Pnig023246.1
Basic Information
- Insect
- Pentalonia nigronervosa
- Gene Symbol
- dmd-4
- Assembly
- GCA_014851325.1
- Location
- scaffold:63484-67199[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-26 6.6e-22 77.7 11.5 1 47 37 83 37 83 0.99 2 2 0.34 3e+03 -1.2 0.9 30 36 295 301 289 306 0.56
Sequence Information
- Coding Sequence
- ATGACAAACTGGCTCCGCCCCATAAAATCCCACATCAATCTGCTACCGTACCGCGAGGTCATCGACGATCATCATTCTGCTGACAGCAATATGGACAGCTCCGAGGGAAGACGACCAAAGTGTGCGCGATGCAGGAACCACGGCGTTATATCGTGGTTGAAGGGTCACAAAAAACGGTGCTCTTACAAAGAATGCGTGTGCCCGAAGTGCAATCTTATAGCTGAAAGGCAACGGGTCATGGCTGCTCAAGTTGCATTAAAAAGACAACAAGCGGCCGAGGATGCTATAGCATTGGGATTGGCTTCGGTTACTTCCGGAACTAAATATGGATGCTTACCACAAGGTCCCATATTTGGCATGACTGTTCCCACATCCAAGTCTCCTGTTGCAAAGGAAGAAACTACTCGATCCGAAGAAAACTCAACAGCGACTTTACAATTATCAGATGGTGCCAAAGGAGTTGTACCACCAGGTTCTCTTGATTTGCTTTGTCGGTTATTTCCAGAGAAAAAACGATCGGTTCTGGAGCTGGTACTTCGTCGATGTGAACATGATTTATTGAAAGCTATAGAGCATTGTGTACCTTTATGCAAGTCTTTAGCAGCCACCCCGAAATCTCGGAAGATCAGCACGGATAAAGTTGAAATACCTCAGACTTCTACTATTGGTTCTGCATTTATGCCTTGGGGTTTACACCGTGAACCACCAGTAGCTCATCAAAACGCTCGGAGGCAGTTGGCCACTAGATTGACTTACCATGTACCAGAACCGACCACTACGTTGTTTCATCACTTTAGGACCCAATCTACCGGCGTTTCGTGTGGACCGCCTTTTTATTTGCCGCCGTTTTTGCTAGAATCAGCTGAATCATGTCATGTAGCCAACTGCGCCGAATGTGCATCAGCTGCAGCTCAACAGATATGA
- Protein Sequence
- MTNWLRPIKSHINLLPYREVIDDHHSADSNMDSSEGRRPKCARCRNHGVISWLKGHKKRCSYKECVCPKCNLIAERQRVMAAQVALKRQQAAEDAIALGLASVTSGTKYGCLPQGPIFGMTVPTSKSPVAKEETTRSEENSTATLQLSDGAKGVVPPGSLDLLCRLFPEKKRSVLELVLRRCEHDLLKAIEHCVPLCKSLAATPKSRKISTDKVEIPQTSTIGSAFMPWGLHREPPVAHQNARRQLATRLTYHVPEPTTTLFHHFRTQSTGVSCGPPFYLPPFLLESAESCHVANCAECASAAAQQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01346469; iTF_00973064; iTF_01305576; iTF_00019054; iTF_01032910; iTF_00135343; iTF_01328655; iTF_01304880; iTF_01330576; iTF_00136145; iTF_00940530; iTF_01304211; iTF_00134292; iTF_01037817; iTF_01031994; iTF_00463361; iTF_01499665; iTF_01347122; iTF_01433138; iTF_01169877; iTF_00308859; iTF_00468956; iTF_00340606;
- 90% Identity
- iTF_00468956;
- 80% Identity
- -