Mlae032080.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- Pogk
- Assembly
- GCA_947458855.1
- Location
- OX375846.1:3619521-3622670[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-13 1.7e-10 41.6 0.0 1 44 44 87 44 88 0.95 2 2 6.5 2.1e+03 -0.4 0.0 13 23 165 176 158 177 0.65
Sequence Information
- Coding Sequence
- ATGGTAATCTGGCTCTTTTACTTTGACTATGGGGAGGAGGAGGTCCTAGTGGGGAACGACGGCTCCCTGCGTACCGGCAGaatgccgagaaaatacgtaaggaagcatacagtagtcagaggacagtggactgaagaaaatttaattttggcaattgaaaaagtacaaaaaggggaaatatcgaaaaatgAAGCTCAAAGACGTTATGGAATACCGATTCGAACCTTGAGTAGGCACCTTATGACTGGCAACACTACAAAGTCGGGATTAGGACCTCAAGCTTCACTTGGAACAGAGAATGAAAAACGATTGGCTTCTTATATTAAACGCCTAGCTAACGCTGGTTTTGCACCTGATAGGTCTACTATTCGGTCTCTTGCCTATCAATTTGCCGAGAAACTTGGAATTCAACATAAATTTTCGAAAGAAAAGGAAAAGGCAGGGCAACATTGGCTAACTTCTTTTCTAGAGAGAAATAAAGATATTTCAGTACGGCAAGCAGAAGGTCTCTCTGTTGCAAGAGCTCAGGGTATGAATAGAGAAGAAGTTAGTGCATTCTTTAAGCTACTTGAAGAAGAAATGGTCAAACATGAGTTAACTAATAGGCATGAAAATATTTTTAATGTTGACGAGACTGGAATACAGTTAATAAATAAACCTGGAAAGGTATTAACAGCCAAAGGAGCTAAGGACGTTCACGTGATCACACCTCGTGAAAAAGGAGAAACAATTTCTCTCGTTGCATGCTGCAGTGCTGAAGGCCGTTTTCTACCTCCAGTGTTAATAATGAAAGGCGTCAATAAAAAATCTGAATTTTCTGATGGCTTGCCTAATGGGTCCGATGTCTACATGAATAAAAAcaccgcagatgcatctatgtggttgacaTCTTATATTAATTCTGAACTATTTTTGCGGTGGTTTAAGGAACATTTTCTACCCAAAAAACCAAAGACAGGTAAAACAATTTTAATTTTAGATGGTCACACCTCACATTCTAATTCAATAGACCTGTTAGACCTAGCCAATGAAAATGATGTCATAATTATATGCTTGCCGAGTCACACAACACAAGCCCTTCAACCTCTAGATCGCAGTTTCTTCAAACCTATTATAACCAGGAATCCAATGCATGGATGTTAA
- Protein Sequence
- MVIWLFYFDYGEEEVLVGNDGSLRTGRMPRKYVRKHTVVRGQWTEENLILAIEKVQKGEISKNEAQRRYGIPIRTLSRHLMTGNTTKSGLGPQASLGTENEKRLASYIKRLANAGFAPDRSTIRSLAYQFAEKLGIQHKFSKEKEKAGQHWLTSFLERNKDISVRQAEGLSVARAQGMNREEVSAFFKLLEEEMVKHELTNRHENIFNVDETGIQLINKPGKVLTAKGAKDVHVITPREKGETISLVACCSAEGRFLPPVLIMKGVNKKSEFSDGLPNGSDVYMNKNTADASMWLTSYINSELFLRWFKEHFLPKKPKTGKTILILDGHTSHSNSIDLLDLANENDVIIICLPSHTTQALQPLDRSFFKPIITRNPMHGC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178353;
- 90% Identity
- -
- 80% Identity
- -