Pari027396.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- -
- Assembly
- GCA_963565745.1
- Location
- OY751444.1:8010814-8011664[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-11 9.9e-09 36.0 0.0 1 44 17 60 17 61 0.93 2 2 6.6 1.4e+03 0.3 0.1 13 23 138 149 131 151 0.68
Sequence Information
- Coding Sequence
- atgCCGAGAAAATACGTGAGGAAACATACGGTAGTCAGGGGGCAGTGGAGTGAAGAGAATTTAATTTTGGCtattgaaaaagtaaaaaaaggagaaatatcaaaaaatgaaGCTCAAAAAGTTTATGGAATACCGATTCGTACCTTGAGTAGGCGTCTCATGACTGGTAATACTAAGAAGTCTGGATTAGGTCCTTCAGCATCACTTGGGACAGAGAATGAAAAACGATTGGCTTCTTATATTAAGCGCCTAGCTAACGCTGGTTTTGCTCCTGATAGGACTACTATTCGGTCTTTTGCTTATCAATTTGCCGAAAAGCTTGGAATCAAGCATAAATTTTCTAAAGAAAAAGAGAAGGCAGGTCAACATTGGCTCTCTTCTTTTCTAGAAAGAAATAAAGATATTTCAGTACGTCAAGCAGAAGGTCTATCTGTTGCAAGAGCCCAGGGAATGAACCGAGAAGAAGTAAATGCTTTTTTTAAACTGCTTGAAGAAGAAATGGTAAAGTACGATTTAACTAATAgacctgaaaatatttttaatgttgacGAGAGTGGAATTCAACTAATAAATAAACCTGGAAAAGTATTAGCAGCCAAAGGAGCAAAGGACATTCATGTAATTACACCTCGTGAAAAAGGAGAAACAATTTCTCTGGTTGCATGTTGCAGTGCTGAAGGCCGTTTTCTACCTCCAGTGTTAATAATGAAAGGAGTCAATAAAAAGGCAGAGTTTTCTGATGGCTTGCCAAATGGGTAG
- Protein Sequence
- MPRKYVRKHTVVRGQWSEENLILAIEKVKKGEISKNEAQKVYGIPIRTLSRRLMTGNTKKSGLGPSASLGTENEKRLASYIKRLANAGFAPDRTTIRSFAYQFAEKLGIKHKFSKEKEKAGQHWLSSFLERNKDISVRQAEGLSVARAQGMNREEVNAFFKLLEEEMVKYDLTNRPENIFNVDESGIQLINKPGKVLAAKGAKDIHVITPREKGETISLVACCSAEGRFLPPVLIMKGVNKKAEFSDGLPNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00444011; iTF_01302225; iTF_00443992; iTF_00065228; iTF_00065209; iTF_00065247; iTF_01016525; iTF_00443903;
- 90% Identity
- iTF_01302225;
- 80% Identity
- -