Porl025614.1
Basic Information
- Insect
- Parnassius orleans
- Gene Symbol
- Mblk-1
- Assembly
- GCA_029286625.1
- Location
- JAGSMP010000089.1:3316730-3352022[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-12 4e-09 38.0 0.0 1 43 165 208 165 210 0.92 2 2 5.4e-18 3.1e-15 57.6 0.0 1 43 371 414 371 416 0.95
Sequence Information
- Coding Sequence
- ATGTGTGGACTTTTGCGAGCTGATGGTGAAATAGAAGAAGCTATAATGAATGAAGTAAGTCCAGCGTCGGAGTCGGACAGCAGCTCGGTGTCAGGGGCGAAGAGCCCCGCTGGCGCCCCGCCCCTGCTGCAGCAAATGCTGCAGCTGCAACTACAGGCCCAAAGTCCACAGGCCATTGCACAGTTCCAGCAGATGCTGGCGGCGTTGGCGGCGCTGGGCAGCGGGCTGGTGCCGCCGCCGCTGCCGCAGGCCTGGCTCATACAGCGACTGGCGCAGACGAGACAACATCCCGACAGGTTACCCGAGGCGTGTGACAAGGCCCCAGCGGCGAGCGCGTCCCCCACGCTGACCGAGCAGCCCCTCGATCTCAGCGCCAAGTCTACTTCCAGCACCAGCGGCACCCCGCCCCCAGAACACAACAACTTGGACAACTCCAGATTAAAACGGGCAGGCCTAGACAGTGCTAGCAATAGTACAACGAGGAGAACTTACACCGATGACGAACTCCAATCGGCCCTCCGAGATATTCAGTCGGGACGCCTCGGCACTAGAAGAGCCGCTGCGATCTACAGAATACCGCGCTCTACTCTCAGGAATAAAATCAACAAGTGCGGCATTACAGCCGAGCAGGGTCACGAGTCTGAACCTGATAGCGACCCCGAAAGAACCGACTCTCCGCCGTCAGTCATACTAAAAATACCAACGTTCCCACCACCGGAAGACAAAAGCCCTTCCCCAGCCACGCCAGTAACCCCAATAACACCGATCATCCCACCTCCTCAGCCGCCATTAAATCCACCTTCTCAGCTTCTCCTTCCAGCATCAGTTTTTGCCGACCCGCCATCTTCTCAACATCTATTCACGTCTCTGAGCGATGTCATAGCTAAGAGCATCAGTCAAAAATTCCAGCAGCCTCTAGAGAGGCCGCCGCAACCCGATTTGCCCTTCATGAGGGCGCCAGATAGGCACGTGTCGGTGATCAAAACACCACCAGAAAATCAAAGGAATTACGCAGCGCCAAGCAACTCTAGAGCGACCACGAACAACAATGGCCAACCTGCTACTGGCGGGAAGGGGACTCGACCCaagcgtggaaaatacagaaaCTACGACAGGGATAGCTTAGTGGAGGCTGTAAAAGCGGTGCAGAGAGGAGAGATGTCCGTGCACAGAGCGGGCTCGTACTACGGAGTGCCCCATTCGACGCTAGAGTATAAAGTGAAGGAACGGCATCTGATGCGGCCGAGAAAACGCGAACCGAAGCCGCAACAGGAAACGAAGCCGCAACCGAAGCCACCGCCACCCAAGCCACCTACGAAACCCTTCACGAACGGCCTCAACGGGCCGGAAACACCGGGGTATCCAACAGGTTATCCATTTTGGCCGGGGGGCTTTGCTCCACCGCCGGCCCCAGATTTATACGCGTCCCACATGATGCGACGATTGCGCGACGAAGCACCGCCGGCGAACGGGTCCTTTCTCGAGGGGATTATCAGATCGAGTTTGGAGCGACAGCCGGCGCTCTTGCAGCGGCTTACGGAGCCCCGAGCGCCAATAGCACCGACAGGCGAAGCGCCCAGTTTGCTGCGGAGGCTGGCGGGCGAGCCAGACGATTCCCCGCCGGCGAGACGTCCCCGCATAGACAGTTCGGATCGGCAGCTGGCCGCTGAGATGCGCGAAGCTGTCCAGAGACTACGGGCGGACAAGATGCGGCCGAGGAACGGCACCCCGACGCCGCCCGGCGGCTGCTCGccccccgcgcccgcgcccgcgccgcccGACCGCGTGTAG
- Protein Sequence
- MCGLLRADGEIEEAIMNEVSPASESDSSSVSGAKSPAGAPPLLQQMLQLQLQAQSPQAIAQFQQMLAALAALGSGLVPPPLPQAWLIQRLAQTRQHPDRLPEACDKAPAASASPTLTEQPLDLSAKSTSSTSGTPPPEHNNLDNSRLKRAGLDSASNSTTRRTYTDDELQSALRDIQSGRLGTRRAAAIYRIPRSTLRNKINKCGITAEQGHESEPDSDPERTDSPPSVILKIPTFPPPEDKSPSPATPVTPITPIIPPPQPPLNPPSQLLLPASVFADPPSSQHLFTSLSDVIAKSISQKFQQPLERPPQPDLPFMRAPDRHVSVIKTPPENQRNYAAPSNSRATTNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQETKPQPKPPPPKPPTKPFTNGLNGPETPGYPTGYPFWPGGFAPPPAPDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERQPALLQRLTEPRAPIAPTGEAPSLLRRLAGEPDDSPPARRPRIDSSDRQLAAEMREAVQRLRADKMRPRNGTPTPPGGCSPPAPAPAPPDRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154931;
- 90% Identity
- iTF_00957879;
- 80% Identity
- -