Btha013899.2
Basic Information
- Insect
- Bhutanitis thaidina
- Gene Symbol
- Mblk-1
- Assembly
- GCA_029286595.1
- Location
- JAGSMS010000026.1:8369102-8401084[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-12 2e-09 37.2 0.0 1 40 203 243 203 248 0.90 2 2 5.4e-19 9.2e-16 57.5 0.0 1 43 409 452 409 454 0.95
Sequence Information
- Coding Sequence
- ATGGCcAGTCCAGCGTCGGAGTCGGACAGCAGCTCGGTGTCCGGGGCGAAGAGCCCCGCCGGCGCCCCGCCATTGCTGCAGCAGATGTTGCAGCTTCAACTGCAGGCGCAGAGTCCGCAGGCCATTGCCCAGGCGTACACGGATTGGTGTGTGCAGTTCCAGCAGATGCTGGCGGCGTTGGCGGCGCTGGGCGGCGGGCTAGTGCCGCCTCCTCTGCCACAGGCCTGGCTCATACAGCGGCTCGCGCAGACGCGACACCACCCCGACAGGtatGCGTACACGGATTGGTGTGTGCAGTTCCAGCAGATGCTGGCGGCGTTGGCGGCGCTGGGCGGCGGGCCAGTGCCGCCTCCTCTGCCACAGGCCTGGCTCATACAGCGGCTCGCGCAGACGCGACACCACCCCGACAGACTGGCCGAGGCGTGTGACAAGGCCCCGGCAGCGAGCGCGTCCCCGACGCTCACCGAGCAGCCGCTAGACCTCAGCGCCAAGTCCACGTCCAGCACCAGCGGCACGCCCCCGCCGGAACACAACAACTTGGACCATTCCAGATTAAAACGGACAGTTCTGGACAGTGGCGGCAACAGCGCGACCCGGCGGACCTACACCGATGACGAACTCCAATCGGCCCTCAGGGACATCCAGTCGGGCCGCCTCGGCACCCGGAGAGCAGCCGCAATCTACAGAATACCGCGCTCAACTCTTCGGAACAAGATCAACAAGTTCGGAATTGCGACCGAGCAAAGCCACGAGTCCGAACCCGACAGCGACCCCGAAAGGACCGACTCGCCTCCGTCGGTCATACTAAAAATACCAACATTCCCACCACCGGACGACAAAAGCTCTTCGCCAGCCACGCCGGTAACCCCAGTAACGCCGATCATTCCACCTCCTCAGCCACCATTAAACCCACCGTCTCAGCTACTTCTGCCAGCCTCAGTCTTCGCCGACCCCCCATCTACTCAACATCTTTTTACATCTTTGAGTGACGTCATTGCTAAAAGTATCAGCCAGAAATTCCAGCAGCCTCTGGAAAGGCCGTCGCAAGCCGATTTACCCTTCATGAGAGCCCCGGACAGACACGTGTCAGTTATAAAAACACCACCAGATAATCAGAGGAACTACGCAGCACCGAGCAACTCTAGAGCACCCACGAACAACAACGGCCAACCAGCTATCGGTGGAAAGGGGACTCGACCCAAGCGAGGGAAGTACAGGAACTACGACAGGGACAGTTTAGTGGAGGCGGTGAAAGCGGTGCAAAGAGGAGAAATGTCGGTGCACAGAGCGGGGTCGTATTACGGAGTGCCGCACTCCACGCTAGAGTATAAAGTGAAGGAACGGCATCTAATGCGGCCGAGGAAACGCGAGCCAAAGCCGCAGCAGGAGACGAAGCCGCAACCGAAGCCGCCGCCGCCGAAACCTGCCACGAAACCCTTCACGAACGGTCTCAACGGGCCGGAGACGCCCGGGTATCCGTCGGGCTACCCGTTTTGGCCGGGTGGCTTCGCACCGCCGCCGGCGCCGGACCTTTACGCTTCGCATATGATGCGGAGGTTGCGCGACGAAGCGCCACCGGCGAACGGATCCTTCCTCGAGGGGATCATCAGATCCAGTTTGGAGAGACAGCCCGCGTTGTTGCAGCGGCTCACGGAGCCCCGGGTACCGATAGCGACAACGGGCGAAGCGCCCAGCTTGCTGCGGAGGCTAGCGGGTGAGCCCGATGACTCCCCGCCGGCGCGACGCCCGCGTATAGACAGTTCGGATCACCAGCTGGCCGCCGAGATGCGCGAAGCAGTCCAGAGACTGCGGGCTGATAAGATGCGCCCGCGCAACGGCACGCCCACGCCCCCGGGCGGCGGCTCGCCCCACGCGCCCaccgcgcccgccgcgcccccCGCGCCCCCCGACCGCGTGTAG
- Protein Sequence
- MASPASESDSSSVSGAKSPAGAPPLLQQMLQLQLQAQSPQAIAQAYTDWCVQFQQMLAALAALGGGLVPPPLPQAWLIQRLAQTRHHPDRYAYTDWCVQFQQMLAALAALGGGPVPPPLPQAWLIQRLAQTRHHPDRLAEACDKAPAASASPTLTEQPLDLSAKSTSSTSGTPPPEHNNLDHSRLKRTVLDSGGNSATRRTYTDDELQSALRDIQSGRLGTRRAAAIYRIPRSTLRNKINKFGIATEQSHESEPDSDPERTDSPPSVILKIPTFPPPDDKSSSPATPVTPVTPIIPPPQPPLNPPSQLLLPASVFADPPSTQHLFTSLSDVIAKSISQKFQQPLERPSQADLPFMRAPDRHVSVIKTPPDNQRNYAAPSNSRAPTNNNGQPAIGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQETKPQPKPPPPKPATKPFTNGLNGPETPGYPSGYPFWPGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERQPALLQRLTEPRVPIATTGEAPSLLRRLAGEPDDSPPARRPRIDSSDHQLAAEMREAVQRLRADKMRPRNGTPTPPGGGSPHAPTAPAAPPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154931;
- 90% Identity
- iTF_01154931;
- 80% Identity
- -