Basic Information

Gene Symbol
ZFX
Assembly
GCA_905147365.1
Location
LR990260.1:22409118-22417776[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 9e-05 0.0063 17.3 1.2 1 23 250 272 250 272 0.98
2 27 3.5 2.4e+02 2.9 0.3 6 23 284 301 284 301 0.93
3 27 0.31 22 6.2 0.6 1 23 310 333 310 333 0.91
4 27 0.00012 0.0087 16.9 4.1 2 23 353 374 353 374 0.98
5 27 0.00017 0.012 16.5 0.7 1 23 380 403 380 403 0.96
6 27 0.075 5.3 8.1 0.1 1 23 409 431 409 431 0.94
7 27 0.00041 0.029 15.2 0.1 1 23 437 459 437 459 0.95
8 27 0.49 34 5.6 1.4 1 23 582 604 582 604 0.95
9 27 3.6e-05 0.0025 18.6 2.2 2 23 611 633 610 633 0.92
10 27 5.6e-05 0.0039 18.0 2.6 1 23 639 661 639 661 0.96
11 27 1.1e-05 0.00075 20.2 0.6 1 23 667 689 667 689 0.97
12 27 0.0024 0.17 12.8 0.1 1 23 695 717 695 717 0.98
13 27 0.02 1.4 9.9 1.7 1 23 723 745 723 745 0.95
14 27 0.33 23 6.1 6.0 1 23 751 774 751 774 0.92
15 27 0.27 19 6.4 0.1 2 23 833 853 832 853 0.96
16 27 0.00024 0.017 16.0 0.3 1 23 859 882 859 882 0.89
17 27 8.9e-05 0.0063 17.3 1.7 1 23 888 910 888 910 0.94
18 27 0.00064 0.045 14.6 0.3 1 23 916 938 916 938 0.97
19 27 0.0016 0.12 13.4 1.7 1 23 944 966 944 966 0.96
20 27 0.00071 0.05 14.5 0.3 6 23 976 993 975 993 0.99
21 27 3 2.1e+02 3.1 0.5 1 23 1055 1076 1055 1076 0.86
22 27 0.012 0.82 10.7 0.6 3 23 1204 1225 1203 1225 0.96
23 27 0.00022 0.016 16.1 0.2 1 23 1231 1253 1231 1253 0.97
24 27 0.00036 0.025 15.4 0.1 1 23 1259 1281 1259 1281 0.97
25 27 0.0002 0.014 16.2 3.1 1 23 1287 1309 1287 1309 0.96
26 27 1.4e-05 0.00096 19.9 0.4 1 23 1315 1337 1315 1337 0.96
27 27 0.00019 0.013 16.3 0.5 2 23 1343 1365 1342 1365 0.95

Sequence Information

Coding Sequence
ATGAATATTGATAGTGAAAAAATGCTTGTTGTAAATTCAAGTGCAAATTTGTCGCAAGAAAGCCAAAGTTTCGCGGAAACCTGCAATGTGTTAGACGGTCTAGAAAATTTGGCAAATGTCTGCCGAACATGTGCAAATGTAACAGAGTTTGTTATACCCATATTCGTCGGTGAGGGTCTACACAATAACTTGGCACAAAAAATTCAGCAACATCTTCCAATAAAGATATCAGAGGATGATGTTCTGCCGCACGTGGTCTGCTACCAGTGTGCCAGCACTATCCTCGCCTGGCACGACCTTGTGGAGTGTTGCCTCCAGGCTGACGTGACGCTGCAGCAGCGAATATCTTCACTTACTAATGAAACAGAGCTGAAAAAAAATTCAAACCAAAGATTAGAGGATAATGAAGAAAGTTCTGCCAAAAAAGGGGAGGATAAACTTTTAAGCCTAGTATATGACATTCTTCGTGAGTACCTACAGCTTATGGAATTAGACGAAAATAATATTATGGATTTGGATTACGTATGCCAGGTCTGCACCCAAAAACCTGCAGCTAAAACAATAGACAACTTGGTGAAACACCTCCAGTTGTTTCATAGCACAGAACTCTGCAACTCGGAGTCTATTCACAACTTCATCAGGAACAATATAACTTTTGAAGAATCTTTAAGCACGGAAGACCGAGACGACCGTGAGAGTGATACAGACAAAGGAATCAACAAAGAGGCCGGCACCGACTTGCCGGCATACTTCTGCCCCTACTGCGACAGCGCCTTCTCCACTCCCACTAGGTTGATACATCACATCAACAGACACATAGATATATCGACGGAGAACGTGCTGACATGCTGCGGGGAAAGCTTCGACAAAAAATCCTTTGCGCTCCACCTGCAGCTCAGGCACGTAGCGCGTGTCGTCGCGGGCCCGTACGTGTGCCGGAGCTGCTCCCACAGCGCGCGCACCGAGCACGACCTGCAGGCGCACGTGGCCGCCGAGCACCGCGCGCAGCCCGCCGCCCGCCCCGAGCCGCGCCGCCGCCGCTCGCACGCGCCCGCCACCTGCCCCCGGTGCCGAAAGACTTTCTCCAACAAACACAACATGCTGGTGCATCTGAGGTCGCACAACGCGAGCGAGCCGTTCGCGTGCGACAGATGCGACAGGCGCTACAGGACCCGGAGTGGCCTGAGTGAGCACCGCCGGATCGTCCACGAGGGCGTGATGCGGCACGTGTGCGCGACGTGCGGCGAAGCCTTCCCCACGCGCGGCGCGCGCGACGTGCACGCCCGCCTGCACTCCGGCGCGCGCCCCTTCGCCTGCGACTACTGCGGCAAGGCCTACCGCGCCAAGAACACCCTGGACCGCCACATCGAGGCCCACCTGGACGTCCGGAAGTACCCGTGCGCGCCCCGTCCCGGCTCCGAGCCGGCGCTGAGCGAGACGGCCGGGGAGCGCGCCGATCACGACGACGACGACGATGAGCCCCTGGCGAGCGTGGCGGGAAAAAAGGCCGCCGAGCTGTACGGAAACTTCTACGGCGCCCTCGTAAACTTTCGGGACCATCTCGCTACCGAGCACGAGGGGAGCTCCCCTGACTCCGGCGACTCCGACGGGAGTGGGAGCGACGAGGCGGTCGGCGACGAGCACGAGGACCTCACCCGGGGCGGCGCGAGAGGAAGGGGACCGAGCGCCGAGACCGACCTCGAGCTCGCCCGCGTGCAGACGAGGGTCGACGGACGGGCGTACTACGCATGCGGGACGTGCGGCAAGCACCTCAGCTCGGCGCAGACCTACCTGTTCCACCGGCGCATCCACACGGACGAGCGGCCGTGCGTGTGCCACGTCTGCGGCAAGCAGTTCCGTACGCCCAACGGCCTGCGCCGCCACCTCGCCGAGACCCACGAGCGCCGCCGGTTCCACGCGTGCGCGCTGTGCCACAGGACCTTCGCCAACTCCCAGAACCTCCGTGCGCACACGCGCATTCACACCGGCGAGAAGCCGTTCGTGTGCGCGCAATGCGGGAAGCGCTTCACGCAGAGTGGCTCCCTTCACGCGCACGCGCGCGGCCACAGCACGCTGCACCCGTACCGCTGCGCCGAGTGCGGAGCGCAGTTCAAGCTGCGCGCCGGCCTCGCACGCCACGCGCTGCGGCACACGGGCGAGCGGCCGCACGCTTGCGACGCGTGCGCGCGCGCCTTCCGCCACCGCCACGAGCTCGCAGCGCATGCGCTCACGCACACCGACGCCCGCCCGCACGCCTGTCGCCTCTGCGGCTCCGCCTTCCGCCAGCGCAAGGCGCTGCGCCACCACTGCAGGCGCGTCCACGAGACCGACGCCGCCGACGCGCCCGGTCTAGTCTACGACCACGTCGGCCCGTATGATGCGAACGTAAAAGACGAGATCGGGGACGAAAGTCGATCGAGCGACCCCGCGCAGCGACAGCCGGCCGGCGAGTCGAGGAAGCCGACTACGCACCCGAGTGACGGAAAAGAATACGTGGAGTGCACTCTGTGCGACAAAAATGTCCCGGCCGCGTCCTGGCGCCGCCACCGGCGGTCCCACCGAGGCGCGCGGCCGCACAGCTGCCACGTGTGCGGGCTGGGGTTCGCCGACCGCGGGAACCTCGCGCGCCACGCGGCGGAGCGCCACCGCCGCCTGCGCCCGCACGCCTGCGCCCTCTGCGACCGGACGTTCGCGCGCAAGTCGCACCTGCGGGACCACGCGGCGTCGCACTCGGCCGCACGCGACCACGTGTGCGACGTGTGCGGCCGCGCCTCCAAGTCCGCCGCCGCGCTGCGCATGCACAAGAAGATGCACGACGACACGCTCGGGTTTCACTGCGCGTTCTGCGACTCTCGATTCAGGAGGAAGAGCCAGCTCGTGGCGCACGCGTCCGTGCACACCGGGGAGAGGGCCCACGCGTGCGCCTGCGGCCGGACCTTCCGTCTGCGCAGTCAGCTCAACGCGCACGCCCGCACGCACGACGACAGGCGACCGCGGGGAGACATAACGGGCCCCGATCCGACCAGCTGTGATATCGAAGCTGCTATTTTGCAGGCGGCGGCCCCCCCTCCGGTGCCCCCGCGGACCTGCACCTACTGCCGGGCGGAGTGCCCCGAGCCCCAACTCAAGGAGCATCTGATATCGACGCACTCGGAGCTACTGTTCCGTTGCGACGAGTGCGACAGCTACGTCGACCGCCAGGACTTCGTCGAGCACATGTCGCAGCACGCCGTCGAGTACGCCGCCGACGCCGCGGGGCCGCTCGATGACGCGGGGGAGACCCGCCCAGCCGACGTGCCCGGGGACCCCGGGGGACGGGGGGGCGACCGCACGGGAGACGGGGTCGAAAATGAGGACGGAGAAGCGACGGGACAGGAGAGAGACGGGGGCGCCTCGGTGAACGAAGACGACTTCTCGGACCGCAGCGACGCGGAGTACTTCGGCGAGCTGCCCGACTCCGTGTTCGAGGCCATCGAGGACTCGCAGGACACGCACGCGGCCGACGACGGCGACCGCCTCTCGCGGACCGACGCCGCGACCCCCACCGTCCCCGTGGCGCCGCTCGCGGGACCCCCCGTCGACGGGAGGAAAACGAAAAAGGAGCGGGCGTGCCCCGTCTGCTCGAAGGTGTACACCGCCAGCTCCAGCTACTTCTACCACCTGAAACACGCGCACGGCGCCGGCCAGCAGCACGAGTGCGACGTCTGCGGGAGGAGGTTCAGCGCCAAGCCGACGCTGGCGCAGCACCTGCTCATCCATGCGGCGGAGCGGCCGTACGCGTGCGCGCAGTGCGGCAAGACGTTCCGCGCGCGCGCCGCTCTCTACGTGCACGAGCAGACGCACGGCGGGCGCAGGACGCACGCGTGCGGGGAGTGCGGGCGCTCGTTCCGCTGGCGCGCGCACCTCGAGCGGCACCGGCGGCGGCACGAGGGCGGGCGCGAGCACGCGTGCGACGTCTGCGGGCGGACATTCAACGTGCGCGCTGACCTGCTGCGGCACGCGCGCACGCACGCGGCGGCCGCGCTGCCGTGCCCGCACTGCGAGCTGCGGTTCGCGCAGCCCCGCTACCTGCGCGCGCACCTCAACAACAAGCACGCCGCCGAGGGAGGAGTCGTGAAATGA
Protein Sequence
MNIDSEKMLVVNSSANLSQESQSFAETCNVLDGLENLANVCRTCANVTEFVIPIFVGEGLHNNLAQKIQQHLPIKISEDDVLPHVVCYQCASTILAWHDLVECCLQADVTLQQRISSLTNETELKKNSNQRLEDNEESSAKKGEDKLLSLVYDILREYLQLMELDENNIMDLDYVCQVCTQKPAAKTIDNLVKHLQLFHSTELCNSESIHNFIRNNITFEESLSTEDRDDRESDTDKGINKEAGTDLPAYFCPYCDSAFSTPTRLIHHINRHIDISTENVLTCCGESFDKKSFALHLQLRHVARVVAGPYVCRSCSHSARTEHDLQAHVAAEHRAQPAARPEPRRRRSHAPATCPRCRKTFSNKHNMLVHLRSHNASEPFACDRCDRRYRTRSGLSEHRRIVHEGVMRHVCATCGEAFPTRGARDVHARLHSGARPFACDYCGKAYRAKNTLDRHIEAHLDVRKYPCAPRPGSEPALSETAGERADHDDDDDEPLASVAGKKAAELYGNFYGALVNFRDHLATEHEGSSPDSGDSDGSGSDEAVGDEHEDLTRGGARGRGPSAETDLELARVQTRVDGRAYYACGTCGKHLSSAQTYLFHRRIHTDERPCVCHVCGKQFRTPNGLRRHLAETHERRRFHACALCHRTFANSQNLRAHTRIHTGEKPFVCAQCGKRFTQSGSLHAHARGHSTLHPYRCAECGAQFKLRAGLARHALRHTGERPHACDACARAFRHRHELAAHALTHTDARPHACRLCGSAFRQRKALRHHCRRVHETDAADAPGLVYDHVGPYDANVKDEIGDESRSSDPAQRQPAGESRKPTTHPSDGKEYVECTLCDKNVPAASWRRHRRSHRGARPHSCHVCGLGFADRGNLARHAAERHRRLRPHACALCDRTFARKSHLRDHAASHSAARDHVCDVCGRASKSAAALRMHKKMHDDTLGFHCAFCDSRFRRKSQLVAHASVHTGERAHACACGRTFRLRSQLNAHARTHDDRRPRGDITGPDPTSCDIEAAILQAAAPPPVPPRTCTYCRAECPEPQLKEHLISTHSELLFRCDECDSYVDRQDFVEHMSQHAVEYAADAAGPLDDAGETRPADVPGDPGGRGGDRTGDGVENEDGEATGQERDGGASVNEDDFSDRSDAEYFGELPDSVFEAIEDSQDTHAADDGDRLSRTDAATPTVPVAPLAGPPVDGRKTKKERACPVCSKVYTASSSYFYHLKHAHGAGQQHECDVCGRRFSAKPTLAQHLLIHAAERPYACAQCGKTFRARAALYVHEQTHGGRRTHACGECGRSFRWRAHLERHRRRHEGGREHACDVCGRTFNVRADLLRHARTHAAAALPCPHCELRFAQPRYLRAHLNNKHAAEGGVVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01217675;
90% Identity
iTF_00935010;
80% Identity
-