Ccal042072.1
Basic Information
- Insect
- Cylloceria caligata
- Gene Symbol
- tfip11
- Assembly
- GCA_963942595.1
- Location
- OZ012710.1:1118561-1121461[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-97 9.1e-93 312.3 15.9 2 275 403 669 402 669 0.98 2 2 0.0055 1.4e+02 3.4 0.1 243 273 682 712 674 714 0.88
Sequence Information
- Coding Sequence
- ATGTCTGAAGATGAAGTGGAAAGGTTTGAAATAACGGATTACGATCTGGACAATGAATTCAATATTAATAGGCCACGCAGAAAGTTTACCAAGCAGCAGCAGATGCTTGGTATATGGGCGGATGATAGCGACGACGAGCATGCACCTCACATATCGAAAGGTTACGGTAAAAGTCCTAAGAATTATACAGCACCCGTAAGTTTTGTTGCCGGTGGAATCCAACAAGCGGGAAAACCTAAGGATGAACAAAAaaaagaggaggaagaagacgacgatgacgacaacgacACCGGAAGAGGCAAATCTCGAAGAGGCgacgatgtatttgttcttAATAGCTCCAGTGATTCCGAAGGCGAAGCGATCAGCAATGCTTGTGTCAGACCGTCGTTCACTATGAACATGCAAGGCGACATAGCAGGGATGAGAAAAAGAGGAGCGCCGATCAATCCGGCATTGCTAAAAACAGGTGTAGGCACTTGGGAGATGCACACAAAGGGTATCGGAGCAAAGCTCTTGCTTCAGATGGGTTTTGAGCCTGGTAAAGGCTTAggaaaaaatttgcaaggtataAGCGCACCGGTCGAGGCACAGCTGAGAAAGGGGAGAGGCGCTATCGGAGCTTATGGGCCAGAAAAGCTAGCAAAAGTACCAGCAAAGAAAAAGGACGAGGACGAGGCTGAAGCGAAAGAGTTCAAAGTTAAATTGTCACAGTGGCGAAAGGGCGATGGCGTTGGTAGTAGCAATAAGAAAAAAGTGAGATATCACTATCGTAGCATCGATCAAGTGTTGGAAGATGGCAAAACAAGACCAATGAAAAGAGCCGGCGTGAGCAGCGTAATGAGCAGAGTCAAGGTGATAGATATGACTGGACCGGAGCAGCGCGTTCTCAGCGGATATCACGCCATCGCCGGTGGTCAAAAACGACCTGACGAAACTATGGCGACGGTCGATCAAAAGACTTCCGGGAATTTCGCGTTGCCTGAACTTCAACACAATCTGAATTTGTTGGTAGACATGTGCGAGCAAGACATCATTCAGAATGACAGGAGAACGCGCAATTTGAATGACAGAGTGGTGGCTCTCGAGGCAGAGCGTAAAAATATAACAAAAGTCGTTGATCAGCATGAGCAATTGATCGACACGTTGCAGAACGTTATGTCGATTGTCGTTAGACTTTtggagaataacgacgaaatgACTCTCAAAGACACCGCGGAAGGCTTCAGGAAGTTACAAGACAGGTACTATGAGGAGTACAAGCTCTACGAGTTGGGTGAATTGGCAAGTAACTTCGTAGCACCAAAAATCAAAGAGAGCCTTGCCAATTGGAATCCGCTGATGCAACCGAAACAACCGATGACTCTGATAAAAGAGTGGAAAGATATTCTCGAGACGGGATCTGGCGCGTTACAATCGCGGAGCATGCAACCGTACGATCAGCTCATTTGGAATGCGTGGATGCCGTCGTTGCGTGGCGCTGTACAAGAATGGACTTGCAGGCAGCCCGAGTCATTGATCGAATTAATAGAAGATTGGATGCCCTTGCTTCCGGCATGGATTTTAGAAAATATATTGGATCTTTTGATACTTCCGAAGCTGACACTAGAAGTCGAGGAATGGAATCCTCTGACGGATACAGTACCAATTCATACCTGGATCCATCCGTGGTTGCCTATAATGCGTAATCGAATGGATACGCTTATTTATCCTATAATTCGCCGTAAACTGGGTTCCGCCTTGGGAGGCTGGCATCCATCCGATAGATCAGCCCGATTGATGCTGCAACCGTGGGCACAAGTATTCGCCAAGGGCGATATGGAGGCGTTCTTAGTCAAAAATATTCTTCCCAAGCTCCAGGTCGCTCTTTCCGAGTTTGTGATCAATCCCCATCAGCAGCACTTGGATCAGTGGAACTGGGTTTACGAATGGGTCACCGTACTGCCGATTCATATAATGGTCGGATTGTTGGATAAATTCTTTTTTTCAAAATGGCTTCAGGTATTGGCGCTCTGGTTGAATCATTCGCCAAATTATGATCAAATAACGAATTGGTACATGGGTTGGAAGGGTATGCTGAATGATAAACTGCTATCCGAACCGGTTGTGAAAGAGTACTTCAAAAAGGCATTAGATATGATGAATCGAGCGGTAACTACACCGCAGGTTCATCAACCAGGCGCGATGGAGCAAGTTTCGTATTTGACGAGTTTAGAACGAACTCAACCGATTATGTCGCAAATACCAATAACAGCACAGCCGAGGATCGAGAGACTGGCAGAAGCCGTGCGCACCGCGTCCCAAATCCCGCAAGGTTTCAAGGATCTTGTGCAGAAGAAATGCGAAGAACGAGGCATACTTTTTATGCCTATACCAAACCGATACCGCGAAGCTAAACAAGTCTACAAAGTCGGCAACGTGCAGGCGTACATTGAAGGAAACGTACTGTTCGTTTGTCACAACAGTACCAATTGGGTACCAACTCATTTAAATGCTCTGCTTGACATGTCCGAGATGTAA
- Protein Sequence
- MSEDEVERFEITDYDLDNEFNINRPRRKFTKQQQMLGIWADDSDDEHAPHISKGYGKSPKNYTAPVSFVAGGIQQAGKPKDEQKKEEEEDDDDDNDTGRGKSRRGDDVFVLNSSSDSEGEAISNACVRPSFTMNMQGDIAGMRKRGAPINPALLKTGVGTWEMHTKGIGAKLLLQMGFEPGKGLGKNLQGISAPVEAQLRKGRGAIGAYGPEKLAKVPAKKKDEDEAEAKEFKVKLSQWRKGDGVGSSNKKKVRYHYRSIDQVLEDGKTRPMKRAGVSSVMSRVKVIDMTGPEQRVLSGYHAIAGGQKRPDETMATVDQKTSGNFALPELQHNLNLLVDMCEQDIIQNDRRTRNLNDRVVALEAERKNITKVVDQHEQLIDTLQNVMSIVVRLLENNDEMTLKDTAEGFRKLQDRYYEEYKLYELGELASNFVAPKIKESLANWNPLMQPKQPMTLIKEWKDILETGSGALQSRSMQPYDQLIWNAWMPSLRGAVQEWTCRQPESLIELIEDWMPLLPAWILENILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPIMRNRMDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAQVFAKGDMEAFLVKNILPKLQVALSEFVINPHQQHLDQWNWVYEWVTVLPIHIMVGLLDKFFFSKWLQVLALWLNHSPNYDQITNWYMGWKGMLNDKLLSEPVVKEYFKKALDMMNRAVTTPQVHQPGAMEQVSYLTSLERTQPIMSQIPITAQPRIERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQVYKVGNVQAYIEGNVLFVCHNSTNWVPTHLNALLDMSEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01057641;
- 90% Identity
- iTF_01207355;
- 80% Identity
- -