Csei006936.1
Basic Information
- Insect
- Cyaniris semiargus
- Gene Symbol
- ZFX
- Assembly
- GCA_905187585.1
- Location
- LR994550.1:610565-615614[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 8.5e-05 0.0064 17.3 1.2 1 23 249 271 249 271 0.98 2 27 1.3 1e+02 4.1 0.6 6 23 283 300 283 300 0.96 3 27 1.2 87 4.3 1.5 1 23 309 332 309 332 0.90 4 27 0.0001 0.0077 17.1 3.2 3 23 353 373 352 373 0.98 5 27 0.00016 0.012 16.5 0.7 1 23 379 402 379 402 0.96 6 27 0.58 44 5.3 0.0 1 23 408 430 408 430 0.93 7 27 0.0003 0.023 15.6 0.1 1 23 436 458 436 458 0.96 8 27 0.46 35 5.6 1.4 1 23 578 600 578 600 0.95 9 27 3.3e-05 0.0025 18.6 2.2 2 23 607 629 606 629 0.92 10 27 6.2e-05 0.0047 17.8 1.7 1 23 635 657 635 657 0.96 11 27 1e-05 0.00076 20.3 0.6 1 23 663 685 663 685 0.97 12 27 0.0023 0.17 12.9 0.1 1 23 691 713 691 713 0.98 13 27 0.013 1 10.4 2.5 1 23 719 741 719 741 0.95 14 27 0.31 24 6.1 6.0 1 23 747 770 747 770 0.92 15 27 0.38 28 5.9 0.2 2 23 831 851 830 851 0.96 16 27 0.00022 0.017 16.0 0.3 1 23 857 880 857 880 0.89 17 27 8.3e-05 0.0063 17.4 1.7 1 23 886 908 886 908 0.94 18 27 0.0006 0.046 14.7 0.3 1 23 914 936 914 936 0.97 19 27 0.00063 0.048 14.6 1.0 1 23 942 964 942 964 0.96 20 27 0.00067 0.051 14.5 0.3 6 23 974 991 973 991 0.99 21 27 2.8 2.1e+02 3.1 0.5 1 23 1057 1078 1057 1078 0.86 22 27 0.011 0.83 10.7 0.6 3 23 1189 1210 1188 1210 0.96 23 27 0.0018 0.13 13.2 0.1 1 23 1216 1238 1216 1238 0.97 24 27 0.00034 0.025 15.5 0.1 1 23 1244 1266 1244 1266 0.97 25 27 0.00019 0.015 16.2 3.1 1 23 1272 1294 1272 1294 0.96 26 27 0.00013 0.0097 16.8 0.2 1 23 1300 1322 1300 1322 0.96 27 27 0.00041 0.031 15.2 0.4 2 23 1328 1350 1327 1350 0.95
Sequence Information
- Coding Sequence
- ATGAATATTGAGAGTGAAAAAATGCTTGTAAATTCAAGTGCAAATTTGTCGCAAGAGAGCCAAAGTTTCGAGGAAACCTGCAATGTGTTGAATGGTCTAGAAAATTTAACAAATGTCTGCCGAACATGTGCAAATGTAACAGAGTTTGTTATACCCATATTCGTCGGTGAGGGTCTACACAATAACTTGCCACAAAAAATTCAGCAACATCTTCCAATAAAGATATCAGAGGATGATGTTCTGCCGCATGTGGTGTGCTACCAGTGCGCCAGCACTATCCTCGCCTGGCATGACCTCGTGGAGTGTTGCCTCCAGGCTGACGTGACACTGCAGCAGCGAATATCTTCACTTACTAATGAAACAGAGCTGAAAATAAATTCAAACCAAAGATTAGAGGATAATGAAGATAGTTCTGCCAAAAAAGGGGACGATAAACTTTTAAGCCTAGTATATGACATAATTCGTGAGTACCTACAACTTATGGAATTAGATGAAAATAATATTATGGATTTAGATTACGTGTGCCAGGTCTGTGCTCACAAACCTGCAGCAAAAACAATAGACAACTTGGTTAAACACCTCCAGTTATCTCATAGCACGGAACTCTGCAACTCGGAGTCTATACAGAACTTCATTAGGAACAATATAACTTTTGAAGAATCTTTAAGCACGGAAGACCAAGATGACCATTGGAGTGATACAGACAAAGGAATCAATAAAGAGGCCGGCACCGACTTGCCAGCATACTTCTGCCCCTACTGCGACAGCGCCTTCTCCACACCTACTAGGCTGATACATCACATCAACAGACACATAGATATATCGACAGAGAGTGTGCTAACATGCTGCGGGGAAAGCTTCAACAAAAAATCCTTTGCGCTCCACCTGCAGCGCAGGCACGTGGCGCGCGTCGTCGCGGGCCCGCATGTGTGCCGGAGCTGCTCCCACAGCGCGCGCACCGAGCACGACCTGCAAGCGCACGTGGCCGCCGAGCACCGCGCGCAGCCCGCCGCCCGCCCCGAGCCGCGCCGTCGCCGCTCGCACGCGCCCGCCATCTGCCCCCGGTGCCGCAAGACTTTCTCCAACAAACACAACATGCTGGTGCATCTGAGGTCGCACAACGCAAGCGAGCCGTTCGCGTGCGACAGATGCGACAGGCGCTACAGGACCCGGAGCGGCCTGAGCGAGCACCGCCGGATCGTCCACGAGGGCGTGATGCGGCACGTGTGCGCAGCGTGCGGCGAGGCCTTCCCCACGCGCGGCGCGCGCGACGTGCACGCCCGCCTGCACTCCGGCGCGCGCCCCTACGCCTGCGACTACTGCGGCAAGGCCTACCGCGCCAAGAACACGCTGGACCGCCACATCGAAGCGCACTTGGACGTCCGGAAGTGCGCGCCCCGCCCCGGCCTCGCAGCGGCGCCGAGCGAGACGGCCGGGGAGCGCGTCGATCACGACGACGACGACGAGCCCCTGGCGAGCGTGGCGGGGAGAAAGGCCGCCGAGCTGTACGGAAACTTCTACGGCGCCCTCGTAAATTTTCGGGACCATCTCGCTACCGAGCACGAGGGGAGCTCCCCGGACTCCGGTGACTCCGACGGGGGCGGGAGCGACGAGGCAGTCGGCGACGACTACGACGACCTCACTCGAGGCGGCGCGAGAAGGGGGGGGCCGAGCGCCGAGACGGACCTCGAGCTCGCCCGCGCGCAGACGAGGGTCGACGGGCGGGCGTACTACGCGTGCGGGACGTGCGGCAAGCACCTCAGCTCAGCGCAGACCTACCTGTTCCACCGGCGCATCCACACGGACGAACGGCCATGCGTGTGCCACGTCTGCGGCAAGCAGTTCCGCACGCCCAACGGCCTGCGCCGCCACCTCGCCGAGACCCACGAGCGCCGCCGGTTCCACGCCTGCGCGCTGTGCCACAGGACCTTCGCCAACTCCCAGAACCTCCGGGCGCACGCGCGCATCCACACCGGCGAGAAGCCGTTCGTGTGCGCGCAGTGCGGGAAGCGCTTCACGCAGAGCGGCTCCCTGCACGCGCACGCGCGCGGCCACAGCGCGCTGCACCCGTACCGCTGCGCCGAGTGCGGAGCGCAGTTCAAGCTGCGCGCCGGCCTCGCGCGCCACGCGCTGCGGCACACGGGCGAGCGGCCGCACGCATGCGACGCGTGCGCGCGCGCTTTCCGCCACCGCCACGAGCTCACCGCGCACGCGCTCACGCACACCGACGCCCGCCCGCACGCCTGTCGCCTCTGCGGCTCCGCCTTCCGCCAGCGCAAGGCGCTGCGCCACCACTGCAGACGCGTCCACGAGACCGATGCCGCGGACGCGCCCGGCCCGGTGGTCTACGACCACGTCGGCCCGTTCGATGCGAACGTAAAAGACGAGATCGGGGACGACGAGAGTCGATCGACCGCCCCCGAGCAGCGAAAGCCGGCCGACGAGTCGAGGAAGCCGACTACGCTCTGGAGCGACGGAAAAGAATACGTGGAGTGCACTCTGTGCAACAAAAACGTCCCGGCCGCGTCCTGGCGCCGCCACCGGCGGTCCCACCAGGGCGGGCGGCCGCACAGCTGCCACGTGTGCGGGCTGGGGTTCGCCGACCGCGGCAACCTCGCGCGCCACGCGGCGGAGCGCCACCGCCGCCTGCGCCCGCACGCCTGCGCCCTCTGCGACCGGACGTTCGCGCGCAAGTCGCACCTGCGGGACCACGCGGCGTCGCACTCGACCGCGCGCGACCACGTGTGCGACGTGTGTGGCCGCGCCTCCAAGTCCGCCGCCGCGCTGCGCATGCACAAGAAGATGCACGATGACACGCTCGGGTTTCACTGCGCGTTCTGCGACGCTCGATTCAGGAGGAGGAGCCAGCTCGTGGCTCACGCGTCCGTGCACACCGGGGAGAGGGCCCACGCGTGCGCCTGCGGCCGGACTTTCCGTCTGCGCAGCCAGCTCAACGCGCACGCCCGCACGCACGACGACGGGCGACCGCGGGGAGACGAAACGGGCCCCGATCCGCGGGACGATGTCGCGAGGCCGATCGACCGGCCCGACCCCGCCGAGTCGGCGGCCCCCCCTCCGGTGCCCCCGCGGACCTGCACCTACTGCCGGGCGGAATGCCCCGAGCCCCAGCTCAAGGAGCACCTGATATCGACGCACTCGGAGCTGCTGTTCCGCTGCGACGAGTGCGACAGCTACGTCGACCGCCAGGACTTCGTCGAGCATATGTCGCAGCACGCCGTCGAGTACGCCGCCGACGCCGCGGGGGAGACTCGCCCCGAGGAGGCCCGCCCCACGCCCGACGTGCCCGGGGACCCCGGGGGACGTGGGGGCGACCGCACGGGAGACGGGGGCGCCTCGGAGAACGGGGACGACTTCTCGGACCACAGCGACGCGGAGTACTTCGGCGAGCTGCCCGACTCCGTGTTCGAGGCCATCGAGGACTCGCAGGACACGCAAGCGGCCGACGACGGCGACCGCCTCTCGCGGACCGACGCCGCGACCCCCGCCGTCTCCGCAGCGCCGCTCCCCCCCGTCGACGGGAGGAAAACGAAAAAGGAGCGGGCGTGCCCCGTCTGCTCGAAGGTGTACACCGCCAGCTCCAGCTACTTCTACCACCTGAAGCACGCGCACGGCGCCGACCGGCAGCACGAGTGCGACGTCTGCGGGAGGAGGTTCGGCGCCAAGCCGACGCTGGCGCAGCACCTGCTCATCCACGCGGCGGAGCGGCCGTACGCGTGCGCGCAGTGCGGCAAGACGTTCCGCGCGCGCGCCGCTCTCTACGTGCACGAGCAGACGCACGGCGGGCGCAGGACGCACGCGTGCGGGGAGTGCGGGCGCTCGTTCCGCTGGCGCGCGCACCTCGAGCGGCACCGGCGGCGGCACGAGAACGGGCGCGAGCACGCGTGCGACGCCTGCGGGCGGGCCTTCAGCGTGCGCGCCGACCTGCTGCGGCACGCGCGCACGCACGCAGCCGCGGCGCTGCCGTGCCCGCACTGCGAGCTGCAGTTCGCGCAGCCCCGCTACTTGCGCGCGCACCTCAACAACAAGCACGCCGCCGAGCTCGGAGGAGTCGTGAAATGA
- Protein Sequence
- MNIESEKMLVNSSANLSQESQSFEETCNVLNGLENLTNVCRTCANVTEFVIPIFVGEGLHNNLPQKIQQHLPIKISEDDVLPHVVCYQCASTILAWHDLVECCLQADVTLQQRISSLTNETELKINSNQRLEDNEDSSAKKGDDKLLSLVYDIIREYLQLMELDENNIMDLDYVCQVCAHKPAAKTIDNLVKHLQLSHSTELCNSESIQNFIRNNITFEESLSTEDQDDHWSDTDKGINKEAGTDLPAYFCPYCDSAFSTPTRLIHHINRHIDISTESVLTCCGESFNKKSFALHLQRRHVARVVAGPHVCRSCSHSARTEHDLQAHVAAEHRAQPAARPEPRRRRSHAPAICPRCRKTFSNKHNMLVHLRSHNASEPFACDRCDRRYRTRSGLSEHRRIVHEGVMRHVCAACGEAFPTRGARDVHARLHSGARPYACDYCGKAYRAKNTLDRHIEAHLDVRKCAPRPGLAAAPSETAGERVDHDDDDEPLASVAGRKAAELYGNFYGALVNFRDHLATEHEGSSPDSGDSDGGGSDEAVGDDYDDLTRGGARRGGPSAETDLELARAQTRVDGRAYYACGTCGKHLSSAQTYLFHRRIHTDERPCVCHVCGKQFRTPNGLRRHLAETHERRRFHACALCHRTFANSQNLRAHARIHTGEKPFVCAQCGKRFTQSGSLHAHARGHSALHPYRCAECGAQFKLRAGLARHALRHTGERPHACDACARAFRHRHELTAHALTHTDARPHACRLCGSAFRQRKALRHHCRRVHETDAADAPGPVVYDHVGPFDANVKDEIGDDESRSTAPEQRKPADESRKPTTLWSDGKEYVECTLCNKNVPAASWRRHRRSHQGGRPHSCHVCGLGFADRGNLARHAAERHRRLRPHACALCDRTFARKSHLRDHAASHSTARDHVCDVCGRASKSAAALRMHKKMHDDTLGFHCAFCDARFRRRSQLVAHASVHTGERAHACACGRTFRLRSQLNAHARTHDDGRPRGDETGPDPRDDVARPIDRPDPAESAAPPPVPPRTCTYCRAECPEPQLKEHLISTHSELLFRCDECDSYVDRQDFVEHMSQHAVEYAADAAGETRPEEARPTPDVPGDPGGRGGDRTGDGGASENGDDFSDHSDAEYFGELPDSVFEAIEDSQDTQAADDGDRLSRTDAATPAVSAAPLPPVDGRKTKKERACPVCSKVYTASSSYFYHLKHAHGADRQHECDVCGRRFGAKPTLAQHLLIHAAERPYACAQCGKTFRARAALYVHEQTHGGRRTHACGECGRSFRWRAHLERHRRRHENGREHACDACGRAFSVRADLLRHARTHAAAALPCPHCELQFAQPRYLRAHLNNKHAAELGGVVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01217675;
- 90% Identity
- iTF_00935010;
- 80% Identity
- -