Basic Information

Insect: Parnassius mnemosyne
Gene Symbol: clz9
Assembly: GCA_963668995.1
Location: CAVLGL010000115.1:12834916-12837600[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.3e-07 7.8e-05 24.3 0.0 3 35 27 60 25 65 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.3e-07	7.8e-05	24.3	0.0	3	35	27	60	25	65	0.92

Sequence Information

Coding Sequence: ATGCCACgaatatatattagaaaattcAGGAATACTAGGAATGGAAAGTCCTTCCTACCTTACACTAATTACAGCTCTGAAAATTTACAGAAAGCAATTCGAGACGTAAAAAGTAAGACTTTAACACTAGGAGAAGCATCATCTAAATATCAAATACCTAAAACAACGTTATCGAGAAAATGTAGAGACCTTAATTGCTCACAAGAAAAAGCAGGACGTCCTACCCTTTTTTCACCTGAAGAAGAGAAAGCCTTCATTAAACACATTGTAAATTTGGCAGACTGGGGATTCCCATTCGATCTTATTGATCTTCGTATTTTCGCGCAAAGGTACTTAAATAAACTCGGAAAAACAATATACGGACTACCCGAAAATTTGCCTGGTTCAGAATGGGCTCGAAACTTTTTAAGGCGTCATAAAGATTTGCTTTCGAACCGTATGGCTTCCAATATATCTACCGATAGAGCAAAGGTATCAGCATCGACGATAGACTCATTTTTTGAGTATTTTGCACCAACAATCGATGGTGTAACACCTGACCGAATCATAAACTATGATGAGACTAATTTAACTGACGACCCAGgaaacaaaaaatacatttataaacgtggtgtaaaatacccagaaCGGGTAACAAATACATCGAAAACGGCTGTTTCCCTAATGTTTGCTGCTACAGCCGAAGGTCAGTTATTACCGGTTTACGTGGTGTACAAAGCAGAACACCTATGGGATACCTGGTTAGAAGGAGGTCCTCCAGACGCAATATACAATCGCTCTAAAAGCGGATGGTTCGACTCGGTTTGTTTCGAGAATTGGTTTGAAAAAGTGATCGTTCCATACACTAAAAAAAAGCCTGGACGTAAAATTGTCATAGGTGACAATCTCTCTTCACACTTTTCTGAAAACGTATTAAAAAAGTGTGAAAAGCTAAACATTTCATTTGTGTGCTTGCCCCCCAAATCAACACACCTTCTGCAGCCGTTAGACGTTGCTCTGTATGGACCTTTAAAACATTATTGGCGAACTATATTGACTGGGTGGAAAAAAGTAGAAGGACGCAAACATAAAACCCTAGTAAAAGATGTTTTTCCGAAACTGCTGGCCAAACTTATGAACAAACTTATGGAAACCAACACAGGGGGAAAAAACGTCATTGCAGGTTTTAACAAATGTGGGCTTTATCCAATCAACCCGGAACGACCGAAGTCACGACTGCCACACAGTCATGACTTACTACCCGAGGAAATTGAAACAGCTGCTACTTCAGTTGTCATAGAACATCTAAAAGAAATGCGGGGGCTCTCGGCTTCAGATGAGCCCAGAAGACGTAAAAAACGATGTAATGTTCCAGCAGGCCGAGGCATCACAGCACGAGACATTGAGCAAACGAAACctaaaaaaccaaataaaatgaCAGATAATGAGTTTGTAAATAGTGAAGTAGAAGTTTCTTCATCTGACTCGTCTGAAATAATAGATATTTCAACATTTAATATTCTAGAGCCAGGTCCGTCCAAGTCAATAATCCAAACAAAAAGTACgcagaaaaataaaatgtatgaaaaagAATCTAATATACATAAGAACACCAAGAAAGGTAAAGGTATTgtaaaaagtagcaaaattggaAAAGAAAATCAAGATAAGAACATGAAACGCAAAGAAAACGGGAAAAAGAAATGTTTTGAAGAAAATAACCATGATAATGCactgaaacaaaataataaagataaaaagaaaaaaagaaattgcAGAAAAATTTCAACATGCTCTACTACTTCAGAGTCACAAACCATAAGTATATATGAAGATTCTGATTGTATTGACGAAAACTTTGACATTGATAGAGATATGGATTTAAGAAATATGAATCGTTGTTCCTCGGGTCCAGTCACATTGACAGAAAATCAAGAGATAGTCCAATCTTCTGACAACATAGAATCAAAAACACACAAGGAGTTAAGCACACTCGAATCTATAGAACATATAATCCAAACTTCTGACAACATAGAACCAGGAATTACAAAGAAGGAGTTTAGAACAACCGAAAATATAGAAAACTTTAAAATAACTACACCTTCTGACATAATAGAACCAGAcatgaaaacaaataaaacaagctCAATCAGCATTCCAGCAAATCAAGGGATTGCTCAATATTGTAACAGCAGAGAGAAAGAGACATCAACGACCAATGAGACTCAAGAAAACCGAGATACGAGTGAATTTTATGATAAGAAAGAAGCAAAAGTTACTACGAAAGAGAAATTACCAACAGAAAGCACTGACAAGACTATATCGAACCAAGAGACAAAACTATCAGAAGAAGATATCAAGACCAATTTTAACAACAATGATTCAGAAGGTAGAAACACAGAACAAGAAAAAGAATATGAATTGAATGACCACGTAATTGTAAGATACATcaacaaaaagaaatggaaatatTATATAGGTATCATAGAAAACATAAACATGGAAAATGAAGAACCTTATACTattagattttataaaacaactaaaAAACCGTCGTTACGGTTCCTTTTGACACGAAAGCTTGACAGGGACATAGTTCCCTCTATATGTATTGTCAAGAAAGTCAATTTGATACAAAACCCAAATTATTCAAAGGAGTTCTTTCTGTCCTTGGCTGACGATGATGTCGTGGAATTATTTACGTAA
Protein Sequence: MPRIYIRKFRNTRNGKSFLPYTNYSSENLQKAIRDVKSKTLTLGEASSKYQIPKTTLSRKCRDLNCSQEKAGRPTLFSPEEEKAFIKHIVNLADWGFPFDLIDLRIFAQRYLNKLGKTIYGLPENLPGSEWARNFLRRHKDLLSNRMASNISTDRAKVSASTIDSFFEYFAPTIDGVTPDRIINYDETNLTDDPGNKKYIYKRGVKYPERVTNTSKTAVSLMFAATAEGQLLPVYVVYKAEHLWDTWLEGGPPDAIYNRSKSGWFDSVCFENWFEKVIVPYTKKKPGRKIVIGDNLSSHFSENVLKKCEKLNISFVCLPPKSTHLLQPLDVALYGPLKHYWRTILTGWKKVEGRKHKTLVKDVFPKLLAKLMNKLMETNTGGKNVIAGFNKCGLYPINPERPKSRLPHSHDLLPEEIETAATSVVIEHLKEMRGLSASDEPRRRKKRCNVPAGRGITARDIEQTKPKKPNKMTDNEFVNSEVEVSSSDSSEIIDISTFNILEPGPSKSIIQTKSTQKNKMYEKESNIHKNTKKGKGIVKSSKIGKENQDKNMKRKENGKKKCFEENNHDNALKQNNKDKKKKRNCRKISTCSTTSESQTISIYEDSDCIDENFDIDRDMDLRNMNRCSSGPVTLTENQEIVQSSDNIESKTHKELSTLESIEHIIQTSDNIEPGITKKEFRTTENIENFKITTPSDIIEPDMKTNKTSSISIPANQGIAQYCNSREKETSTTNETQENRDTSEFYDKKEAKVTTKEKLPTESTDKTISNQETKLSEEDIKTNFNNNDSEGRNTEQEKEYELNDHVIVRYINKKKWKYYIGIIENINMENEEPYTIRFYKTTKKPSLRFLLTRKLDRDIVPSICIVKKVNLIQNPNYSKEFFLSLADDDVVELFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01158872;
90% Identity: iTF_01156349;
80% Identity: -