Basic Information

Insect: Parnassius mnemosyne
Gene Symbol: TIGD6
Assembly: GCA_963668995.1
Location: CAVLGL010000092.1:27125772-27127787[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.1e-08 3e-05 25.6 0.1 1 43 17 59 17 60 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.1e-08	3e-05	25.6	0.1	1	43	17	59	17	60	0.93

Sequence Information

Coding Sequence: atgccAAATAAATACCAAAGAAAAGCATGCAGCTCACGAGGGAACTGGAGTGAAGAGTCACTTAAGGCGGCCATGGATGGTGTTAAAAAAGGTGAAATGACTATCTACGCAGCTTCAATAACCTATCAAGTACCAAGGAAGACCCTCGAAAGACGATACAAGAAAAATAATGACAAAAAAGGACCAATGGGACCATCCTCTATATTCGGCGAAAAAAATGAGAAGAAACTCGCTAACCATATTAAAACTATGCAAAAACATGGTTTCCCATTGACTATTGATGACGTCAGAAAGATTGCGTACCAGTTCGCGGAGCAATTGAATTTGAATCACAGATTTAATAGAGAAACTGAGAAAGCAGGATATGACTGGTTGCAAGGTTTTTTACGAAGAAACCACGATATTACATTAAGAAAGTCAGAAGGAGTATCTTTAGCTAGATCAACTGCTATGAATAAACTGGAGGTTGACGCTTACTTTGAGCTTCTTGAAAGCATATTGACAGTAGACGATGGTGTGTTGAAACCGAGTTGTATCTTCAACATGGACGAGACTGgtcttcagcttaataatcgacCAGGGCATGTTCTAGCTGAAAAGGGTTCTAAGGCTGTATCTACAGTTACTTCGACTGAAAAGGGAGAAACGATTACAGTTATAGCCTGCTGCAATGCTGAAGGTACATTTTTACCACCTGCCTGTATCATGAAAGGCAAAAACAAAAAACCTGAGTTTGAGGATGGGATGCCACCGGGATCGAAACTTTTCATGTCCCCAAAATCAGCGTACATTACCTCAGATTTATTTATTGAATGGTTGAAAACACATTTTGTTCCGAGGAAACCAGCTGGAAGAGTACTTCTTTTACTAGATGGTCATTCAACTCACTGTAATTCTGTGGAAATGCTGGAATATGCAAATGACAATGACATCAACTTACTTTCAATGCCAAGCCACACGTCTCACTACCTCCAACCACTAGATCGTACGGTGTTTAAATCACTGAAGACTCATTTTTACGAGCAGTGTCGACTTTGGCTAAAACAAAATCCTGGTCGTCGTATAACACGATTATCATTTGGAAGATTGCTTAATAAGGCGTGGGGAAAGGCAGCTTCTGCAGAGAATGCAATTGCGGGTTTTAAAGCTACAGGTGTCCACCCCTTCAATCCATCTGCAATTCCCGACTACGCGTTTACCCAAGAATTGACACAGCAAGTGTCTAAATCTCAAAATGAGTGTACAGCCACTGTTATGGTCGAGGAGCAAGAAGAAAATACTAGTAACATAGCTTCTGCTAATCTGGAACCAGTTCCAAATACTTTCGAAGTGCGACAAGACATATCACTTGCAATCGCTGAGCCAAATAGCTCTGTTGAGCGAATAGTTTTAAACGCAAGTCCTGAGATGATTACAAGAAGGCCTAAAAAATTATTTGCTACTGCTTCAGcagcagtaattaaaaaaatgtcagaACAATTCCCTCCAAGAAGCGATTTGTCAGATCAGACTCCAACACGTATTTTAAAGCAAATATCGCCAGTTccacaaaaaattattgaagtaCGCAAACGTGCTAAACAGGTAGGCATGCTTTTAACCTCAGAGAATCACATCAAAACAAGAAAATTTAAGGGAGCGCTTAAAAAAAGTAGGGAACAAAAAAATTTCGAAAAAGACgttaaaaaggaaagaaaaattgAGATAAAACCAATAAAACGAGCACCAAGAAAGAGAAAATCATTAAGAAAGTTATCTGAAAGTAGTGATGAGGATGAAGAACTAATATTATGTAATTCGTCTGACGAAGAAGATGGAAACAGAGAATTGGATAACTGTGTAGGTTGTGGAGAAAATTATTACGAAACGCAACTCATCGAAGATTGGATTCAATGCGTTATATGCCAACTGTGGGTATATGAAAATTGCACCGAATTCGATGATAAGTGTTCATCATGTGGACAGAAAAAGAAGAATGAGCTGAGGCTCAAAAACTTAAAGGGAAAAAGTGATTAA
Protein Sequence: MPNKYQRKACSSRGNWSEESLKAAMDGVKKGEMTIYAASITYQVPRKTLERRYKKNNDKKGPMGPSSIFGEKNEKKLANHIKTMQKHGFPLTIDDVRKIAYQFAEQLNLNHRFNRETEKAGYDWLQGFLRRNHDITLRKSEGVSLARSTAMNKLEVDAYFELLESILTVDDGVLKPSCIFNMDETGLQLNNRPGHVLAEKGSKAVSTVTSTEKGETITVIACCNAEGTFLPPACIMKGKNKKPEFEDGMPPGSKLFMSPKSAYITSDLFIEWLKTHFVPRKPAGRVLLLLDGHSTHCNSVEMLEYANDNDINLLSMPSHTSHYLQPLDRTVFKSLKTHFYEQCRLWLKQNPGRRITRLSFGRLLNKAWGKAASAENAIAGFKATGVHPFNPSAIPDYAFTQELTQQVSKSQNECTATVMVEEQEENTSNIASANLEPVPNTFEVRQDISLAIAEPNSSVERIVLNASPEMITRRPKKLFATASAAVIKKMSEQFPPRSDLSDQTPTRILKQISPVPQKIIEVRKRAKQVGMLLTSENHIKTRKFKGALKKSREQKNFEKDVKKERKIEIKPIKRAPRKRKSLRKLSESSDEDEELILCNSSDEEDGNRELDNCVGCGENYYETQLIEDWIQCVICQLWVYENCTEFDDKCSSCGQKKKNELRLKNLKGKSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01156297;
90% Identity: iTF_01156275;
80% Identity: -