Basic Information

Insect: Parnassius smintheus
Gene Symbol: clz9
Assembly: GCA_036936625.1
Location: JAUPFT010000026.1:12449669-12458441[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-07 8.8e-05 24.4 0.0 3 36 196 230 194 237 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-07	8.8e-05	24.4	0.0	3	36	196	230	194	237	0.91

Sequence Information

Coding Sequence: ATGTCTCTATCTAATAAATCTTTTTTCTTAATTCTTTTATCAATTTTGGAAGTGATACCAATACAAATCGACCTACAAGAAGGAGaagagataaatgaaaataatgttcAAGTTTCTCAGTTGAATGAGTGCCTAAGTGTAAAGCGAGGTGCTGAAGTAGGAGTGTGTTTTAGTAAAGAGCTATTGGCTAATCTGAATCAATACGATGAAGCGGAATCCTTTAGTTTGGCCACCGGCGTTACGTTTATCAGAGATGAGAAAACGCCAAGGAATCTTGGAAATTTCCTTGACAAGGACCCTATGGATTTTAGATCCATAATGGAAGACGCAAGCGACCTTATCTCTAAGCGTTCATTACATTGGGATATGAGTACACTTTACCCTGGATTGGTAATGAGAATTGGTCCCACTTTAGCAAACGGTGTACTTGAGTTCGTGCTGGACCCAAGGATAAAAGACAGAACCTATCAGAACCATGGTGAAATAACGACagGAATATGCATAAAAATGCCACGAATATATATTAGAAAATTCAGGAGTACTAGGAATGGAAAGTCCTTCCTACCTTACACTAATTACAGCTCTGAAAATTTACAGAAAGCAATTCGAGACGTAAAAAGTAAGACTTTAACACTAGGAGAAGCATCATCTAAATATCAAATACCTAAAACAACGTTATCGAGAAAATGTAGAAACCTTAATTGCTCACAAGAAAAAGCAGGACGTCCTACCCTTTTTTCACCTGAAGAAGAGAAAGCCTTCATTAAACACATTGTAAATTTGGCAGACTGGGGATTCCCATTCGATCTTATTGATCTTCGTATTTTCGCGCAAAGGTACTTAAATAAACTCGGAAAAACAATATACGGAATACCCGAAAATTTGCCTGGTTTAGAATGGGCTCGAAACTTTTTAAGGCGTCATAAAGATTTGCTTTCGAACCGTATGGCTTCCAATATATCTACCGATAGAGCAAAGGTATCAGCATCGACGATAGACTCATTTTTTGAGTACTTTGCACCAACAATCGATGGTGTAACACCTGACCGAATCATAAACTATGATGAGACTAATTTAACTGACGACCcaggaaacaaaaaatacatttataaacgtggtgtaaaatacccagaaCGTGTAACAAATACATCGAAAACGGCTGTTTCCCTCATGTTTGCTGCTACAGCCGAAGGTCAGTTATTACCGGTTTACGTGGTGTACAAAGCAGAACACCTATGGGATACCTGGTTAGAAGGAGGTCCTCCAGACGCAATATACAATCGCTCTAAAAGCGGATGGTTCGACTCGGTTTGTTTCGAGAATTGGTTTGAAAAAGTGATCGTTCCATACGCTAAAAAAAAGCCTGGACGTAAAATTGTCATAGGTGACAATCTCTCATCACACTTTTCTGAAAACGTATTAAAAAAGTGTGAAAAGCTAAACATTTCATTTGTGTGCTTGCCCCCCAAATCAACGCACCTTCTGCAGCCGTTAGACGTTGCTCTGTATGGACCTTTAAAACATTATTGGCGAACTGTATTGACTGGGTGGAAAAAAGTAGAAGGACGCAAACATAAAACCCTAGTAAAAGATGTTTTTCCGAAACTGCTGGCCAAACTTATGAACAAACTTATGGAAAACAATACAGGGGGAAAAAACGTCATTGCAGGTTTTAACAAATGTGGGCTTTATCCAATCAACCCGGAACGACCGAAGTCACGGCTGCCACACAGTCATGACTTACTACCCGAGGAAATTGAAACAGCTGCTACTTCAGTTGTCATAGAACATCTAAAAGAAATGCGGGGGCTCTCGGCTTCAGATGAGCCCAGAAGACGTAAAAAACGATGTAATGTTCCAGCAGGCCGAGGCATCACAGCAAGAGACATCGAGCAAACGAAACCtaaaaaaccaaataaaatgaCGGATAATGAGTTTGTAAATAGTGAAGTTGAAGTTTCTTCATCTGACTCGTCTGAAATAATAGATATTTCAACATTTAATATTCTAGAGCCAGGTCCGTCCAAGTCAATAATCCAAACAAAAAGTACgcagaaaaataaaatgtatgaaaAAGAATCTAATATACATAAGAACACCAAGAAAGATAAAGGTATTGGAAAAAGTAGCAAAATTGGaaaagaaaataaagataagAACATGAAACGCAAAGAAAACGGGAAAAAGAAatgttttgaagaaaaaaaacatgataatgcactgaaacaaaataataaagataaaaagaaaaaaagaaattgcAGAAAAATTTCAACAGGCTCTACCACTTCTGAGTCACAAACCATAAGTATATATGAAGATTCTGATTGTATTGACGAAAACTTTGATATTGATGGAGATATGGATTTAAGAAATATGAATCGTTGTTCCTCGGGTCCAGTCACATTGACAGAAAATCAAGAGATAGTCCAATCTTCTGACAACATAGAATCAAAAACACACATGGAGTTAAGCACACTCGAAACTATAGAACAAATAATCCAAACTTCTGACAACATAGAACCAGGAATTACAAAGAAGGAGTTTAGAACAACCGAAAATatagaaaactttaaaataactACACCTTCAGACATAATAGAACCAGACATGACAACAAATAAAACAAGCTCAATCAGCATTCCAGAAAATCAAGGGATTGCTCAATATTGTAACAACAGTGAGAAAGAGACAACAACGACCAATGAGACTCAAGAAAACCGAGACACGAGTGAATTTTATGACAACAAAGAAGCAAAAGTTACTACGAAAGAGAAATTACCAACAGAAAGCACTGACAAGACTATATCGAACCAAGAGACAAAACTATCAGAAGAAGATATCAAGACCAATTTTAACAACAATGATTCAGAAAGTAGACACACAGAACAAGAAAAAGAATATGAATTGAATGACCACGTAATTGTAAGATACATCAACAAAAAGAAATGGAAATATTATATGGGTATCATAGAAAACATAAACATGGAAAATGAAGAACCTTATACTATTAGATTTTATAAAACAGCTAAAAAACCGTCGTTACGGTTCCTTTTGACACGAAAGCTTGACAGGGACATAGTTCCCTCTATATGTATTGTCAAGAAAGTCAATTTGATACAAAACCCAAATTATTCAAAGGAGTTCTTTCTGTCCTTGGCTGACGATGATGTCGTGGAATTATTTACGTAA
Protein Sequence: MSLSNKSFFLILLSILEVIPIQIDLQEGEEINENNVQVSQLNECLSVKRGAEVGVCFSKELLANLNQYDEAESFSLATGVTFIRDEKTPRNLGNFLDKDPMDFRSIMEDASDLISKRSLHWDMSTLYPGLVMRIGPTLANGVLEFVLDPRIKDRTYQNHGEITTGICIKMPRIYIRKFRSTRNGKSFLPYTNYSSENLQKAIRDVKSKTLTLGEASSKYQIPKTTLSRKCRNLNCSQEKAGRPTLFSPEEEKAFIKHIVNLADWGFPFDLIDLRIFAQRYLNKLGKTIYGIPENLPGLEWARNFLRRHKDLLSNRMASNISTDRAKVSASTIDSFFEYFAPTIDGVTPDRIINYDETNLTDDPGNKKYIYKRGVKYPERVTNTSKTAVSLMFAATAEGQLLPVYVVYKAEHLWDTWLEGGPPDAIYNRSKSGWFDSVCFENWFEKVIVPYAKKKPGRKIVIGDNLSSHFSENVLKKCEKLNISFVCLPPKSTHLLQPLDVALYGPLKHYWRTVLTGWKKVEGRKHKTLVKDVFPKLLAKLMNKLMENNTGGKNVIAGFNKCGLYPINPERPKSRLPHSHDLLPEEIETAATSVVIEHLKEMRGLSASDEPRRRKKRCNVPAGRGITARDIEQTKPKKPNKMTDNEFVNSEVEVSSSDSSEIIDISTFNILEPGPSKSIIQTKSTQKNKMYEKESNIHKNTKKDKGIGKSSKIGKENKDKNMKRKENGKKKCFEEKKHDNALKQNNKDKKKKRNCRKISTGSTTSESQTISIYEDSDCIDENFDIDGDMDLRNMNRCSSGPVTLTENQEIVQSSDNIESKTHMELSTLETIEQIIQTSDNIEPGITKKEFRTTENIENFKITTPSDIIEPDMTTNKTSSISIPENQGIAQYCNNSEKETTTTNETQENRDTSEFYDNKEAKVTTKEKLPTESTDKTISNQETKLSEEDIKTNFNNNDSESRHTEQEKEYELNDHVIVRYINKKKWKYYMGIIENINMENEEPYTIRFYKTAKKPSLRFLLTRKLDRDIVPSICIVKKVNLIQNPNYSKEFFLSLADDDVVELFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01156363; iTF_01158863; iTF_01158864; iTF_01158865; iTF_01158866; iTF_01158867; iTF_01158868; iTF_01156352; iTF_01156349; iTF_01156350;
90% Identity: iTF_01156349;
80% Identity: iTF_01158865; iTF_01158866; iTF_01158867; iTF_01158868;