Basic Information

Insect: Luehdorfia chinensis
Gene Symbol: stc_1
Assembly: GCA_029286615.1
Location: JAGSMQ010000028.1:1573062-1592533[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1 2.9e+04 -4.3 1.6 15 19 458 462 457 462 0.81

2 15 0.024 6.8e+02 1.1 1.4 2 10 490 498 490 498 0.92

3 15 1.8e-05 0.52 11.1 18.1 4 19 506 521 504 521 0.93

4 15 1.6e-07 0.0047 17.6 10.7 1 19 557 575 557 575 0.97

5 15 3.6e-05 1.1 10.1 14.3 1 19 616 634 616 634 0.99

6 15 1.1e-07 0.0032 18.1 12.4 1 18 675 696 675 697 0.86

7 15 1 2.9e+04 -5.2 2.2 6 10 727 731 727 731 0.94

8 15 0.0016 46 4.8 7.4 1 11 737 747 737 748 0.95

9 15 0.021 5.9e+02 1.3 0.3 4 10 752 758 751 759 0.93

10 15 1.8e-06 0.052 14.3 14.0 3 19 766 782 764 782 0.92

11 15 1 2.9e+04 -6.4 4.6 9 16 810 816 809 822 0.54

12 15 0.00024 6.8 7.5 9.4 10 18 829 837 826 838 0.92

13 15 1.3e-08 0.00037 21.1 13.5 1 17 874 892 874 898 0.84

14 15 0.013 3.8e+02 1.9 11.0 1 18 904 926 904 927 0.81

15 15 0.18 5.1e+03 -1.7 0.3 7 12 942 947 942 947 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1	2.9e+04	-4.3	1.6	15	19	458	462	457	462	0.81
2	15	0.024	6.8e+02	1.1	1.4	2	10	490	498	490	498	0.92
3	15	1.8e-05	0.52	11.1	18.1	4	19	506	521	504	521	0.93
4	15	1.6e-07	0.0047	17.6	10.7	1	19	557	575	557	575	0.97
5	15	3.6e-05	1.1	10.1	14.3	1	19	616	634	616	634	0.99
6	15	1.1e-07	0.0032	18.1	12.4	1	18	675	696	675	697	0.86
7	15	1	2.9e+04	-5.2	2.2	6	10	727	731	727	731	0.94
8	15	0.0016	46	4.8	7.4	1	11	737	747	737	748	0.95
9	15	0.021	5.9e+02	1.3	0.3	4	10	752	758	751	759	0.93
10	15	1.8e-06	0.052	14.3	14.0	3	19	766	782	764	782	0.92
11	15	1	2.9e+04	-6.4	4.6	9	16	810	816	809	822	0.54
12	15	0.00024	6.8	7.5	9.4	10	18	829	837	826	838	0.92
13	15	1.3e-08	0.00037	21.1	13.5	1	17	874	892	874	898	0.84
14	15	0.013	3.8e+02	1.9	11.0	1	18	904	926	904	927	0.81
15	15	0.18	5.1e+03	-1.7	0.3	7	12	942	947	942	947	0.84

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAACTCTTACGCTTATAACAACCAATTTCAAGGACCACCTAATACATGGAATGGTGATTTAAATGGGCAATATGTAAACCAAGCATATTATGGCAACAGACAATTTGAGTCAAACAATCAATATGTCAGTTTTGATGAGTTTTTATCACAAATGCAGAGTAGTGGTGTGCCACAGAACAATGCTTCTAACTACAATAATGTGCAATACCAAGCATATCCCAATAATCAATACAGTTATCAAAATGTACCCTCACAGAACACTCAAATTGACTTCAATTATGGCCCTAGTGCATCTAATGTAAGTAACAATATAGAAACCTATCAAGGGAATGATCAAAATCAATTCAACCCAGTGTCAACCGATTCAAGTTCTTATTCAAATGAAGTTGTGATTAAATCAAAGCTTACACCAACTGCTACCGAATTTGTGCCTAAAAGCATGAATGCACCATCGACCAGTACTCAGATACCTCCTTCACATGAGTCATCAGTTGCATACAATGGCATAAGTGAttctaaaagtaataatttaaaatcatcaGAAAGTAATTGGAGAGAAAGACCTAATAGTTCCAATATTGATGTCTCAAATCCTCAACCTGAACAGAACAGTTTTAGTcgatatcaaaaaaattataaaaacccaGAAACAAACAATCGTAATCGTGACTCAAATGGCCGTAACTTTGAAAATGCCAAACGTAACACCAGTAATTCAAATAGTCTTACAAACTATTACAGTAAAGATTCTACTCAAAACCAAGAATCTGAAGGTCAAACTGCAGAAACCTACACACAGCAGAGTGAACGAAATTACGATACTGGAAATCGTCATTATGaatcaaaaaaacataataatgataatcAAACAAGGTCAAATTCTAAAACTAAAAGTAAAGATCCAGAAGCATGTAGAACTTTTTACAATAGCTCTATAAATAAAAGCAGTCAAGATGTCAGAAATGGAAGAGGAGAAAGTTCTGGAAGGCAAAGAAACTGGGTGGGAAGCCAACGGCTCCGAACTGTAGACCGCAACATTGTTGAAGATGAGCAATATGCTAATATGTACTCACAGTATAAAGATGAAAGAGTAGAGAGAGTGACAAAAAGCGAAAAGACTGCGAGTCCTGCGAGAGCTAGAAATAAGCCTGTTAGCGATTCAATGGGCAATACAGCTATGACCCAACGTGAACGTTTAACAGAACAGTTGGATAAGGGTACTTTGGAATGCTTGGTGTGCTGCGAACGGGTTAAACAAACAGACTCTGTCTGGTGGTGCTCCAACTGTTACCATGTCTTACATCTTAGATGTATCAGGAAATGGGCCATGAGTAGTTTAGTAGAAGGAAAATGGCGCTGCCCAGCTTGTCAGAACACTAATGAAGAGATTCCAACAGAATACCGTTGTATGTGCGGTGCGGTCCGTTCTCCCGACTACTCGCGCGGCGCAGTGGGAGCGCATACGTGCGGGAAAGCTTGTCGCCGGCCGAGAAGCTGCCCTCATCCATGCACACTGCTATGCCACCCTGGTCCTTGTCCTCCTTGCCAAGCCACTATTAGCAAacaATGTGGTTGCGGTTTCGAGACACGCTCTGTGCTCTGTAGCAGCAAGTTGGCCCAGTTGTGTGGACGAGAGTGTAAACGCAAACTGTCTTGTGGAGTTCACGATTGCCAGCGTGAATGCCATGAAGGTCTCTGTGATGATTGTACAGAGACAGTCACTCAAGTGTGCTATTGCCCGGCGTCGAAGTCCCGTTCCGTCCCTTGCACAGCTGAGACGGGGACTTGCGACACGTGGTCCTGCAGTGCGGCGTGCGCACGTGTGCTCTCATGTGGTGCGCACGTGTGTCGGCGCGCTTGTCACCCTCCGCCATGTGCGCCGTGCCCACTGCGCCCCGACAACGTGCACGCCTGTCCCTGCGGGAATACTAGGATTGAAAAAGATCAGCGCAAGTCCTGTACCGACCCTATTCCTCTTTGCGGAAACATCTGCACAAAGCCATTACCATGCGGACCTGAAGGAAATAAACACTTCTGTAAACAGCTGTGCCATGAAgggCCGTGCCCAACATGTCTTGACAACACATTGTTACCATGCCGCTGTGGTCATTCCAGTCGCGACGTGCCTTGCTCAGATTTGCCAGAAATGCTCAACAATATACTGTGCCAAAAAAAGTGTAACAAGAAATTATCATGCGGCCGTCACCGTTGCCGTACTGTTTGTTGCGCGGCGCAGTCCCACCGCTGCGCTGTAGTGTGTGGCCGAACATTGTCTTGCCAGTTGCATCGCTGTGAGGAGTTCTGTCACACTGGACACTGCGCTCCTTGTCCCCGTGTCAGTTTCGAGGAACTCCGTTGCGAATGTGGCGCGGAAGTGGTTCTACCACCGGTACGCTGTGGCACCCGACCACCACCGTGCCACGCACCTTGCCGTCGCGAACGTCCGTGCAGCCATCCGCCACACCACTCCTGCCACACCGGAGACTGTCCGCCGTGCGTCGTGCTCACGACCAAAATGTGCCACGGGAAGCACGAGGAACGCAAAACAATACCGTGTTCTCAAGAAGAATTTTCGTGTGGACTGCCTTGTGGAAAGCCTCTGCCGTGCGGCAAACACACTTGCATCAAAACATGCCATAAAGGACCTTGCGACACTGAGAAATGCAGCCAGCCGTGCAACGAGAAGCGTCCAAGTTGCGGGCACGTGTGTGCGGCTCCCTGCCACGTGGCGGGCGGCGGCGTCTGCCCCAGCAGCGCGCCGTGCCGCAAGCCCGTGCGCGCCACCTGCCCCTGCGCCCGGCGCTCCGCTGAGCGCACCTGCCACGAAAACGCACGGGACTACGCTAAGATGATGAGTGCGCTGGCGGCTACTAAAATGCAAGAGGGAGGTTCCGTCGACATATCCGAAGTGCAACGTCCTGGTGCGATGCTAAAGACATTGGAGTGCGACGACGAATGCCGCATGGAGGCGCGCTGCAGGCAGCTGGCGCTAGCGTTGCAGATCCGCAACCCGGACGTATCCGCGAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCTCCACCGCAGTACGTGAGCCCGCCTTTGCGCAGCAAGTGCACGACTGCCTCACCGAGCTCGTGCAGCGGGCGAAAAAGTCAAAACAGAAGACCCGCGCGCACTCATTTCCATCTATGAACCGCCAAAAGCGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTCGCCTACGACGCTGAGCCGAACCGGAACGTCGTCGCAACTGCCGACAGGGAGAAGTCATGGCTGCCAGCAATGAGCGTACTGGAAGTGTTAGCCCGGGAAGCAGGCAAGCGTCGCGTACCCGGCCCGGTTCTCAGAGCTCCACCCACTGCCACCCACACAGCCACAACATCTACGCCAACTACTTCCGCCAGGTCACCTGGTGGCTGGGCGACTCTGACATCAACCAACGCTTGGGCGTCCCGCAGTCAACCTCGCCCTACCGCGGAGCCGAAGATAGACTACTTCGATAACCCGCCCGAAAACTAG
Protein Sequence: MSQWNNSYAYNNQFQGPPNTWNGDLNGQYVNQAYYGNRQFESNNQYVSFDEFLSQMQSSGVPQNNASNYNNVQYQAYPNNQYSYQNVPSQNTQIDFNYGPSASNVSNNIETYQGNDQNQFNPVSTDSSSYSNEVVIKSKLTPTATEFVPKSMNAPSTSTQIPPSHESSVAYNGISDSKSNNLKSSESNWRERPNSSNIDVSNPQPEQNSFSRYQKNYKNPETNNRNRDSNGRNFENAKRNTSNSNSLTNYYSKDSTQNQESEGQTAETYTQQSERNYDTGNRHYESKKHNNDNQTRSNSKTKSKDPEACRTFYNSSINKSSQDVRNGRGESSGRQRNWVGSQRLRTVDRNIVEDEQYANMYSQYKDERVERVTKSEKTASPARARNKPVSDSMGNTAMTQRERLTEQLDKGTLECLVCCERVKQTDSVWWCSNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNEEIPTEYRCMCGAVRSPDYSRGAVGAHTCGKACRRPRSCPHPCTLLCHPGPCPPCQATISKQCGCGFETRSVLCSSKLAQLCGRECKRKLSCGVHDCQRECHEGLCDDCTETVTQVCYCPASKSRSVPCTAETGTCDTWSCSAACARVLSCGAHVCRRACHPPPCAPCPLRPDNVHACPCGNTRIEKDQRKSCTDPIPLCGNICTKPLPCGPEGNKHFCKQLCHEGPCPTCLDNTLLPCRCGHSSRDVPCSDLPEMLNNILCQKKCNKKLSCGRHRCRTVCCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELRCECGAEVVLPPVRCGTRPPPCHAPCRRERPCSHPPHHSCHTGDCPPCVVLTTKMCHGKHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTEKCSQPCNEKRPSCGHVCAAPCHVAGGGVCPSSAPCRKPVRATCPCARRSAERTCHENARDYAKMMSALAATKMQEGGSVDISEVQRPGAMLKTLECDDECRMEARCRQLALALQIRNPDVSAKLAPRYSEHVRSTAVREPAFAQQVHDCLTELVQRAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPTATHTATTSTPTTSARSPGGWATLTSTNAWASRSQPRPTAEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157358; iTF_01155976; iTF_01158415; iTF_01160166; iTF_01154711;
90% Identity: -
80% Identity: -