Pmel026400.1
Basic Information
- Insect
- Pieris melete
- Gene Symbol
- ZBTB11
- Assembly
- GCA_963693345.1
- Location
- CAVNZK010000368.1:708090-711028[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0087 0.87 10.9 3.3 1 23 4 27 4 27 0.91 2 20 0.81 81 4.7 0.0 2 23 55 77 54 77 0.89 3 20 1.5 1.5e+02 3.9 0.1 2 23 99 121 98 121 0.94 4 20 7.7e-06 0.00077 20.5 0.6 1 23 126 149 126 149 0.97 5 20 0.64 64 5.0 0.9 2 23 155 177 154 177 0.90 6 20 0.0075 0.75 11.1 1.4 1 23 214 236 214 236 0.95 7 20 0.028 2.8 9.3 0.0 2 23 264 286 263 286 0.91 8 20 0.00016 0.016 16.3 1.2 2 23 307 329 306 329 0.96 9 20 0.0037 0.37 12.0 1.3 1 23 334 357 334 357 0.89 10 20 0.02 2 9.7 0.2 1 23 362 385 362 385 0.97 11 20 0.0097 0.97 10.7 0.5 3 23 389 410 388 410 0.91 12 20 7.9 7.9e+02 1.6 2.7 2 21 417 436 416 437 0.85 13 20 0.0011 0.11 13.7 1.2 1 23 489 512 489 512 0.95 14 20 2.3 2.3e+02 3.3 0.0 2 23 540 562 539 562 0.91 15 20 4.3e-05 0.0043 18.1 1.9 1 23 611 634 611 634 0.93 16 20 0.066 6.6 8.1 4.9 2 23 639 661 638 661 0.90 17 20 0.0004 0.04 15.1 0.6 1 23 666 689 666 689 0.97 18 20 8.1e-06 0.00081 20.4 4.7 1 23 693 716 693 716 0.97 19 20 7.9e-05 0.0079 17.3 1.2 2 23 723 744 722 744 0.96 20 20 0.00074 0.074 14.3 1.8 1 23 750 772 750 772 0.97
Sequence Information
- Coding Sequence
- atgaaTCGTTTTCGATGCTTTCACTGTTCTAAAGATTTCGTACAATTTGATTCACTCAAAGAACATTCTGTCAAAGAGCATCCGCATTGCGACTTGAAATCCAAATCTATGAAATTTCTAAAAGGACGTGATATTAGTTTGAAAATTGATGTATCTAATTTGTCCTGCAAAGTATGTTCAGAAAACTACTCAGATGTACCACCCCTAATTGATCACTTAATAGCTACACATAGAGCGACCTATGATAAAACTGTAGAATATTTGCAATCGTTTAAAATTGCAAAGGATAGTATACCATGTCCATTTTGCTCGGACGTGTTCCAGTATTTCAGAAAACTGCTGGAGcatattaatttgttacatTCTGTGGAGAATTTTGTTTGCGCTTACTGCGGTCAGACTTTCggcaataattataactacCGCGCACACATTTCGCGCTACCACAGACAAGATAGTGTCAAGTGTATAGAGTGCTCCACTGAGTTTCCTACCGTCCACAAACTATCCCGTCACAAAGCCAGAGTACATGatgaAAATCCGGAAGGCCTAGAGCCTTATACGTCTGAGAAGAGAAGGAAAAACTTGCAAATACTCTTCAACAACACAACGATTATACCGTTTAAATGGCGAGGGAAATATCTGTGTTTCTATTGTGCTAATGACTATACGGAATACTCAGATTTAAAGAAACACATGAAATCGCACGGCCTATGCACAACACGGGACTACTCGCTCAAAGCAATCAAAGGAAATAGTATAGAGATAAAACTAGATATATCGGCTATTGAATGCGAAATCTGCAACGAACCTTTTGGGAGTCGAAGTGAAATAGTCGATCACTTGATAGGAAAACACGATTTGGATTAcgataaaacaattgaaacgCCAATCTCAGAATTTCGGTTGGTGGATATGAAGTGCCAGTATTGTGAAAAGGATTTTTCGTACTTCGTCTATTTAAGGAGACATTTGAAGCTTGCACACTcgcaaaataattttgtttgcgACGACTGTGGAGCCACGTTCAATAGTAAACGGGATTTGGCATTTCACCTCCACAATTTCCACAAATATGGAGGGTACCCGTGCGACGTGTGCGCAGATGTCTTCGATTCCAAAAACGCTTTGAAAagtcacaaaaacaaaaatcatttcaGAAAGTGCATATATTGTAATGGTAGCTTCGCGTCCTTTTCGTTGTTACAGAAGCATATTCAGAACGATCATTCCcagtttaaaagtaataagtgTCCGTTTTGTTCGAAAAAATGTCATTCAAAGCAAGGTGTCGGGCTGCACataaaaaactgtaaaatGAATATCCTACAAAAGACTCCAGCTATGCTACCTTCTGAAAACGCTATAGAGCCGAAGAAAAAGCAAAATTTAACCCAAATTAGacgaaatataattaacgtattaaatatgacatcagtagtaccttttaaattCTTTGGCAAGTTTTCCTGCTTCTATTGCTCGTTACGGTTCACGGACTTTGAGGAACTCAAACAACATACGGCGTCCGGACATCCGTTTTGCGATTTAAACACGCCTAGTATTAAGAAATGTAAAGGCGAACGGACAACTGTCAAAATTGACATTTCCTCCCTCTCGTGTAGAATCTGCAGTCAACCAGCTGAACAATTCGAAGAACTGATCGATCATATTATAGCCAAACATAGTGCGTCCTACGATAAATCTGTTATTAGCTTTGAGCCGTTTCGAATATATATCGACAAATGCTCTTGCACGCATTGTTCCAGCGTTTTTCGATATTTCACAACTTTACTGCGGCACTGCAACTCTGAGCATAGCAATACGTGCCACGTGTGTGATTCTTGCGGGAGGAGTTTTAAAAAGGTATCAAATTTGACAGCGCACATTGCGCATACGCATAAGGGTGCTTGCGAGTGTGCTATATGCGGTATTCAGTATAGGAACCAGTGGTGTTTGAACCGGCATAACGCTAAATGCCACAATGCGAAGGATTTTAAGTGTCCCAACTGCCCTGAGCAGTTTCAGTCGCCGTATCAAAGACAAAAGCATCTGATAAAAGTTCATGATATAGGACATAAGTGTAGCTACTGTGGTAGAATGTTTACGAGGAATTCGTTCATGAGGGATCACATTAGACGGACCCATTTGAAGGAGAAAAATATGGAATGCTCAATTTGTGGGGAgaaattttttgataatcaTCTGTTGAAGCTTCATATGGTGAAACATGAAGGTGTTAGGAAGTTCAGTTGCGCTGTATGTTGTAAATCGTTTATGCGACGGAGTAATTTGGCATCGCACATGGGTATGCACAAGAAATATGGGCATGTTAACGCTGAATAG
- Protein Sequence
- MNRFRCFHCSKDFVQFDSLKEHSVKEHPHCDLKSKSMKFLKGRDISLKIDVSNLSCKVCSENYSDVPPLIDHLIATHRATYDKTVEYLQSFKIAKDSIPCPFCSDVFQYFRKLLEHINLLHSVENFVCAYCGQTFGNNYNYRAHISRYHRQDSVKCIECSTEFPTVHKLSRHKARVHDENPEGLEPYTSEKRRKNLQILFNNTTIIPFKWRGKYLCFYCANDYTEYSDLKKHMKSHGLCTTRDYSLKAIKGNSIEIKLDISAIECEICNEPFGSRSEIVDHLIGKHDLDYDKTIETPISEFRLVDMKCQYCEKDFSYFVYLRRHLKLAHSQNNFVCDDCGATFNSKRDLAFHLHNFHKYGGYPCDVCADVFDSKNALKSHKNKNHFRKCIYCNGSFASFSLLQKHIQNDHSQFKSNKCPFCSKKCHSKQGVGLHIKNCKMNILQKTPAMLPSENAIEPKKKQNLTQIRRNIINVLNMTSVVPFKFFGKFSCFYCSLRFTDFEELKQHTASGHPFCDLNTPSIKKCKGERTTVKIDISSLSCRICSQPAEQFEELIDHIIAKHSASYDKSVISFEPFRIYIDKCSCTHCSSVFRYFTTLLRHCNSEHSNTCHVCDSCGRSFKKVSNLTAHIAHTHKGACECAICGIQYRNQWCLNRHNAKCHNAKDFKCPNCPEQFQSPYQRQKHLIKVHDIGHKCSYCGRMFTRNSFMRDHIRRTHLKEKNMECSICGEKFFDNHLLKLHMVKHEGVRKFSCAVCCKSFMRRSNLASHMGMHKKYGHVNAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206746;
- 90% Identity
- iTF_01204260; iTF_01202644;
- 80% Identity
- -