Pmne063329.1
Basic Information
- Insect
- Parnassius mnemosyne
- Gene Symbol
- TIGD6
- Assembly
- GCA_963668995.1
- Location
- CAVLGL010000148.1:39163332-39165347[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-08 8.2e-06 27.4 0.1 1 43 17 59 17 60 0.93
Sequence Information
- Coding Sequence
- atgccAAATAAATACCAAAGAAAAGCATGCAGCTCACGAGGGAACTGGAGTGAAGAGTCACTTAAGACGGCCATGGATGCTGTTAAAAAAGGTGAAATGACTATCTACGCAGCTTCAATAACCTATCAAGTACCAAGGAAGACCCTCGAAAGGCGATACAAGAAAAATAATGACAAAAAAGGACCAATGGGACCATCCTCTATATTTGGCGAAAAAAATGAGAAGAAACTCGCTAACCATATTATAACTATGCAAAAAAATGGTTTCCCATTGACTATTGATGATGTCAGAAAGATTGCGTACCAGTTCGCGGAGCAATTGAATTTGAATCACAGATTTAATAGAGAAACTGAGAAAGCAGGATATGACTGGTTGCAAGGTTTTTTACGAAGAAACCACGATATTACATTAAGAAAGTCAGAAGGAGTATCTTTAGCTAGATCAACTGCTATGAATAAACTGGAGGTTGACGCTTACTTTGAGCTTCTTGAAAGCATATTGACAGTAGACGATGGTGTGTTGAAACCGAGTTGTATCTTCAACATGGACGAGACTGgtcttcagcttaataatcgacCAGGGCATGTTCTAGCTGAAAAGGGTTCTAAGGCTGTATCTACAGTTACTTCGACTGAAAAGGGAGAAACGATTACAGTTATAGCCTGCTGCAATGCTGAAGGTACATTTTTACCACCTGCCTGTATCATGAAAGGCAAAAACAAAAAACCTGAGTTTGAGGATGGGATGCCACCGGGATCGAAACTTTTCATGTCCCCAAAATCAGCGTACATTACCTCAGATTTATTTATTGAATGGTTGAAAACACATTTTGTTCCGAGGAAACCAGCTGGAAGAGTACTTCTTTTACTAGATGGTCATTCAACTCACTGTAATTCTGTGGAAATGCTGGAATATGCAAATGACAATGACATCAACTTACTTTCAATGCCAAGCCACACGTCTCACTACCTCCAACCACTAGATCGTACGGTGTTTAAATCACTGAAGACTCATTTTTACGAGCAGTGTCGACTTTGGCTAAAACAAAATCCTGGTCGTCGTATAACACGATTATCATTTGGAAGATTGCTTAATAAGGCGTGGGGAAAGGCAGCTTCTGCAGAGAATGCAATTGCGGGTTTTAAAGCTACAGGTGTCCACCCCTTCAACCCATCTGCAATTCCCGACTACGCGTTTACCCAAGAATTGACACAGCAAGTGTCTAAATCTCAAAATGAGTGTACAGCCACTGTTATGGTCGAAGAGCAAGAAGAAAATACTAGTAACATAGCTTCTGCTAATCTGGAACCAGTTCCAAATACTTTCGAAGTGCGACAAGACATATCACTTGCAATCGCTGAGCCAAATAGCTCTGTTGAGCGAATAGTTTTAAACGCAAGTCCTGAGATGATTACAAGAAGGCCTAAAAAATTATTTGCTACTGCTTCAGcagcagtaattaaaaaaatgtcagaACAATTCCCTCCAAGAAGCGATTTGCCAGATCAGACTCCAACACGTATTTTAAAGCAAATATCGCCAGTTccacaaaaaattattgaagtaCGCAAACGTGCTAAACAGGTAGGCATGCTTTTAACCTCAGAGAATCACATCAAAACAAGAAAATTTAAGGAAGCGCTTAAAAAAAATAGGGAACAAAAAAATTTCGAAAAAGACgttaaaaaggaaagaaaaattgAGATAAAACCAATAAAACGAGCACCAAGAAAGAGAAAATCATTAAGAAAGTTATCTGAAAGTAGTGATGAGGATGAAGAACTAATATTATGTAATTCGTCTGACGAAGAAGATGGAAACAGAGAATTGGATAACTGTGTAGGTTGTGGAGAAAATTATTACGAAACGCAACTCATCGAAGATTGGATTCAATGCGTTATATGCCAACTGTGGGTACATGAAAATTGCACCGAATTCGATGATAAGTGTTCATCATGTGGACAGAAAAAGAAGAATGAGCTGAGGCTCAAAAACTTAAAGGGAAAAAGTGATTAA
- Protein Sequence
- MPNKYQRKACSSRGNWSEESLKTAMDAVKKGEMTIYAASITYQVPRKTLERRYKKNNDKKGPMGPSSIFGEKNEKKLANHIITMQKNGFPLTIDDVRKIAYQFAEQLNLNHRFNRETEKAGYDWLQGFLRRNHDITLRKSEGVSLARSTAMNKLEVDAYFELLESILTVDDGVLKPSCIFNMDETGLQLNNRPGHVLAEKGSKAVSTVTSTEKGETITVIACCNAEGTFLPPACIMKGKNKKPEFEDGMPPGSKLFMSPKSAYITSDLFIEWLKTHFVPRKPAGRVLLLLDGHSTHCNSVEMLEYANDNDINLLSMPSHTSHYLQPLDRTVFKSLKTHFYEQCRLWLKQNPGRRITRLSFGRLLNKAWGKAASAENAIAGFKATGVHPFNPSAIPDYAFTQELTQQVSKSQNECTATVMVEEQEENTSNIASANLEPVPNTFEVRQDISLAIAEPNSSVERIVLNASPEMITRRPKKLFATASAAVIKKMSEQFPPRSDLPDQTPTRILKQISPVPQKIIEVRKRAKQVGMLLTSENHIKTRKFKEALKKNREQKNFEKDVKKERKIEIKPIKRAPRKRKSLRKLSESSDEDEELILCNSSDEEDGNRELDNCVGCGENYYETQLIEDWIQCVICQLWVHENCTEFDDKCSSCGQKKKNELRLKNLKGKSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01155042; iTF_01156269; iTF_01156271; iTF_01156338; iTF_01158770; iTF_01158771; iTF_01156275; iTF_01156286;
- 90% Identity
- iTF_01156275;
- 80% Identity
- -