Pgno009493.1
Basic Information
- Insect
- Pheosia gnoma
- Gene Symbol
- lrrfip2
- Assembly
- GCA_905404115.1
- Location
- FR989897.1:1047647-1057822[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.23 4.3e+03 -3.3 0.1 68 277 84 106 62 110 0.48 2 3 1e-77 1.9e-73 247.4 23.2 1 271 128 400 128 418 0.89 3 3 1 1.8e+04 -7.2 17.5 1 48 419 465 419 495 0.71
Sequence Information
- Coding Sequence
- ATGGTGCATCGTTCCGAGATGGCCACGCCTGACAATAGTGACGAGGAGAGCGGTGAAGCCTTCACCGACGGAGATTTCGGTGACTCCGATGATGAAACCGTCGTGGAGCGTGGTGAGGAAGCCAAACCCTCGCATATTCCTCTCAACGAAACCGTAAACGAAGGATTGCAGAAAACAAATGTAGAAACTAATGGTCATCCTCCAAGTAATGGTATAGATGAAAAACTAAATGAGAAGCCTAAACTTAATGGACGTAAAAATTGTGAGGAGCAGTCGAGTGACGTGGAGAACCAAAGCCTTGTAATATCGGATTTACGGAGAGACTCTCATGGGGATCAAAATCCTTCCATAGTCGGCATTCTCGGTGATCAACAGAACCATGCGGAGCAGCGACTAGCGGCGCGGCGCGCGGCTCGAGCGGAGGCCCGCGAGATACGCATGCGCGAGCTGGAGAGGCAGCAGCGGGAGCAGGAGGACCATGCCGACAAGGCATACGACATGTACGCAGAGACGGTGGGTCGTCGCGCGGGCACGCGACTGACGGCGCTGGCCCCGACCAGCGTGCTCTCGCCGCGCCGCAGCTCCGAGGACTCCGCCGATGACACCTTCAGCGTCAAGGAGCTTAGGCACGAGCTGAAGGAGGTCGAGGAGAAGTTCCGCAAGGCGATGATCCTAAACGCGCAGCTGGACAACGATAAGGCGGCTCTCGGATACCAGCTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTATGTCCAACTGCAGCGAGAACACCGAGAGAAATGCTCATCGCACGAGCGTTTAAAACGCGAGCACGAATCCGTGTCGCGCGAGCTGAGCGCGGCGCGCGACGCGGTGCGCGCGCGCGACGCGGCCGCCGCCGCCGCCGGCTTCGCGTTCGTGGACGCCGCCGAGCTGCCCGCGCCCGCCGCCCCCGCCGCCCCCGCCGCACCCGCCGCACCCGCCGCCCACGGACAAATGCCATCCCTCGCGCTCGTCTCGCACTCCGCGGAGAAACTGCTCAACGACGCCGGCGAGGGCACACTAGATGTCCGGTTGCAGAAGCTGCTCAGCTCGAAGCAAGCGCTGGAGTCCGAGGTGCGTAAGCTGAAGCTACAGCTGAACGAGGAGCGCGCCGCGCGACAGAACGGCGTCGCCAACCACCACGACGACGAGTACGAGAACGAAATGGAGGCGCTGCGCAAGGCGGCGGGCGAGGCGAAGGCGCGGGCGGCGCGTGCCGAGGCAGAGGCGGCGCTGCAGGGCGCGCAGGCGGCGCGACTCGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCCGCCTGCAGAGAGAGGCTCGCGAGGCCCTCAACCGAGTGGAGGAGTTGGAAACCGAGAACAGTCACCTGACGAAGCGCCTCGACAAGCTGAAGAACGCCAAATCCGCACTCCTAAAGGACCTGTGA
- Protein Sequence
- MVHRSEMATPDNSDEESGEAFTDGDFGDSDDETVVERGEEAKPSHIPLNETVNEGLQKTNVETNGHPPSNGIDEKLNEKPKLNGRKNCEEQSSDVENQSLVISDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGTRLTALAPTSVLSPRRSSEDSADDTFSVKELRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYVQLQREHREKCSSHERLKREHESVSRELSAARDAVRARDAAAAAAGFAFVDAAELPAPAAPAAPAAPAAPAAHGQMPSLALVSHSAEKLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVANHHDDEYENEMEALRKAAGEAKARAARAEAEAALQGAQAARLEAQLARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_01180330;
- 80% Identity
- -