Basic Information

Insect: Parnassius smintheus
Gene Symbol: stc
Assembly: GCA_036936625.1
Location: JAUPFT010000004.1:41619771-41651030[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 9.2e+04 -4.2 1.6 15 19 462 466 461 466 0.81

2 15 0.045 2e+03 1.2 1.4 2 10 494 502 494 502 0.92

3 15 3.4e-05 1.5 11.1 18.1 4 19 510 525 508 525 0.93

4 15 5.1e-08 0.0023 20.1 13.3 1 19 561 579 561 579 0.97

5 15 0.00029 13 8.2 14.4 1 19 620 638 620 638 0.99

6 15 2.1e-07 0.0096 18.2 13.8 1 19 679 701 679 701 0.88

7 15 2 9.2e+04 -5.2 2.2 6 10 731 735 731 735 0.94

8 15 0.014 6.3e+02 2.8 7.3 1 11 741 751 741 752 0.93

9 15 0.039 1.8e+03 1.4 0.3 4 10 756 762 755 763 0.93

10 15 3.4e-06 0.15 14.3 14.0 3 19 770 786 768 786 0.92

11 15 1 4.7e+04 -3.2 0.7 5 10 814 819 814 819 0.89

12 15 0.059 2.7e+03 0.8 8.4 10 18 833 841 830 842 0.92

13 15 6.2e-08 0.0029 19.9 14.0 1 17 878 896 878 902 0.84

14 15 0.0055 2.5e+02 4.1 11.4 1 19 908 931 908 931 0.88

15 15 0.56 2.6e+04 -2.4 0.2 8 12 947 951 946 951 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	9.2e+04	-4.2	1.6	15	19	462	466	461	466	0.81
2	15	0.045	2e+03	1.2	1.4	2	10	494	502	494	502	0.92
3	15	3.4e-05	1.5	11.1	18.1	4	19	510	525	508	525	0.93
4	15	5.1e-08	0.0023	20.1	13.3	1	19	561	579	561	579	0.97
5	15	0.00029	13	8.2	14.4	1	19	620	638	620	638	0.99
6	15	2.1e-07	0.0096	18.2	13.8	1	19	679	701	679	701	0.88
7	15	2	9.2e+04	-5.2	2.2	6	10	731	735	731	735	0.94
8	15	0.014	6.3e+02	2.8	7.3	1	11	741	751	741	752	0.93
9	15	0.039	1.8e+03	1.4	0.3	4	10	756	762	755	763	0.93
10	15	3.4e-06	0.15	14.3	14.0	3	19	770	786	768	786	0.92
11	15	1	4.7e+04	-3.2	0.7	5	10	814	819	814	819	0.89
12	15	0.059	2.7e+03	0.8	8.4	10	18	833	841	830	842	0.92
13	15	6.2e-08	0.0029	19.9	14.0	1	17	878	896	878	902	0.84
14	15	0.0055	2.5e+02	4.1	11.4	1	19	908	931	908	931	0.88
15	15	0.56	2.6e+04	-2.4	0.2	8	12	947	951	946	951	0.81

Sequence Information

Coding Sequence: ATGTCTCATTGGAATAACTCATACGCTTATAACAACCAATTCCAAGGAGCGCCAAATACATGGAACGGTGATTTAAGTGGGCAATATGTTAACCAACCATATTATGGAAACAGACAATTTGAGTCAAACaatcaatatatcagttttgaaGAATTCTTAACTCAAATGCAGGGTAATAATGTGCCACAGAATAATGCTTCTAACTATAATAATGTACAGTACCAGGCATATCTAAATAGTCAATACAGTTATCAAAATGTACCCTCACAAAATAATCAAATGGATTTCAATTATGGTCCCAGTTCATCCAATGCCAGTAACAATATAGATACTTATCAAATCAATGTTCAAAGTCATTTCAACCCAGTGTTACCAGATCCAAGTTCTTATTCCAATGAAGTTGTGATTAAATCTAAGCTTACTCCAACTGCAACTGAATTTGTGCCAAAAAGTTCTATAAATTTACCATCCACCAGTACTCAAAGTGCTTTATCACAGGTGTCGGATACATTTAATGGTGTAAGTGATTCAAAAACTAGTAATTCAAAATCATCCGAAAGTAATTGGAGAGAAAGGCCAAGTAGTTCACACAGTGAAGGTACTAATCAATCTGATACAAAcaattttagtcgttatcaaAAGAAGTATAAAAACCCAGAAAACACCACTCGGAACTCAAATAAtcgtaatgaaaataataaacataacaaTGAATCAAATCAAGATCCCAATAATCATTATCATAACAGCAATAATCATCACATAGATTCTTTCATTCAAAACCAAGAATCGGAAAGTCAAAACACAGAAACCTATTCTAACCAAAATGATAGAAATTATGAATCGAGACACCATACATATGAATCTAAAAAATCTAATAATGATACCTATCCATCAAAgtcaaattataaaacaaaaaataaagaacCAGAAGCATGTAGAACTTTTTACAATAGCACTATAAATAAAGGCAGCCAAGATGTTAGAAATGGTAGAGGAGAAAATTCTGGAAGGCAGAAAAACTGGGTTGGAAGTCAACGGGTGCGAACAGTAGACCGTAATATCGTTGAAGATGTACAATATGCTAATACTTACATGCAATATAAAGACGAAAGAGTAGAGCGGGTGAATAAAAGCGAAAAGACTGCTAGTCCTAATAGGGGAAGAAACAAAACTGTCACTGAATTAGTAGGTAACTCTGCTATGACACAACGTGAACGTTTGAGTGAGCAATTAGACAAAGGCACTTTAGAATGCCTGGTTTGCTGTGAAAGGGTCAAACAAATTGATTCAGTCTGGTGGTGCTCCAATTGTTACCATGTCTTACATCTTAGGTGTATCAGGAAATGGGCTATGAGTAGTTTAGTTGAAGGTAAATGGCGATGCCCTGCTTGTCAGAACACGAATGAAGAGATTCCTGTGGAGTACCGTTGTATGTGTGGTGCGGTCCGATCACCTGAGTACTCACGTGGTGCAATAGGAGCACATACATGTGGTAAAGCCTGTCGCAGACCGAGGAGCTGCCCACATCCTTGCACACTGCTATGCCACCCTGGTCCATGTCCTCCTTGTCAAGCTACTATTAGCAAGAAATGTGGTTGCGGTGCTGAGACACGTTCCGTACTCTGCAGCAGCAAGCTGCCGCAGCTGTGCGGTCGAGAGTGTAAACGTAAGCTGACGTGTGGAGTCCACGAATGTCAACGTGAATGCCACGAAGGTCCCTGTGATGATTGTTCAGAAACTGTTACACAAGTGTGTTACTGCCCTGCGGCGAAGTCCCGCTCAGTGCCATGCACAGCGGAGACCGGCACTTGTGACACATGGTCGTGCGGGGCGGAATGCGCTCGTGTTCTGTCATGCGGCGCGCACGTGTGTAGACGTGCGTGCCATCAGCCTCCGTGTTCGCCTTGCCCGCTTCGCCCTGAGAACGTAAAGTCTTGCCCCTGCGGCAACACCAAAATTGAAAAAGATCAGCGCAAGTCATGTGCCGATCCTATTCCCCTTTGCGGAAATATATGTGCAAAACCGTTACCATGCGGTCCTGAAGGAGACAAACACTTCTGTAAACAGTTGTGTCATGAAGGACCGTGCCCAACATGCCCGGACAAAACACTGTTGCAGTGTCGCTGTGGTCATTCCAGTCGCGAAGTGCCTTGTTCAGAATTGCCAGAAATGGTCAATAATGTACTGTGCCAAAAGAAGTGTAACAAGAAGCTGTCGTGCGGGCGGCACCGCTGCCGCACGGCGTGTTGCGCGGCGCAGTCGCACCGCTGCGCCGTGGTGTGCGGGCGCACGCTGTCGTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCCATGTCCCCGCCTCAGTTTCGATGAGCTCCGCTGCGAGTGTGGCGCGGAGGTGGTTCTACCACCAGTGCGCTGTGGCACCAGACCTCCAAAGTGCAATGCTCCTTGCCGTCGCGAGAGACCTTGCAAGCATCCACCCCACCATTCCTGCCACACTGACGACTGCCCGCCTTGTGTGGTGCTCACCACCAAGATGTGTCACGGACAGCACGAGGAGCGCAAGACAATACCATGTTCTCAAGAAGAGTTCTCATGTGGAATGCCGTGCGGAAAACCTTTGTCCTGCGGCAAGCATACTTGCATCAAGACATGCCACAAAGGACCTTGTAATACTGAAAAGTGCAGCCAGCCGTGCACGGAGAAGCGGGCGAGCTGCGGGCACGGGTGCGCGGCGCCGTGCCACGTGGCGAGCGGCGGCGCGTGCCCCAGCGCGGCGCCGTGCCGCCGGGTCGTGCGCGCCACTTGCCCCTGCGCGCGCCGTGCCGCCGACCGCACGTGCCACGAGAACGTGCGTGACTACGCCAAGATGATAAGTACGCTAGCGGCTACGAAAATGCAAGAGGGGGGCTCGGTCGACCTATCTGAAGTGCAACGCCCTGGATCAATGCTGAAGACGCTGGAGTGCGATGACGAGTGCCGCATGGAGGCGCGCAGCCGGCAGCTGGCGCTAGCGCTGCAGATCCGCAACCCGGACGTTTCGGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCAGCACCGCCGCGCGTGAGCCCGCCTTCGCGCAGCACGTGCACGACTGCCTCACCGACCTCGTGCAGCTCGCCAAGAAGTCGAAACAGAAGACGCGCTCGCACTCGTTCCCTTCAATGAACCGTCAAAAGCGACAGTTCATCCACGAGCTGTGCGAGCACTTTGGTTGCGAGAGTGTCGCGTACGACGCGGAGCCCAACAGGAATGTGGTCGCCACCGCTGACAAGGAAAAGGTAAAGTCTCACTCTAATTCTAAGAAGTTAAATGTTTATTGA
Protein Sequence: MSHWNNSYAYNNQFQGAPNTWNGDLSGQYVNQPYYGNRQFESNNQYISFEEFLTQMQGNNVPQNNASNYNNVQYQAYLNSQYSYQNVPSQNNQMDFNYGPSSSNASNNIDTYQINVQSHFNPVLPDPSSYSNEVVIKSKLTPTATEFVPKSSINLPSTSTQSALSQVSDTFNGVSDSKTSNSKSSESNWRERPSSSHSEGTNQSDTNNFSRYQKKYKNPENTTRNSNNRNENNKHNNESNQDPNNHYHNSNNHHIDSFIQNQESESQNTETYSNQNDRNYESRHHTYESKKSNNDTYPSKSNYKTKNKEPEACRTFYNSTINKGSQDVRNGRGENSGRQKNWVGSQRVRTVDRNIVEDVQYANTYMQYKDERVERVNKSEKTASPNRGRNKTVTELVGNSAMTQRERLSEQLDKGTLECLVCCERVKQIDSVWWCSNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNEEIPVEYRCMCGAVRSPEYSRGAIGAHTCGKACRRPRSCPHPCTLLCHPGPCPPCQATISKKCGCGAETRSVLCSSKLPQLCGRECKRKLTCGVHECQRECHEGPCDDCSETVTQVCYCPAAKSRSVPCTAETGTCDTWSCGAECARVLSCGAHVCRRACHQPPCSPCPLRPENVKSCPCGNTKIEKDQRKSCADPIPLCGNICAKPLPCGPEGDKHFCKQLCHEGPCPTCPDKTLLQCRCGHSSREVPCSELPEMVNNVLCQKKCNKKLSCGRHRCRTACCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRLSFDELRCECGAEVVLPPVRCGTRPPKCNAPCRRERPCKHPPHHSCHTDDCPPCVVLTTKMCHGQHEERKTIPCSQEEFSCGMPCGKPLSCGKHTCIKTCHKGPCNTEKCSQPCTEKRASCGHGCAAPCHVASGGACPSAAPCRRVVRATCPCARRAADRTCHENVRDYAKMISTLAATKMQEGGSVDLSEVQRPGSMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRSTAAREPAFAQHVHDCLTDLVQLAKKSKQKTRSHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKVKSHSNSKKLNVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00923295;
90% Identity: iTF_01154711; iTF_01157358; iTF_01155976;
80% Identity: -