Smay004986.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- dmd-4
- Assembly
- GCA_034509805.1
- Location
- JASXSY010000311.1:22652-25992[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-26 8.7e-22 77.9 10.9 1 47 7 53 7 53 0.99 2 2 0.39 4.2e+03 -1.1 0.9 30 36 264 270 258 275 0.56
Sequence Information
- Coding Sequence
- ATGGACAGCTCCGAGGGAAGACGACCGAAGTGTGCACGATGTAGGAACCACGGAGTAATATCGTGGTTGAAGGGCCACAAAAAACGGTGTTCTTTTAAAGAATGCGTGTGTCCCAAGTGCAATCTCATAGCCGAAAGACAACGTGTAATGGCTGCTCAGgtcGCGTTAAAAAGACAACAAGCTGCTGAAGATGCTATAGCGTTGGGATTAGCTTCTGTTACTTCTGGAACTAAATACGGATGTTTACCACAGGGCCCCATATTCGGAATGACTGTTCCAACCTCTAAATCTCCCGTTGCTGTGGAAGAAACTACCCGGCCTGAAGAAAATCCAACAGCTACTTCTCAGACGTCGGATGGATCCAAAGGAGTGGTACCACAGGGCTCTCTTGATTTGTTGTGTCGGTTGTTTCCGGAAAAAAAACGTTCGGTCTTGGAGCTTGTACTGCGTCGTTGTGAACATGATTTGCTCAAGGCGATTGAACATTGTGTACCATTATGTAAGACTTTGACCACCGCTCCCAAGTCTCGGAAATCCAGcacagACAAAGCAGATACACCTCAAACCAATACTATCGGTTCCGCATTTATGCCTTGGGGTTTGCACCGTGAACCGCCAGTAGCTCATCAAAATACTCGGAGACAGCTGGCAACTAGATTGACATATCATGTACCTGAACCGACCACGTTGTTTCATCattttagaaCACAATCTACTGGAGTTTCTTGCGGGCCGCCATTTTATTTGCCGCCTTTTTTGCTGGAATCAGCTGAGTCATGTCACGTTGCCAACTGTGCAGAATGTGCATCAGCTGCAGCTCAACAGATATGA
- Protein Sequence
- MDSSEGRRPKCARCRNHGVISWLKGHKKRCSFKECVCPKCNLIAERQRVMAAQVALKRQQAAEDAIALGLASVTSGTKYGCLPQGPIFGMTVPTSKSPVAVEETTRPEENPTATSQTSDGSKGVVPQGSLDLLCRLFPEKKRSVLELVLRRCEHDLLKAIEHCVPLCKTLTTAPKSRKSSTDKADTPQTNTIGSAFMPWGLHREPPVAHQNTRRQLATRLTYHVPEPTTLFHHFRTQSTGVSCGPPFYLPPFLLESAESCHVANCAECASAAAQQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167635;
- 90% Identity
- iTF_00468956;
- 80% Identity
- -