Pman020978.1
Basic Information
- Insect
- Pieris mannii
- Gene Symbol
- ZBTB11
- Assembly
- GCA_029001895.1
- Location
- CM054850.1:4069621-4072568[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0096 0.81 10.9 3.3 1 23 14 37 14 37 0.91 2 20 0.081 6.9 7.9 0.0 2 23 65 87 64 87 0.91 3 20 1.6 1.4e+02 3.9 0.1 2 23 109 131 108 131 0.94 4 20 8.5e-06 0.00072 20.5 0.6 1 23 136 159 136 159 0.97 5 20 2.6 2.2e+02 3.2 0.6 2 23 165 187 164 187 0.89 6 20 0.0014 0.12 13.5 1.5 1 23 224 246 224 246 0.96 7 20 0.013 1.1 10.5 0.0 2 23 274 296 273 296 0.91 8 20 0.00018 0.015 16.3 1.2 2 23 317 339 316 339 0.96 9 20 0.0028 0.24 12.5 1.2 1 23 344 367 344 367 0.89 10 20 0.042 3.5 8.8 0.2 1 23 372 395 372 395 0.97 11 20 0.012 1 10.6 2.1 3 23 399 420 398 420 0.93 12 20 1.1 91 4.4 2.1 2 21 427 446 426 447 0.85 13 20 0.0091 0.77 10.9 1.1 1 23 499 522 499 522 0.95 14 20 1.6 1.4e+02 3.9 0.0 2 23 550 572 549 572 0.91 15 20 4.7e-05 0.004 18.1 1.9 1 23 621 644 621 644 0.93 16 20 0.072 6.1 8.1 4.9 2 23 649 671 648 671 0.90 17 20 0.00044 0.038 15.1 0.6 1 23 676 699 676 699 0.97 18 20 8.9e-06 0.00075 20.4 4.7 1 23 703 726 703 726 0.97 19 20 8.7e-05 0.0073 17.3 1.2 2 23 733 754 732 754 0.96 20 20 0.00081 0.069 14.2 1.8 1 23 760 782 760 782 0.97
Sequence Information
- Coding Sequence
- ATGTCCACGGCGCTTCCTTTCAAGTACTTTATGAATCGTTTTCGATGCTTTCACTGTTCTAAAGATTTCGTACAATTTGATTCACTGAAAGAGCATTCCGTCAAAGAGCATACGCATTGCGACTTGAAATCCAAATCTATGAAATTTCTTAAAGGACGCGatattagtttgaaaattgaTATATCTAATTTGTCCTGCAAAGTATGTTCAGAAAAATACTCAGACGTACCAACCCTTATTGATCACTTGATTGCTAATCATAAAGCGGCCTATGATACAACTGTAGAATATTTGCAATCCTTCAAAATTGCAAAGGATAGTATTCCATGTCCATTTTGCTCGGATGTATTCCAGTATTTCAGAAAATTGCTGGAACATATTAACTTGTTACATTCTGTGGAGAATTTCGTTTGCGCGTACTGTGGGCAGACTTTCGGAAATAATTACAACTACCGCGCTCACATATCGCGGTACCATAGACAAGATAGTGTCAAATGTATAGAGTGCGCCACAGAGTTTCCTACCGTCCACAAACTATCCCGTCACAAAGCCAGAGTGCATGATGAAAATCCAGAAGGCCTAGAGCCTTATACGTCTGAGAAGAGAAGGAAAAACTTGCAAATACTGTTCAACAACACAACGATTATACCGTTTAAATGGCGAGGCAAATATCTGTGTTTCTATTGTGCCAATGACTATACGGATTACTCAGATTTGAAGAAGCACATGAAATCGCACGGCCAATGCACAACACGGGATTACTCGCTCAGAGCAATCAAAGGAAATAGCATAGAAATTAAACTAGATATATCGGCTATTGAATGCGTAATCTGCAACGAACCTTTTACGAGTCGAAGTGAAATAGTCGACCACTTGATAGGGAAACACGATTTGGATTACGATAAAACAATTGAGACGCCAATCTCAGAATTTCGGCTGGTGGATATGAAGTGCCAGTATTGTGAAAAGGATTTCTCCTACTTCGTCTATTTACGGAGGCACTTGAAGCTTGCACACTCCCAAAATAGTTTCGTTTGCGACGACTGTGGGGCTACGTTTAATACTAAAAGGGATTTGGCATTTCACCTCCACAATTACCACAAATATGGAGGGTACCCGTGCGACGTGTGCGCGGATGTGTTCGATTCCAAAAGCGCTTGGAAAAGTCACAAAAACAAGAATCATTTCAGAAAGTGCATATATTGCAATAGTAGCTTCGCTTCTTTTTCGTTATTACAAAAGCATATCCACACCGATCATTCCCAGTTTAAAAGTGATAAATGTCCATATTGTTCCAAAAAATGTCATTCAAAACAAGGTGTCGGGCTGCACATAAAAAACTGTAAAATGAATATTCTTCAAAAGACACCTGCTATGCTACCTTCGGAGAACGCAATAGAGCCGAAGAAAAAGCAAAACTTAACCCAAATTAGACGGAATATCATTAACGTGTTAAATATGACATCGGTGGTTCCGTTTAAATTCTTTGGGAAATTTTCCTGCTTCTATTGCTCGGTACGGTTCACGGAGTTTGAGGATCTCAAACAGCATACGGCGTCCGAACATCCATTCTGTGATTTGGACACGCCCAGTATTAAGAAGTGTAAAGGCGAACGGACGACTGTCAAAATTGACATATCCTCTCTCTCGTGCAGAATTTGCAGTGAACCAGCTGAACAATTCGACGAACTGATCGATCATATTATAGCTAAACACAGTGCGTCCTACGATAAATCCGTTCTTAGTTTTGAGCCGTTTCGTATTTACACCGACAAATGCTCTTGCACGCATTGTGCCAGTGTTTTTCGATATTTCACAACACTACTGCGACACTGCAATTCCGAGCATAGTAATACGTGTCACGTGTGTGATTCATGCGGCAGGAGTTTTAAAAAGGTATCGAATTTAACGGCGCACATTGCGCATACGCACAAAGGCGCTTGCGAGTGTGCGATATGCGGTATTCAGTATAGGAACCAGTGGTGTTTGAACCGGCACAACGCTAAATGCCACAATGCGAAGGATTTTAAGTGTCCCAACTGCCCTGAGCAGTTTCAGTCGCCGTATCAGAGGCAAAAGCATCTGATAAAGGTTCATGATATCGGGCATAAGTGTAGCTACTGTGGACGAATGTTTACGAGGAATTCGTTCATGCGAGATCATATCAGACGAACCCATTTGAAAGAGAAAAATATGGAATGTTCTATCTGTGGGGAGAAATTTTTTGATAATCACCTGTTGAAGCTTCATATGGTGAAACATGAGGGTGTGAGGAAGTTCAGTTGCGCTGTGTGTTGTAAATCGTTCATGCGTCGTAGTAATTTGGCATCGCACATGGGTATGCATAAGAAATATGGGCATGTGAACGCTGAATAA
- Protein Sequence
- MSTALPFKYFMNRFRCFHCSKDFVQFDSLKEHSVKEHTHCDLKSKSMKFLKGRDISLKIDISNLSCKVCSEKYSDVPTLIDHLIANHKAAYDTTVEYLQSFKIAKDSIPCPFCSDVFQYFRKLLEHINLLHSVENFVCAYCGQTFGNNYNYRAHISRYHRQDSVKCIECATEFPTVHKLSRHKARVHDENPEGLEPYTSEKRRKNLQILFNNTTIIPFKWRGKYLCFYCANDYTDYSDLKKHMKSHGQCTTRDYSLRAIKGNSIEIKLDISAIECVICNEPFTSRSEIVDHLIGKHDLDYDKTIETPISEFRLVDMKCQYCEKDFSYFVYLRRHLKLAHSQNSFVCDDCGATFNTKRDLAFHLHNYHKYGGYPCDVCADVFDSKSAWKSHKNKNHFRKCIYCNSSFASFSLLQKHIHTDHSQFKSDKCPYCSKKCHSKQGVGLHIKNCKMNILQKTPAMLPSENAIEPKKKQNLTQIRRNIINVLNMTSVVPFKFFGKFSCFYCSVRFTEFEDLKQHTASEHPFCDLDTPSIKKCKGERTTVKIDISSLSCRICSEPAEQFDELIDHIIAKHSASYDKSVLSFEPFRIYTDKCSCTHCASVFRYFTTLLRHCNSEHSNTCHVCDSCGRSFKKVSNLTAHIAHTHKGACECAICGIQYRNQWCLNRHNAKCHNAKDFKCPNCPEQFQSPYQRQKHLIKVHDIGHKCSYCGRMFTRNSFMRDHIRRTHLKEKNMECSICGEKFFDNHLLKLHMVKHEGVRKFSCAVCCKSFMRRSNLASHMGMHKKYGHVNAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206746;
- 90% Identity
- iTF_01205112;
- 80% Identity
- -