Sgrm009371.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- dmd-4_1
- Assembly
- GCA_003264975.1
- Location
- QEWZ01001759.1:2373468-2377606[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-26 5.5e-22 77.9 11.5 1 47 7 53 7 53 0.99 2 2 0.32 2.8e+03 -1.2 0.9 4 9 265 270 259 276 0.56
Sequence Information
- Coding Sequence
- ATGGACAGCTCCGAAGGAAGACGACCAAAGTGCGCGCGATGTAGGAACCACGGCGTTATATCATGGTTGAAGGGTCACAAAAAACGGTGCTCCTACAAAGAGTGCGTGTGCCCGAAGTGCAATCTTATAGCTGAAAGACAACGGGTTATGGCTGCTCAAgtgGCATTAAAAAGGCAACAAGCGGCAGAGGATGCTATAGCATTGGGATTGGCTTCGGTTACTTCTGGAACTAAATACGGATGTTTACCACAAGGTCCTATATTTGGTATGACTGTTCCCACATCCAAGTCTCCTGTCGCAAAAGAAGAAGCTGCTCGACCTGAAGAAAACTCTACAGCGACTATACAGGTATCAGACGGAACCAAGGGAGTTGTACCACCAGGATCTCTCGATTTGCTTTGTCGATTATTTCCAGAGAAAAAACGATCGGTCCTAGAACTGGTACTTCGTCGGTGTGAACATGATTTATTGAAAGCTATTGAGCATTGTGTTCCTTTATGCAAGTCTTTGGCAGCAACTTCAAAATCTCAGAAAACTAGTACAGACAAGATTGATACACCTCAGACTACTACAATTGGTTCTGCATTTATGCCTTGGGGCTTACACCGTGAACCACCAGTGGCTCATCAAAATGCTCGGAGGCAGCTGGCTACTAGATTGACTTATCATGTACCAGAACCGACAACTACGTTATTTCATCATTTTCGgaccCAATCTACTGGAGTTTCGTGTGGGCCGCCTTTTTATTTGCCGCCGTTTTTGCTAGAATCAGCTGAGTCATGTCATGTAGCCAATTGCGCTGAATGTGCATCAGCTGCAGTTCAACAGATATGA
- Protein Sequence
- MDSSEGRRPKCARCRNHGVISWLKGHKKRCSYKECVCPKCNLIAERQRVMAAQVALKRQQAAEDAIALGLASVTSGTKYGCLPQGPIFGMTVPTSKSPVAKEEAARPEENSTATIQVSDGTKGVVPPGSLDLLCRLFPEKKRSVLELVLRRCEHDLLKAIEHCVPLCKSLAATSKSQKTSTDKIDTPQTTTIGSAFMPWGLHREPPVAHQNARRQLATRLTYHVPEPTTTLFHHFRTQSTGVSCGPPFYLPPFLLESAESCHVANCAECASAAVQQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01167635;
- 90% Identity
- iTF_00468956;
- 80% Identity
- -