Pruf002959.1
Basic Information
- Insect
- Pimpla rufipes
- Gene Symbol
- tfip11
- Assembly
- GCA_963932165.1
- Location
- OZ010631.1:5949218-5954661[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-100 3.6e-96 322.3 16.0 2 275 412 678 411 678 0.98 2 2 0.0037 41 3.9 0.1 243 273 691 721 683 723 0.88
Sequence Information
- Coding Sequence
- ATGTCGGAGGACGAGGTTGAGAGTTTTGAGATCACGGATTACGATCTGGACAATGAGTTCAACGTCAACAGGCCGCGCCGAAAGTTCACCAAGCAGCAGCAGATGCTTGGGATATGGGCTGACGACAGCGACGAGGAGCAACAGCCGCAGAGATCCAAACCCTTCGGCAAAGGTCCTAAGAATTATCAGGCGCCGGTGAGTTTTGTGGCCGGCGGAATCCAGCAAGCTGGAAAGCCCAAGGAGGAGCGAAAGAAGGATGAGGGTGAGGAGAAGGAgggggaggcggaggaggaggagggagacgaggacgatgacgacgatacTGGAAGGCCTAGAAGAGGCGACGATGATTTTGTACCCAATAGCTCCAGTGACTCGGAAGGCGAGGTAATCAGCAACACTCGCGCCAGGCCGTCGTTTTCCATGAACATGCAGGGCGACATAGCGGGACTGAGGCGAAAAGGCGCGCCGATGAATCCGGCGTTGCTAAAAACCGGCGTTGGTTCTTGGGAGATGCACACGAAGGGTATCGGAGCGAAGCTCTTGCTTCAGATGGGTTTCGAGCCCGGAAAGGGCTTGGGAAAGAATCTGCAAGGCATAAGCGCGCCGGTCGAGGCGCAGCTGAGAAAAGGCAGAGGCGCGATCGGCGCGTACGGCCCGGAAAAGCTGGCAAAAGTGccggagaagaagaaggacgaggacgaggaggaggcgaaggagTTCAAAGTGAAATTGTCGCAGTGGCGGAAAGGCGACGCGGTCGGCAGTAGCAACAAGAAAAAAGTGCGATATCACTATCGCAGCATCGATCAAGTGTTGGAGGATGGGAAAACGAAACCAATGAAGAAAGCCGGAGTGAGCAGCGTGATGAGCCGAGTAAAAGTGATCGACATGACCGGCCCGGAGCAGCGAGTCTTAAGCGGATATCACGCCATCGCCGGTGGTCAAAAACGACCCGACGAAAGTATCTCGATGACCGAGAAAAAGAGCTCCGGGAATTTCTCGTTGCCCGAGCTTCAGCACAATCTGAATCTCTTGGTGGATATGTGCGAGCAGGACATCATTCAGAACGACCGAAGAACGCGCAATTTGAACGATCGAGTTGTGGCGCTCGAGGCGGAGCGGAAAAACATCACGAAAGTCGTCGATCAGCACGAGCAACTGATCGACACGCTGCAGAACGTTGTGACGATTGTCGACAGATTATTGGAGAATAACGACGAAATGACGCTGAAAGACACCGCGGAGGGATTCAAGAAATTGCAAGACAAGTACTACGAGGAGTACAAACTTTATGAGCTCGGCGAACTCGCGAGCAGCTTCGTTGCCCCGAAAATCAAGGAGAGTCTCGCGAATTGGAATCCTCTGATGCAGCCGAAGCAACCGATGAGCCTGATAAAGGAGTGGAAGGATATTCTCGAGACGGGAACTGGGACACTGCAGTCGCGAAGCATGCATCCTTACGATCAACTCGTGTGGAACGCGTGGATGCCGTCGTTACGCGGGGCTGTGCAaGAATGGACTTGCAGGCAGCCCGAACCGTTGATCGAATTAATAGAGGATTGGATGCCCCTCCTACCGGCGTGGATATTGGAAAACATATTAGACCTTCTGATACTCCCGAAACTGACGCTCGAGGTCGAGGAATGGAATCCACTGACCGACACGGTGCCGATTCACACGTGGATTCATCCGTGGCTGCCGATAATGCGCAATCGAATGGACACCCTCATTTATCCGATAATTCGGCGCAAACTGGGCTCCGCCCTGGGCGGCTGGCATCCGTCCGACAGATCGGCGCGACTGATGCTTCAGCCGTGGGCTCAGGTCTTCACCAAGGGGGACATGGAGGCTTTCctcgtgaaaaatattctcCCGAAACTGCAGGTTGCGCTCTCCGAGTTCGTCATTAATCCTCATCAGCAGCACCTGGACCAGTGGAACTGGGTTTACGAATGGGCGACGGTGCTGCCGAATCACATTATGGTCGGCCTGTTGGACAAATTCTTCTTCCCAAAGTGGCTTCAGGTGTTGGCGCTGTGGCTGAATCACTCGCCGAATTACGATCAAATAACCAATTGGTACATGGGATGGAAGGGAATGCTCAACGACAAACTGTTGGCCGAACCCGTTGTCAAAGAGTACTTCAAAAAGGCGTTGGACATGATGAATCGAGCGGTGGCGACGCCTCATGCCCATCAACCAGGCGCTATGGAGCAAGTTTCGTACTTGACGAGTTTGGAACGAACGCAGCCGACGATGTCGCAAATACCGGCAACGGCGCAGCCGAGAATCGAGAGACTGGCAGAAGCCGTGCGCACCGCGTCCCAGATCCCCCAAGGCTTCAAGGATCTCGTGCAGAAGAAGTGCGAGGAACGAGGCATACTGTTTATGCCTATTCCAAACCGATACCGAGAAGCCAAACAGGTCTACAAAGTCGGCAACGTGCAGGCGTACATCGAGGGGAGCGTTCTCTTCGTTTGTCACAACAGCACCAACTGGGTACCGACGCATTTGAATGCTCTGCTCGACATGTCCGAGATGTGA
- Protein Sequence
- MSEDEVESFEITDYDLDNEFNVNRPRRKFTKQQQMLGIWADDSDEEQQPQRSKPFGKGPKNYQAPVSFVAGGIQQAGKPKEERKKDEGEEKEGEAEEEEGDEDDDDDTGRPRRGDDDFVPNSSSDSEGEVISNTRARPSFSMNMQGDIAGLRRKGAPMNPALLKTGVGSWEMHTKGIGAKLLLQMGFEPGKGLGKNLQGISAPVEAQLRKGRGAIGAYGPEKLAKVPEKKKDEDEEEAKEFKVKLSQWRKGDAVGSSNKKKVRYHYRSIDQVLEDGKTKPMKKAGVSSVMSRVKVIDMTGPEQRVLSGYHAIAGGQKRPDESISMTEKKSSGNFSLPELQHNLNLLVDMCEQDIIQNDRRTRNLNDRVVALEAERKNITKVVDQHEQLIDTLQNVVTIVDRLLENNDEMTLKDTAEGFKKLQDKYYEEYKLYELGELASSFVAPKIKESLANWNPLMQPKQPMSLIKEWKDILETGTGTLQSRSMHPYDQLVWNAWMPSLRGAVQEWTCRQPEPLIELIEDWMPLLPAWILENILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPIMRNRMDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAQVFTKGDMEAFLVKNILPKLQVALSEFVINPHQQHLDQWNWVYEWATVLPNHIMVGLLDKFFFPKWLQVLALWLNHSPNYDQITNWYMGWKGMLNDKLLAEPVVKEYFKKALDMMNRAVATPHAHQPGAMEQVSYLTSLERTQPTMSQIPATAQPRIERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIEGSVLFVCHNSTNWVPTHLNALLDMSEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01057641;
- 90% Identity
- iTF_00343177; iTF_01497414; iTF_00652713; iTF_00414300;
- 80% Identity
- -