Prap004529.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- ZBTB11
- Assembly
- GCA_905147795.1
- Location
- LR990606.1:2637079-2640476[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.085 6.6 7.6 0.7 3 23 53 72 52 72 0.95 2 27 0.00033 0.025 15.2 0.2 2 23 94 116 93 116 0.92 3 27 0.0023 0.18 12.5 0.6 2 21 131 150 130 151 0.92 4 27 0.016 1.2 9.9 3.8 1 23 185 208 185 208 0.91 5 27 0.0053 0.41 11.4 0.0 2 23 236 258 235 258 0.94 6 27 1.8 1.4e+02 3.4 0.1 2 23 280 302 279 302 0.94 7 27 9.6e-06 0.00075 20.0 0.6 1 23 307 330 307 330 0.97 8 27 0.74 57 4.6 1.0 2 23 336 358 335 358 0.90 9 27 0.0024 0.19 12.5 0.6 1 23 363 386 363 386 0.93 10 27 0.00061 0.047 14.3 5.3 1 23 390 413 390 413 0.97 11 27 0.00031 0.024 15.3 0.7 1 23 419 441 419 441 0.97 12 27 0.009 0.7 10.6 2.1 1 23 447 469 447 469 0.97 13 27 0.092 7.1 7.5 0.7 1 23 506 528 506 528 0.95 14 27 0.039 3 8.7 0.0 2 23 556 578 555 578 0.91 15 27 0.00021 0.016 15.8 1.2 2 23 599 621 598 621 0.96 16 27 0.0035 0.27 12.0 1.3 1 23 626 649 626 649 0.89 17 27 0.048 3.7 8.4 0.2 1 23 654 677 654 677 0.97 18 27 0.0018 0.14 12.9 0.5 3 23 681 702 680 702 0.92 19 27 5.4 4.2e+02 1.9 1.8 2 21 709 728 708 729 0.84 20 27 0.0063 0.49 11.1 1.1 1 23 781 804 781 804 0.95 21 27 3.8 3e+02 2.4 0.0 3 23 833 854 831 854 0.91 22 27 5.4e-05 0.0041 17.7 1.9 1 23 903 926 903 926 0.93 23 27 0.082 6.4 7.6 4.9 2 23 931 953 930 953 0.90 24 27 0.00051 0.039 14.6 0.6 1 23 958 981 958 981 0.97 25 27 1e-05 0.00078 19.9 4.7 1 23 985 1008 985 1008 0.97 26 27 9.9e-05 0.0076 16.8 1.2 2 23 1015 1036 1014 1036 0.96 27 27 0.00092 0.072 13.8 1.8 1 23 1042 1064 1042 1064 0.97
Sequence Information
- Coding Sequence
- ATGTGCTTGAATTTTCTACGGAAAATACTTATTTTATTTAATCAGCAAGTATCTGAAAAGAGAAATTTATTTTCAGATGCTACTGATCCGAGACGCCCGCACCTACTCACACTCATCAATAATACTAGCGTTATACCATTCAAGGGTCAAAATTCTTGTCTATTTTGCGATAAAACATTAGAATATGACGAATTAAATAAACATATAAAATCACACGGTCCCAATGTTATAATGAATACAAACATTCCCGATGAAGTTAAAGTTGATGTTTCTGTAACAGTTTGTGAGAAATGCAATATTGTTTTTGAAAATTTTGATAATCTCCGACAGCATTTGCTTGATGAGCATGCATTTGTTGATTTTAACTTAAAACCGGTAAAGTTGACTCTAAGTTGCGATAACTGTAAGAAAGTTTTCACGTCTAAGTTGGGGTTGAAGTATCATCTAAGTAGATGCAAAGATTCCTCCAATAGAACGAAAGTGATTAAACAAAATATAGCTATCCTCCTAAACATGTCCACGGCGCTTCCTTTCAAGTACTTTATGAATCGTTTCCGATGTTTTCACTGTTCCAAAGATTTCGTACAATTCGATTCACTGAAAGAGCATTCCGTCAAACAACATACGCACTGCGATTTGAAATCCAAATCTATGAAATTTCTTAAAGGACGCGATATTAGTTTGAAAATTGATATATCTAATTTGTCCTGCAAAGTATGTTCAGAAAAATACTCAGACGTATCAGCCCTAATTGATCACTTGATTGTTAATCATAAAGCGGCCTATGATACAACTGTAGAATATTTGCAATCCTTCAAAATTGCAAAGGATAGTATTCCATGTCCATTTTGCTCGGACGTTTTCCAGTATTTCAGAAAATTGCTGGAACATATTAACTTGTTACATTCTGTGGAGAATTTTGTTTGCGCGTACTGTGGTCAGACTTTTGGCAATAATTACAATTACCGCGCACACATATCGCGCTACCATAGACAAGAGAGTGTCAAATGTATAGAGTGCTCCACAGAGTTTGCCACCGTCCACAAACTATCCCGTCACAAAGCCAGAGTGCATGGTGAGAAAATTTATCAGTGCCAACAGTGTGATGATAAATTCGGGACGCAATATCTTCTTAAAAAGCACGCTATACAAGTGCACAGTTCTGGCCATAAATGCATGTACTGTAGCCGGATTTTTACAATAAATTCTCATTTGAGAAATCATGTGCGACGTCTGCACTTGAAGGAGAAGAATTTCGAGTGTAATATCTGTTCGGAGAGGTTTTTTGATAAGCCGCTATTAAAAACGCATCTAGTCAAACATATTGGTGAGAGAAATTATCATTGTGATATCTGTGGGAAGCGGTTTTTGTGGAAGAAGAATTTGAGAGGCCATATGTCTTCACACGATGAAAATCCGGAAGGCCTAGAGCCTTATACGTCTGAGAAGAGAAGGAAAAATTTGCAAATACTGTTCAACAACACAACGATAATACCGTTTAAATGGCGAGGCAAATATCTGTGTTTCTATTGTGCCAATGACTATACGGATTACTTAGATTTGAAGGAGCACATGAAATCCCACGGCCAATGCACAACAAGAGATTACTCGCTCAGAGCAATCAAAGGAAATAGTATAGAAATAAAACTGGACATATCAGCTATTGAATGCCTAATCTGCAGCGAACCTTTTACGAGTCGAAGCGAAATAGTCGATCACTTGATAGGAAAACACGATTTGGATTATGATAAAACAATTGAGACGCCAATCTCAGAATTTCGGTTGGTGGATATGAAGTGCCAGTATTGTGAAAAGGATTTCTCCTACTTCGTCTATTTGAGGAGGCATTTGAAGCTTGCACACTCGCATAATAGTTTTGTTTGCGACGACTGTGGGGCCACGTTTAATACTAAACGGGATTTGGCATTTCACCTCCACAATTTCCACAAATATGGAGGGTACCCGTGCGATGTATGCGCAGATGTTTTCGATTCCAAAAGCGCTTGGAAAAGTCACAAAAACAAAAATCATTTCAGAAAGTGCATATATTGTAATATTAGCTTTGCGTCTTTTTCGTTGTTACAAAAGCATATACAGAACGAACATTCCCAGTTTAAAAGTAACAAATGTCCATATTGTGCCAAAAAATGTCATTCTAAACAAGGTGTCGGTCTGCACATAAAAAACTGTAAGATGAATATGCTTCAAAAGACACCGGCTATGCTACCATCGGAGAACGCAATAGAGCCGAAGAAAAAGCAAAACTTAACCCAGATTAGACGGAATATCATAAACGTGCTAAACATGACATCGGTGGTTCCGTTTAAATTCTTTGGGAAGTTTTCCTGCTTCTATTGCTCGATACGGTTCACGGAGTTTGAGGATCTGAAACAGCATACGGCCTCCGAACATCCATTCTGCGATCTTGACACGCCCAGTATTAAGAAGTGTAAAGGCGAACGGACGACTGTCAAAATTGACATATCCTCTCTCGCGTGCAGGATTTGCAGCGAACCAGTTGAAGAATTCGACCAACTGATCGATCATATCATAGCTAAACACAGTGCGTCTTACGATAAATCGGTTCATAGTTTTGAGCCGTTTCGAATTTACATCGACAAATGCTCATGCACGCATTGTTCAAGTGTTTTTCGATATTTCACAACACTACTGCGACACTGCAACTCTGAGCATAGTGATACGTGTCATGTGTGTGATTCATGCGGGAGGAGTTTTAAAAAGGTGTCGAATTTAACGGCCCACATTGCGCATACGCATAAAGGCGCTTGCGAGTGTGCGATATGCGGTATTCAGTATAGGAATCAATGGTGTTTGAACCGGCACAACGCAAAATGCCACAATGCGAAGGATTTTAAGTGTCCCAACTGCCCGGAACAGTTTCAGTCGCCGTATCAGAGGCAGAAGCATCTGATAAAAGTCCATGATATAGGGCATAAGTGTAGTTACTGCGGTAGAATGTTTACGAGGAATTCGTTCATGCGGGATCATATCAGACGAACACATTTGAAGGAGAAAAATATGGAGTGTTCCATCTGTGGCGAGAAGTTTTTTGATAATCACCTATTGAAGCTTCATATGGTGAAACATGAGGGTGTTAGGAAGTTCAGTTGCGCTGTATGTTGTAAATCGTTTATGCGTCGTAGTAATTTGGCATCGCACATGGGCATGCATAAGAAATATGGGCATGTTAACGCTGAATGA
- Protein Sequence
- MCLNFLRKILILFNQQVSEKRNLFSDATDPRRPHLLTLINNTSVIPFKGQNSCLFCDKTLEYDELNKHIKSHGPNVIMNTNIPDEVKVDVSVTVCEKCNIVFENFDNLRQHLLDEHAFVDFNLKPVKLTLSCDNCKKVFTSKLGLKYHLSRCKDSSNRTKVIKQNIAILLNMSTALPFKYFMNRFRCFHCSKDFVQFDSLKEHSVKQHTHCDLKSKSMKFLKGRDISLKIDISNLSCKVCSEKYSDVSALIDHLIVNHKAAYDTTVEYLQSFKIAKDSIPCPFCSDVFQYFRKLLEHINLLHSVENFVCAYCGQTFGNNYNYRAHISRYHRQESVKCIECSTEFATVHKLSRHKARVHGEKIYQCQQCDDKFGTQYLLKKHAIQVHSSGHKCMYCSRIFTINSHLRNHVRRLHLKEKNFECNICSERFFDKPLLKTHLVKHIGERNYHCDICGKRFLWKKNLRGHMSSHDENPEGLEPYTSEKRRKNLQILFNNTTIIPFKWRGKYLCFYCANDYTDYLDLKEHMKSHGQCTTRDYSLRAIKGNSIEIKLDISAIECLICSEPFTSRSEIVDHLIGKHDLDYDKTIETPISEFRLVDMKCQYCEKDFSYFVYLRRHLKLAHSHNSFVCDDCGATFNTKRDLAFHLHNFHKYGGYPCDVCADVFDSKSAWKSHKNKNHFRKCIYCNISFASFSLLQKHIQNEHSQFKSNKCPYCAKKCHSKQGVGLHIKNCKMNMLQKTPAMLPSENAIEPKKKQNLTQIRRNIINVLNMTSVVPFKFFGKFSCFYCSIRFTEFEDLKQHTASEHPFCDLDTPSIKKCKGERTTVKIDISSLACRICSEPVEEFDQLIDHIIAKHSASYDKSVHSFEPFRIYIDKCSCTHCSSVFRYFTTLLRHCNSEHSDTCHVCDSCGRSFKKVSNLTAHIAHTHKGACECAICGIQYRNQWCLNRHNAKCHNAKDFKCPNCPEQFQSPYQRQKHLIKVHDIGHKCSYCGRMFTRNSFMRDHIRRTHLKEKNMECSICGEKFFDNHLLKLHMVKHEGVRKFSCAVCCKSFMRRSNLASHMGMHKKYGHVNAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01205897; iTF_01202644; iTF_01204260; iTF_01205112;
- 90% Identity
- iTF_01205897;
- 80% Identity
- -