLGFADRGNLARHASERHRRLRPHACALCDRTFARKSHLRDHAASHSAARDHVCDVCGRASKSAAALRMHKRMHDDTFGFHCAFCDARFRRRSQLVAHTSVHTGERAHACACGRTFRLRSQLNAHARTHIDGRPRGDRPGPDPPFDRPDPAEAAVPPPVPPRTCAYCRAECPEPQLKEHLISTHSELLFRCDECDSYVDRQDFVEHMSQHAVEYAADAAGPLAAAEETDEEARPADPVPGDPGGLGGDRVGDGVENEDGETTGEERDGGVSVNGDDFSDHSDAEYFGELPDSVFEAIEDSQDTQAADDGDRLSRTDAATPGVPAAPLAGAPADGRKTKKERACPVCSKVYTASSSYFYHVKHAHGADRQHECDVCGRRFSAKPTLAQHLLIHAAERPYACAQCGNTFRARAALYVHEQTHGGRRTHACGECGRSFRWRAHLERHRRRHEGGREHACDACGRAFSVRADLLRHVRTHAAAALPCPHCELRFAQPRYLRAHLNNKHAAEGGGVVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00164568; iTF_00935010; iTF_00404019; iTF_00934042;
- 90% Identity
- iTF_00935010;
- 80% Identity
- -