Pmne041556.1
Basic Information
- Insect
- Parnassius mnemosyne
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963668995.1
- Location
- CAVLGL010000090.1:27717197-27786441[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-11 4.8e-09 37.7 0.0 1 43 267 310 267 312 0.92 2 2 1.1e-17 3.6e-15 57.3 0.0 1 43 473 516 473 518 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGAAGAAAATGGAAACTATACCAGGACGCGTTAATACCAAGAAGGAGCGACGGGGAACAGTCCAGCGACGAGGATACCACGCCTGTCACCGACCCCCCGCCCGCTCTCAAAATAAAGACGATAGAGGAGATCAACGCGCCGGACGAAGCGAAAGAGATCAAAGTCGAGGAGAACAAAGCCGCCCCGGAGAAGCCGAATCGGCCGGAGACGATATTAGAGAGTCTCATCAAGCGGCCGGCGACGCAACCGAAACTGGAGATACCAGAGGAGCCGACCGATTGGAAACCGGCCGACAAGTGCTACTTCTGCGTGGACGGGGCTGAAGCTGCTGGGGTGGAGGTCTCAGCGGCGGCTACGAGTCCAGCGTCGGAGTCGGACAGCAGCTCGGTGTCAGGGGCGAAGAGCCCCGCGGGCGCACCGCCCCTGCTGCAGCAAATGCTGCAGCTGCAACTACAGGCCCAAAGTCCACAGGCCATTGCACAGTTCCAGCAGATGCTGGCAGCGTTGGCGGCGCTGGGCAGCGGGCTGGTGCCGCCGCCGCTGCCGCAGGCCTGGCTCATACAGCGACTGGCGCAGACGAGACAACATCCCGACAGATTACCCGAGGCGTGTGACAAGGCCCCGGCGGCGAGCGCGTCCCCCACGCTGACCGAGCAGCCCCTCGACCTCAGCGCCAAGTCCACTTCCAGCACCAGCGGCACCCCGCCCCCAGAACACAACAACTTGGACAACTCCAGATTAAAACGGGCAGGCCTAGACAGTGCTAGCAATAGTACAACGAGGAGAACTTACACCGATGACGAACTCCAATCGGCCCTCCGAGATATCCAGTCGGGACGCCTCGGCACTAGAAGAGCCGCTGCGATCTATAGAATACCGCGCTCCACTCTCAGGAATAAAATCAACAAGTGCGGCATTACAGCCGAGCAAGGCCACGAGTCTGAACCTGATAGCGACCCCGAAAGAACCGACTCTCCACCGTCAGTCATACTAAAAATACCAACGTTCCCACCACCGGAAGACAAAAGCCCTTCCCCAGCCACGCCAGTAACCCCAATAACACCGATCATCCCACCTCCTCAGCCGCCATTAAATCCACCTTCTCAGCTTCTCCTTCCCGCATCAGTTTTTGCTGACCCGCCATCTTCTCAACATCTATTCACGTCTCTGAGCGATGTCATAGCTAAGAGCATCAGTCAAAAATTCCAGCAGCCTCTAGAGAGGCCGCCGCAACCCGATTTGCCCTTCATGAGGGCGCCAGATAGGCATGTGTCGGTGATCAAAACACCGCCAGAAAATCAAAGGAATTACGCAGCGCCAAGCAACTCTAGAGCGACCACGAACAACAATGGCCAACCTGCTACTGGCGGGAAGGGGACACGACCCAAGCGTGGAAAATACAGAAACTACGACAGGGATAGCTTAGTGGAGGCTGTGAAAGCGGTGCAAAGAGGAGAGATGTCCGTGCACAGAGCGGGCTCGTACTACGGAGTGCCTCACTCGACGCTAGAGTATAAAGTAAAGGAACGGCATCTGATGCGGCCGAGAAAACGCGAACCGAAGCCACAGCCGGAAGCTAAGCCGCAACCGAAGCCACCGCCACCCAAGCCACCTACGAAACCCTTCACAAACGGCCTCAACGGGCCGGAGACACCGGGGTATCCAACAGGTTATCCATTTTGGCCAGGGGGTTTCGCTCCGCCGCCGGCCCCGGATTTATACGCGTCCCACATGATGCGACGATTGCGCGACGAAGCACCGCCGGCGAACGGGTCCTTTCTCGAGGGGATCATCAGATCGAGTTTGGAGCGACAGCCGGCGCTCTTGCAGCGACTTACCGAGCCCCGAGCGCCAATAGCACCGACAGGCGAAGCGCCTAGTTTGCTGCGGAGGCTGGCGGGCGAGCCGGACGATTCCCCGCCGGCGAGACGTCCCCGCATAGACAGTTCGGATCGGCAGCTGGCCGCTGAGATGCGCGAAGCGGTCCAGAGACTACGGGCGGACAAGATGCGGCCGAGGAACGGCACCCCGACGCCGCCCGGCGGCTGCTCGccccccgcgcccgcgcccgcgccgcccgaCCGCGTGTAG
- Protein Sequence
- MGRRKWKLYQDALIPRRSDGEQSSDEDTTPVTDPPPALKIKTIEEINAPDEAKEIKVEENKAAPEKPNRPETILESLIKRPATQPKLEIPEEPTDWKPADKCYFCVDGAEAAGVEVSAAATSPASESDSSSVSGAKSPAGAPPLLQQMLQLQLQAQSPQAIAQFQQMLAALAALGSGLVPPPLPQAWLIQRLAQTRQHPDRLPEACDKAPAASASPTLTEQPLDLSAKSTSSTSGTPPPEHNNLDNSRLKRAGLDSASNSTTRRTYTDDELQSALRDIQSGRLGTRRAAAIYRIPRSTLRNKINKCGITAEQGHESEPDSDPERTDSPPSVILKIPTFPPPEDKSPSPATPVTPITPIIPPPQPPLNPPSQLLLPASVFADPPSSQHLFTSLSDVIAKSISQKFQQPLERPPQPDLPFMRAPDRHVSVIKTPPENQRNYAAPSNSRATTNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPEAKPQPKPPPPKPPTKPFTNGLNGPETPGYPTGYPFWPGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERQPALLQRLTEPRAPIAPTGEAPSLLRRLAGEPDDSPPARRPRIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPGGCSPPAPAPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154931;
- 90% Identity
- iTF_00957879;
- 80% Identity
- -