Basic Information

Insect: Parnassius mnemosyne
Gene Symbol: stc
Assembly: GCA_963668995.1
Location: CAVLGL010000093.1:12710048-12731909[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 7.3e+04 -4.3 1.6 15 19 464 468 463 468 0.81

2 14 0.048 1.7e+03 1.1 1.4 2 10 496 504 496 504 0.92

3 14 3.6e-05 1.3 11.1 18.1 4 19 512 527 510 527 0.93

4 14 5.5e-08 0.002 20.1 13.3 1 19 563 581 563 581 0.97

5 14 0.00013 4.8 9.2 15.0 1 19 622 640 622 640 0.99

6 14 2.3e-07 0.0082 18.1 13.8 1 19 681 703 681 703 0.88

7 14 2 7.3e+04 -5.3 2.2 6 10 733 737 733 737 0.94

8 14 0.015 5.3e+02 2.7 7.3 1 11 743 753 743 754 0.93

9 14 0.041 1.5e+03 1.3 0.3 4 10 758 764 757 765 0.93

10 14 3.6e-06 0.13 14.2 14.0 3 19 772 788 770 788 0.92

11 14 1.1 4e+04 -3.3 0.7 5 10 816 821 816 821 0.89

12 14 0.063 2.3e+03 0.7 8.4 10 18 835 843 832 844 0.92

13 14 6e-08 0.0022 19.9 13.9 1 17 880 898 880 904 0.84

14 14 0.016 6e+02 2.6 12.8 1 19 910 933 910 933 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	7.3e+04	-4.3	1.6	15	19	464	468	463	468	0.81
2	14	0.048	1.7e+03	1.1	1.4	2	10	496	504	496	504	0.92
3	14	3.6e-05	1.3	11.1	18.1	4	19	512	527	510	527	0.93
4	14	5.5e-08	0.002	20.1	13.3	1	19	563	581	563	581	0.97
5	14	0.00013	4.8	9.2	15.0	1	19	622	640	622	640	0.99
6	14	2.3e-07	0.0082	18.1	13.8	1	19	681	703	681	703	0.88
7	14	2	7.3e+04	-5.3	2.2	6	10	733	737	733	737	0.94
8	14	0.015	5.3e+02	2.7	7.3	1	11	743	753	743	754	0.93
9	14	0.041	1.5e+03	1.3	0.3	4	10	758	764	757	765	0.93
10	14	3.6e-06	0.13	14.2	14.0	3	19	772	788	770	788	0.92
11	14	1.1	4e+04	-3.3	0.7	5	10	816	821	816	821	0.89
12	14	0.063	2.3e+03	0.7	8.4	10	18	835	843	832	844	0.92
13	14	6e-08	0.0022	19.9	13.9	1	17	880	898	880	904	0.84
14	14	0.016	6e+02	2.6	12.8	1	19	910	933	910	933	0.88

Sequence Information

Coding Sequence: atgTCTCATTGGAATAACTCATACGCTTATAACAACCAGTTCCAAGGAGCGCCCAATACATGGAATAGTGATTTAAGTGGGCAATATGTAAACCAACAATATTATGGAAACAGACAATTTGAGTCAAACAATCAGTATGTCAGTTTTGAAGAATTTTTAACTCAAATGCAGGGTAATAGTGTTCCACAGAATAATGCTTCTAACTATAATAATGTACAGTACCAGGCATATCCCAATAATCAATATAGTTATCAAAATGTACCCTCACAAAACAGTCAAATGGATTTTAACTATGGTCCTAGCTCATCCAATGCCAGTAACAATATAGATACTTACCAAGTCAATGTTCAAAATCATTTCAACCCAGTCTTAACTGATCCAAGTTCTTATTCAAATGAAGTTGTGATTAAATCTAAGCTCACACCAACTGCAACTGAATTTGTGCCAAAAAGCTCTATGAATTTGCCATCTACCAGTACTCAAAGTGCTTCATCACAGGTGTCAGATACATCCAATGGTGTAAGCGAATCAAAAACTAATAATTCAAAATCATCTGAAAGTAATTGGAGAGAAAGGCCAAGTAATTCACACTGTGAAGCTACAAATTCTCAAACTGATATAAACAATTTTAGTCGTTATCAAAAGAAGTATAAAAACCCAGAAAACACCACCAGGAACTCAAATGGCCGTAACATTGAAAATAATAAACGTAACAATGAATCTAATCAAGATGCCAATAATCGTTATCATAACAGCAATAACCATTACATAGATTCTTCCGTTCAAAACCAAGAATCAGAAAGTCAAAACACAGAATCCCATTCTAACCAAAATGATAGAAATTATGACTCTGGAAACCACATGTATGAATCTAAAAAATCTAATAACGATACCTATCCATCAAAgtcaaattataaaacaaaaaataaagaacCAGAGGCATGTAGAACTTTTTACAATAGTACTATAAATAAAAGCAGCCAAGATGTTAGAAATGGTAGAGGAGAAAGTTCTGGAAGGCAGAAAAACTGGGTAGGAAGCCAACGGGTACGAACAGTAGATCGTAATGTTGTTGAAGATGTACAATATGCTAATACTTACATGCAATATAAAGATGAAAGAGTAGAGAGAGTGACAAAAAGTGAAAAGACTGCTAGTCCTAATAGGGGAAGAAATAAGATTGTCACTGAATTAGTAGGTAACTCAGCAATGACCCAACGTGAACGTTTGAGTGAGCAATTAGACAAGGGCACTTTAGAATGCCTGGTGTGCTGTGAAAGGGTCAAACAAATTGATTCAGTCTGGTGGTGCTCCAATTGTTACCATGTCTTACATCTTAGATGTATCAGGAAATGGGCTATGAGTAGTTTAGTTGAAGGTAAATGGCGATGCCCAGCTTGTCAGAACACAAATGAAGAGATTCCTATGGAATACCGTTGTATGTGTGGTGCGGTCCGATCACCTGAGTACTCACGTGGCGCAGTAGGAGCCCATACATGTGGTAAAGCCTGTCGCAGACCGAGGAGCTGCCCACATCCTTGCACACTGCTATGCCACCCTGGCCCATGTCCTCCTTGTCAAGCTACTATCAGCAAGAAATGTGGTTGCGGAGCTGAGACGCGCTCCGTACTCTGCAGCAGCAAGCTGCCGCAGCTGTGCGGTCGAGAGTGTAAACGTAAGCTGGCGTGCGGAGTCCACGAATGTCAACGTGAATGTCACGAAGGTCCCTGCGATGATTGTTCAGAAACTGTAACACAAGTGTGCTACTGCCCTGCAGCGAAGTCCCGATCAGTGGCATGCACAGCGGAGACCGGCACTTGTGACACGTGGTCCTGCGGGGCGGAGTGCGCTCGCGTTCTGTCGTGCGGCGCGCACGTGTGCAGGCGCGCGTGCCATCCGCCGCCGTGCTCGCCTTGCCCGCTGCGCCCCGACAACGTAAAAGCCTGCCCCTGCGGGAACACCAGaATTGAAAAAGATCAGCGAAAGTCATGTGCCGATCCTATTCCCCTTTGCGGAAATATATGTGCAAAGCCGTTACCATGCGGTCCTGAAGGCGACAAACACTTTTGTAAACAGTTGTGTCATGAAGGACCATGCCCAACATGCCCGGATAAAACACTGTTGCCATGCCGCTGTGGTCATTCAAGTCGTGAAGTGCCTTGTTCAGAATTGCCAGAAATGATCAATAATGTACTGTGTCAAAAGAAGTGTAACAAGAAGCTGTCGTGCGGGCGACACCGGTGCCGCACGGCGTGCTGCGCGGCGCAGTCGCACCGCTGCGCCGTGGTGTGCGGGCGCACGCTGTCGTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGCCACTGCGCGCCCTGTCCCCGCCTCAGTTTCGATGAACTCCGCTGCGAGTGCGGTGCGGAAGTGGTTCTACCACCAGTGCGCTGTGGCACCAGACCTCCGAAGTGTAACGCTCCTTGTCGTCGCGAGAGACCTTGCAAGCATCCACCCCACCATTCCTGTCACACCGACGACTGCCCTCCTTGTGTGGTGCTCACCACCAAGATGTGTCACGGACAGCATGAGgAGCGCAAGACAATACCGTGTTCCCAAGAAGAGTTCTCCTGTGGAATGCCGTGCGGAAAGCCTTTGTCCTGTGGCAAGCATACTTGCATCAAGACATGCCACAAAGGACCTTGTAATACTGAAAAGTGCAGCCAGCCGTGCACGGAGAAGCGTCCAAGCTGCGGGCACGGGTGCGCGGCGCCGTGCCACGTGGCGGGCGGCGGCGCGTGCCCCAGCAGCGCGCCGTGCCGCCGCACCGTGCGCGCCACGTGCCCCTGCGCGCGCCGCGCCGCCGACCGCATGTGTCACGACAACGCGCGTGATTACGCTAAGATGATGAGTACGCTAGCGGCTACGAAAATGCAAGAGGGAGGCTCCGTAGACCTATCTGAAGTGCAACGCCCTGGATCAATGCTGAAGACGCTGGAGTGCGACGACGAGTGCCGCATGGAGGCGCGCAGCCGGCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCAGCACCGCCGCGCGCGAGCCCGCCTTCGCGCAGCACGTGCACGACTGCCTCGCCGACCTCGTGCAGCGCGCCAAGAAGTCGAAACAGAAGACGCGCTCGCACTCGTTCCCTTCAATGAACCGTCAAAAGCGACAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGTGTCGCGTACGACGCGGAACCCAACCGGAATGTGGTCGCCACCGCTGACAGAGAAAAATCGTGGTTGCCGGCGATGAGTGTTTTGGAAGTGTTAGCCCGAGAGGCGGGCAAACGTCGCGTTCCCGGGCCGGTACTGCGGGCGCCAGCTACCAGCGCCAGTACAGCACCAGCAACTACCCCCACTACTTCCACCAGGACAACCAGCGGCTGGGCAACTCTGACGTCGACGAACGCCTGGGCTTCCCGCAGCCAGCCGCGACCCACCGCAGAACCCAAAATAGATTATTTCGACAATCCGCCCGAAAACTAG
Protein Sequence: MSHWNNSYAYNNQFQGAPNTWNSDLSGQYVNQQYYGNRQFESNNQYVSFEEFLTQMQGNSVPQNNASNYNNVQYQAYPNNQYSYQNVPSQNSQMDFNYGPSSSNASNNIDTYQVNVQNHFNPVLTDPSSYSNEVVIKSKLTPTATEFVPKSSMNLPSTSTQSASSQVSDTSNGVSESKTNNSKSSESNWRERPSNSHCEATNSQTDINNFSRYQKKYKNPENTTRNSNGRNIENNKRNNESNQDANNRYHNSNNHYIDSSVQNQESESQNTESHSNQNDRNYDSGNHMYESKKSNNDTYPSKSNYKTKNKEPEACRTFYNSTINKSSQDVRNGRGESSGRQKNWVGSQRVRTVDRNVVEDVQYANTYMQYKDERVERVTKSEKTASPNRGRNKIVTELVGNSAMTQRERLSEQLDKGTLECLVCCERVKQIDSVWWCSNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNEEIPMEYRCMCGAVRSPEYSRGAVGAHTCGKACRRPRSCPHPCTLLCHPGPCPPCQATISKKCGCGAETRSVLCSSKLPQLCGRECKRKLACGVHECQRECHEGPCDDCSETVTQVCYCPAAKSRSVACTAETGTCDTWSCGAECARVLSCGAHVCRRACHPPPCSPCPLRPDNVKACPCGNTRIEKDQRKSCADPIPLCGNICAKPLPCGPEGDKHFCKQLCHEGPCPTCPDKTLLPCRCGHSSREVPCSELPEMINNVLCQKKCNKKLSCGRHRCRTACCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRLSFDELRCECGAEVVLPPVRCGTRPPKCNAPCRRERPCKHPPHHSCHTDDCPPCVVLTTKMCHGQHEERKTIPCSQEEFSCGMPCGKPLSCGKHTCIKTCHKGPCNTEKCSQPCTEKRPSCGHGCAAPCHVAGGGACPSSAPCRRTVRATCPCARRAADRMCHDNARDYAKMMSTLAATKMQEGGSVDLSEVQRPGSMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRSTAAREPAFAQHVHDCLADLVQRAKKSKQKTRSHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPATSASTAPATTPTTSTRTTSGWATLTSTNAWASRSQPRPTAEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00923295;
90% Identity: iTF_01160166;
80% Identity: -