Pgla017787.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000008.1:24379996-24414787[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-11 3.2e-09 38.2 0.0 1 43 107 150 107 152 0.92 2 2 8e-18 2.5e-15 57.8 0.0 1 43 313 356 313 358 0.95
Sequence Information
- Coding Sequence
- ATGCTGGCAGCGTTGGCGGCGCTGGGCAGCGGGTTGGTGCCGCCGCCGCTGCCGCAGGCCTGGCTCATACAGCGACTGGCGCAGACGAGACAACATCCCGACAGCATATGTTTTGTTAGCAGATTACCCGAGGCGTGTGACAAGGCCCCAGCGGCGAGCGCGTCCCCCACGCTGACCGAGCAGCCCCTCGACCTCAGCGCCAAGTCCACTTCCAGCACCAGCGGCACCCCGCCCCCAGAACACAACAACTTGGACAACTCCAGATTAAAACGGGCAGGCCTAGACAGTGCTAGCAATAGTACAACGAGGAGAACTTACACCGATGACGAACTCCAATCGGCCCTCCGAGATATCCAGTCGGGACGCCTCGGCACTAGAAGAGCCGCTGCGATCTATAGAATACCGCGCTCCACTCTCAGGAATAAAATCAACAAGTGCGGCATTACAGCCGAGCAAGGTCACGAGTCTGAACCTGATAGCGACCCCGAAAGAACCGACTCTCCACCGTCAGTCATTCTAAAAATACCAACGTTCCCACCACCGGAAGACAAAAGCCCTTCCCCAGCCACGCCAGTAACCCCAATAACACCGATCATCCCACCTCCTCAGCCGCCATTAAACCCACCTTCTCAGCTTCTCCTTCCCGCATCAGTTTTTGCCGACCCGCCATCTTCTCAACATCTATTCACGTCTTTGAGCGATGTCATAGCTAAAAGCATCAGTCAAAAATTCCAGCAGCCTCTAGAAAGGCCGCCGCAACCCGATTTGCCCTTCATGAGGGCGCCAGATAGGCACGTGTCGGTGATCAAAACACCGCCAGAAAATCAAAGGAATTACGCAGCGCCAAGCAACTCTAGAGCGACCACGAACAACAATGGTCAACCTGCTACTGGTGGGAAGGGGACACGACCCAAGCGTGGAAAATACAGAAACTATGACAGGGATAGCTTAGTGGAGGCTGTGAAAGCGGTGCAGAGAGGAGAGATGTCCGTGCACAGAGCGGGGTCGTACTACGGAGTGCCCCACTCGACGCTAGAGTATAAAGTGAAGGAACGGCATCTGATGCGGCCTAGAAAACGAGAACCGAAACCGCAACCGGAAGCTAAGCCGCAACCGAAGCCACCGCCACCCAAGCCACCTACGAAACCCTTCACGAACGGCCTCAACGGGCCGGAAACACCGGGGTATCCAACAGGTTATCCATTTTGGCCGGGGGGTTTCGCTCCGCCGCCGGCCCCGGATTTATACGCGTCCCACATGATGCGACGATTGCGCGACGAAGCACCGCCGGCGAACGGGTCCTTTCTCGAGGGGATCATCAGATCGAGTTTGGAGCGACAGCCGGCGCTCTTGCAGCGGCTTACCGAACCCCGAGCGCCAATAGCACCGACAGGCGAAGCGCCCAGTTTGCTGCGGCGGCTGGCGGGCGAGCCGGACGATTCCCCGCCGGCGAGACGTCCCCGCATAGACAGCTCGGATCGTCAGCTGGCCGCTGAGATGCGCGAAGCGGTCCAGAGACTACGGGCGGACAAGATGCGGCCGAGGAACGGCACCCCGACGCCGCCCGGCGGCTGCtcgccgcccgcgcccgcgcccgcgccgcccgaCCGCGTGTAG
- Protein Sequence
- MLAALAALGSGLVPPPLPQAWLIQRLAQTRQHPDSICFVSRLPEACDKAPAASASPTLTEQPLDLSAKSTSSTSGTPPPEHNNLDNSRLKRAGLDSASNSTTRRTYTDDELQSALRDIQSGRLGTRRAAAIYRIPRSTLRNKINKCGITAEQGHESEPDSDPERTDSPPSVILKIPTFPPPEDKSPSPATPVTPITPIIPPPQPPLNPPSQLLLPASVFADPPSSQHLFTSLSDVIAKSISQKFQQPLERPPQPDLPFMRAPDRHVSVIKTPPENQRNYAAPSNSRATTNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPEAKPQPKPPPPKPPTKPFTNGLNGPETPGYPTGYPFWPGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERQPALLQRLTEPRAPIAPTGEAPSLLRRLAGEPDDSPPARRPRIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPGGCSPPAPAPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00204289; iTF_01494241; iTF_01495705; iTF_01157576; iTF_01156198; iTF_01153769; iTF_01158610; iTF_01564500; iTF_00922807; iTF_00195100; iTF_00855804; iTF_01337692;
- 90% Identity
- iTF_00204289;
- 80% Identity
- -