Asol084635.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720678.1:141213248-141214024[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-11 8.8e-10 41.3 0.0 1 44 17 60 17 61 0.96
Sequence Information
- Coding Sequence
- ATGCCAAGAAAATATGTAAGAACTCATAAAGTGGTCAGAGGGCAGTGGACAGAAGAATCACTAATTTTAGCCATAGAAAAAGTAAAAAAAGGTGAAATATCGAAAAATGAGGCCCAAAGACGATATGGGATACCAATTCGTACCTTATCTAGGCGCCTTAAGACCGGTAACACTACTAAATCTGGATTAGGTCCTCAAGCATCACTCGGACAAGAAAACGAAAAACGATTAGCGTCTTATGTTAAACGCTTAGCTAATGCTGGTTTCGCACCAGACCGGAGTATAATTCGTTCTCTGGCCTATCAATTTGCCGAGAAACTtggaataaaacacaaattttccaagaaaaaagaaaaggcAGGGCAACATTGGCTTACATCTTTCTTAGAGAGAAATAAAGATATCTCAGTACGTCAAGCAGAAGGTCTCTCTGTTGCAAGAGCTCAGGGTATGAACAGGGAAGAAGTAAGTGCATTTTTCAGACTGCTTGAGGAAGAAATGATAAGAAATGATTTGACTAATAAACCAGAAAATATTTTCAACGTTGATGAGAGTGGCatacaattaataaataaaccTGGAAAAGTGTTGACGGCAAAAGGAGCTAAAGATGTTCATCTGATCACGCCCCATGAGAAGGGAGAAACTATTACTTTGATTGCATGCTGTAGTGCTTAA
- Protein Sequence
- MPRKYVRTHKVVRGQWTEESLILAIEKVKKGEISKNEAQRRYGIPIRTLSRRLKTGNTTKSGLGPQASLGQENEKRLASYVKRLANAGFAPDRSIIRSLAYQFAEKLGIKHKFSKKKEKAGQHWLTSFLERNKDISVRQAEGLSVARAQGMNREEVSAFFRLLEEEMIRNDLTNKPENIFNVDESGIQLINKPGKVLTAKGAKDVHLITPHEKGETITLIACCSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178353;
- 90% Identity
- iTF_00065209;
- 80% Identity
- -