Psmi030188.1
Basic Information
- Insect
- Parnassius smintheus
- Gene Symbol
- LRRFIP2_1
- Assembly
- GCA_036936625.1
- Location
- JAUPFT010000011.1:6784478-6789079[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-24 9e-20 73.5 1.2 137 268 21 161 16 180 0.83 2 3 2 9.2e+04 -5.9 17.3 1 48 181 227 181 245 0.74 3 3 0.29 1.3e+04 -2.6 5.2 19 231 231 252 217 260 0.38
Sequence Information
- Coding Sequence
- ATGGCTGGGTCGGAATTTTCCCTGGTagCTTCGTTGTTGCAATGTGCCCTGGCTATTGTTTTGCAGCGGGAACACAAAGAGAAGTGCTCGGCGCACGAGCGCCTGAAGCGCGAGCACGCGGCGCTGGAGCGCGAGGTGGCGTGCGCGCGGGACGCAGTGCGCGCGCGTGACGCGGCGGCGGCGTCCGCGGGCTTCGCCTTCGTGGACGCGGCCGCCGAGCCCGCACCCGCCGAGCTCGCGCCCGCCCGCACCGAACCACAGGGCTTCGGCAGCGTGCCGCCGCTCGCGCTCGTCTCGCACCACTCTGAGCAACTACTCAACGACGCCGGCGAGGGCACGCTGGATGTGCGGTTGCAGAAGTTGGTGAGTTCGAAGCAAGCCTTGGAGTCGGAGGTGCGCAAACTGAAACTTAGTCTCAACGAGGAGCGTGCCGCGCGACAAAATGGAGTCGCATCGCTACATGAGCGTGAACACGACAGCGAACTGGAATCTTTACGCAAATCTGTGGCGGAGGCGAAGGGGCGAGCTGCGCGGGCGGAGGCTGAGGCCGCGCTACAAGCGGCTGCCGTGGCGCGCCTCGAGGCGCAGGTGGCCCGCCTGCGAGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGACGTCTGCAGCGCGAGGCTAGAGAAGCACTGAATCGAGTTGAAGAATTGGAGACAGAGAACAGTCATCTGACGAAACGTCTTGATAAACTCAAGAACGCTAAATCTGCGCTCCTGAAAGAACTGTGA
- Protein Sequence
- MAGSEFSLVASLLQCALAIVLQREHKEKCSAHERLKREHAALEREVACARDAVRARDAAAASAGFAFVDAAAEPAPAELAPARTEPQGFGSVPPLALVSHHSEQLLNDAGEGTLDVRLQKLVSSKQALESEVRKLKLSLNEERAARQNGVASLHEREHDSELESLRKSVAEAKGRAARAEAEAALQAAAVARLEAQVARLRARQDHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01130045;
- 90% Identity
- -
- 80% Identity
- -