Basic Information

Insect: Parnassius apollo
Gene Symbol: RAB37
Assembly: GCA_907164705.1
Location: CAJQZP010001037.1:14285873-14336822[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0037 0.37 12.0 1.0 3 23 455 476 454 476 0.96

2 23 0.26 26 6.1 0.3 1 22 865 886 865 886 0.95

3 23 5.1 5.2e+02 2.1 0.3 1 22 928 949 928 951 0.82

4 23 0.16 16 6.8 0.3 3 21 962 980 960 981 0.93

5 23 0.26 27 6.1 0.0 3 23 990 1011 988 1011 0.93

6 23 0.0046 0.46 11.7 0.1 3 23 1032 1053 1030 1053 0.96

7 23 0.0014 0.15 13.2 2.5 1 23 1059 1082 1059 1082 0.95

8 23 0.096 9.7 7.5 0.0 1 23 1108 1131 1108 1131 0.90

9 23 0.055 5.6 8.3 4.2 1 23 1136 1158 1136 1158 0.97

10 23 0.0071 0.72 11.1 0.2 1 23 1164 1187 1164 1187 0.95

11 23 0.0018 0.18 13.0 1.3 1 23 1200 1222 1200 1222 0.97

12 23 0.00014 0.014 16.5 1.8 1 23 1271 1294 1271 1294 0.97

13 23 0.0037 0.37 12.0 1.7 1 23 1356 1379 1356 1379 0.96

14 23 0.00084 0.086 14.0 2.1 2 23 1404 1426 1403 1426 0.95

15 23 0.066 6.7 8.0 0.1 2 23 1432 1454 1431 1454 0.93

16 23 0.0076 0.77 11.0 0.2 1 21 1498 1518 1498 1519 0.95

17 23 0.00032 0.032 15.3 1.0 1 23 1529 1551 1529 1551 0.93

18 23 8.6e-05 0.0087 17.1 0.3 2 23 1640 1662 1640 1662 0.93

19 23 1.4e-07 1.4e-05 25.9 1.1 3 23 1669 1689 1668 1689 0.98

20 23 0.0039 0.4 11.9 0.7 1 23 1708 1730 1708 1731 0.93

21 23 0.11 11 7.3 0.0 1 23 1751 1773 1751 1773 0.98

22 23 0.0091 0.93 10.7 0.4 1 23 1779 1802 1779 1802 0.95

23 23 0.00019 0.02 16.0 0.4 1 23 1810 1833 1810 1833 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0037	0.37	12.0	1.0	3	23	455	476	454	476	0.96
2	23	0.26	26	6.1	0.3	1	22	865	886	865	886	0.95
3	23	5.1	5.2e+02	2.1	0.3	1	22	928	949	928	951	0.82
4	23	0.16	16	6.8	0.3	3	21	962	980	960	981	0.93
5	23	0.26	27	6.1	0.0	3	23	990	1011	988	1011	0.93
6	23	0.0046	0.46	11.7	0.1	3	23	1032	1053	1030	1053	0.96
7	23	0.0014	0.15	13.2	2.5	1	23	1059	1082	1059	1082	0.95
8	23	0.096	9.7	7.5	0.0	1	23	1108	1131	1108	1131	0.90
9	23	0.055	5.6	8.3	4.2	1	23	1136	1158	1136	1158	0.97
10	23	0.0071	0.72	11.1	0.2	1	23	1164	1187	1164	1187	0.95
11	23	0.0018	0.18	13.0	1.3	1	23	1200	1222	1200	1222	0.97
12	23	0.00014	0.014	16.5	1.8	1	23	1271	1294	1271	1294	0.97
13	23	0.0037	0.37	12.0	1.7	1	23	1356	1379	1356	1379	0.96
14	23	0.00084	0.086	14.0	2.1	2	23	1404	1426	1403	1426	0.95
15	23	0.066	6.7	8.0	0.1	2	23	1432	1454	1431	1454	0.93
16	23	0.0076	0.77	11.0	0.2	1	21	1498	1518	1498	1519	0.95
17	23	0.00032	0.032	15.3	1.0	1	23	1529	1551	1529	1551	0.93
18	23	8.6e-05	0.0087	17.1	0.3	2	23	1640	1662	1640	1662	0.93
19	23	1.4e-07	1.4e-05	25.9	1.1	3	23	1669	1689	1668	1689	0.98
20	23	0.0039	0.4	11.9	0.7	1	23	1708	1730	1708	1731	0.93
21	23	0.11	11	7.3	0.0	1	23	1751	1773	1751	1773	0.98
22	23	0.0091	0.93	10.7	0.4	1	23	1779	1802	1779	1802	0.95
23	23	0.00019	0.02	16.0	0.4	1	23	1810	1833	1810	1833	0.96

Sequence Information

Coding Sequence: ATGTGGAATTCAAACGCCATGGACAATAGACAGATGGAAAAGCGAGTGGTTATTGGAAGAGTCCGGCCGACATGGGCACGGAACATGCCAGAGGCGAGAGAAGATGACGATAAAAGTGACCAAGAAGTTGGAGTCATGCCGCACAGTGAGCCTCCGTCGCCTACAGACACCTGGGAACAGCAGAACAAACAAGAAGATAAATACGATGTATTTGGAAAGGTGATGCTTCTCGGAGACAGCGGCGTTGGCAAGACATGCATGCTAGTGCGCTTCCGTGATGGCACATTCCTCTCCGGAAACTACATTTCGACCGTCGGCATCGACTTCCGGAATAAGGTAGTTACAGTAGACGGCGTCAAAGTAAAGCTTCAAATTTGGGACACGGCTGGCCAAGAGCGCTTCCGTAGCGTCACTCACGCTTACTACAGGGATGCACATGCACTTCTGCTTTTATACGATGTGACCAACAAGATAAGTTTTGACAACATACGCGCCTGGCTTGGCGAGATACGGGAGTACGCACAAGACGACGTGGTCATAATGCTACTggGAAACAAATCCGACAGCGGCTTAGAGAGGGCGGTGAGGCGCGAGGAGGGACAGCGCTTGGCGAGAGAATATCAAGTCGAATTTATGGAGACGTCAGCGAAAACCGGACTGAATGTGGAAGCGGCATTTGCTCATGTGGCGCGCGCTCTAGTCGCGAAAGCGAACCCTGTTGACCCAGCCAGGCTAGCAGTGCGCGCGCAACCGTCACAGGAACAAAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATATTTCCTACCACCAGTTCGGATGAATCGGAACCTCCTGCCATCGCATCAAAAATTAAGGATTGTGTGTCCGTACAGATAAACGAAGATGACGACCTGCCAACTAATGTTTGCAAGAAATGCATGGACAATGTTAATAACTGGCATATTTTTAAGGCTGTATGTGAAAGGACACAAAACAAACTACAGTCTCTGATTAAAAATGATGGCAGCCAACTAGAAGAGGTGCAAATTAAAAGTGAACCTTTGTCTGATGAGGTTTATGATGATGGAGTGGTTATTGATGGCTCATACCCTGACCTTGAGaaTGCATCTACATCCAGCAAAGTACAACCAGAAGGTCCACCTATCTTGGCATCGTTGGGTCTTACACCGAGGAGTGATAAGGGCATGGACAGTGAaaaagatgaagaagaagatgaAGATGAAGAGATGAATGATTCCAGTCAACATTATGCAAGTGCACCCACCAATATGCCTGAAGTGTCAATCACAGTCATGCGTCCCACTGGGGAAACATTGCATGCCCGACAAGGAATCCAACAACTTGCCTCTAAGGATTGTTTAGTTTGCGGTCGATCTTATAGGTATTCGCATAACGCAAGGCGTCATGAGCTTACTGCGCATAGTTTTGATAGATACACAAATAAAATAACCATCAAAAAGTCTCAAACACACATGCAACCAAAACTCAGACCCAATCCATTTAATCCGAAAGCAAGGTTAATGCCTAATCCAATCAATCATAAAATGCAGCTTGTTCAAAAAGGGATACCTACCAAAATTATGCAGCAGAAGGTTGTGGCCCCACCAAAGCCTATACCAATAAAAGCGCCAAAAGGCTCGCAAAATAATTTGCCATATCCACTTCGCATAAAAGCTCTTAAAGACTTGCAAATTAAGAAAAAAGAACCTCAAATTTTAAAAACGTTATTGACAACAAAACCTGAAATTTTAGTATCTGAACCAGAAATAATTAACTCTGCTCCAGAAAGTCCGGAAACTTTGATTTCTGAGCCGGAAATAGCTTCATTTCAAGTAGAAACCATTCTGGAAGAACCAGAGACTTATAATCAAGAACAAGACGGCGAAGAGGTAGATGGTGATACGCAAAATAATCAGAGTCAAAATTACGACACTGTTGATATGGATTCTGATAATGAAATTGAAATCGCACGTCAGCAAGAAGACGCGGTGGAAGGTGAAGGCAAACTTGAAGAAGATCACCAAGTTGAAAACGAAGCTGAAGAAGGTAATGAAATAGAAAATTTGGACAATGGCGATGAAAACAATATTGAAAGAAACCATAGCGACAATGAAAATGATCACATTGACGATACTGCTGATAGTCAAGATGAAATACAAATCGTTAATGAAACGGAAGGTAGGGAGGAAGATGAAACCAAAGAAGGAGAAGAAGATCATGATGAGAGGGACGGTGAACAGCCGGAGTATAACCATGAAGAAAATGAGGATGACGATGATGAGCTACCACCTATAGCTCCAGTTGTAGAAATTAATGAAGACTTGCAAATGAATTCGTTTAATAGTGAGATACACGAAGAAGAGGAGCTTGATGAAACAGTTGACCCAAATGATACTGCAGATACTGTAAAAGAACTTGATCCTGACAAATTATATGTGACTAAGACACAAAGagattttattcataagtatcGTGATATCATTGAACAAATCAATACCAAAAGATGTCTATGTTGTGATAAAGAACACCCACGGCGTAAGGCTGTAATACAACATTTACAGAAAAATGGGCACAAGGTCCCAAAACATACATGCTACAACTGCGTTGTCACCTTTGGCCATATTGGGGCTTTACTTAGTCATATGCGGTCTAACACATGCACAGATTTGTGGAAAATTATTTATAACGAAAATGGAATCACTGATGACTTAGTTTTAGAAGATGAGCCTAAAGATGCTAAAGTtcaatataaagatatttttaatgcTAGGTCATATGCATGTAAATTATGCCCAGCAAAATTCCAACTTAAACAATTTATTATGAAACATGTATTGGATGTGCACGAGGATGGTCAATCCCGTGTGCATCTTGCTTGTGTTCACTGTGGGTCTCGATTTAAAGACAAGGCTATATGGAAAAGACATATACGTAACGGAGAGTGTACAGTTTACATCGCGTGTGACCTATGTACAGAAATATTTAGTAACATGCAAGCTTTTAATGACCACGCATTGTCTGTGCATGCTGGGAATTTCGACCAAACTGATAATCAGAACAAATGTGTTGATGGTAGACCAACAGATTGTCCGATTTGCGGTAAGAAGAATAGCAGCTATCCCAATTTGGTTAAACATTTGAAGATAATTCATAGTGAAGAAAAACCTCATTATTGCCAGCATTGTGATTCCAAATTTGAACAAGCTGCTGATCTTAACAAACACATTTATATGGAACATTCTGATAGAACCTTAGGAATGCAGACCAATGAGCCTGACATGTCGCTCGTCAAAGAAGAGGCCGAAGAATATCATTATTCATGCACAGAATGTAACGCCATATTTGAAACCGTTGATGCTTGGACAGATCATCAGGTGGCTGAGCATAATCAAATTGCTCATCATTGTGATCAATGTTATAAGAAATTTTTGAGACCATCGGAACTGGCAGAACACAAAAATACGCATTTGAGAGTGAAGTTCTATCCTTGCAGTATTTGTACTAATTCTTACAGCACGCCGCAAAAACTTTCAGAACACGTCCAACAAGTCCATCCTGGAGTGGGAGCAAGTGCCGCTTTAGATTCTGAATTTTTCTGCGACATTTGTATTAGATCGTTCAAAAGTCGTCAAGCTTATTCAAACCATATGCGTATTCACGCTAAAGTACCTACAACTAATCGGAAACCCGGGGAACCTAAAGGATTTGCGCCGCAAATTATTGGGAAACCGATAAAATCTTTTTCTATGGTACAGCCTGGTTTTGTATCTTTCAAACCTAATTGCAATGTTCCCAATGCACCTTATTCATGTGATATTTGTGGAAAGGGCTTTATGCACAAGAAAAATATTTGGAAGCATAAGAAAGTGCTACATGCAGATGTTGTTGGAGACCGAAATGACAGTGAAGAAAATACTATGCAGGCATCAACTGAAGAAGATGAATACAATTTAGACGAAAATGGTGCTGTACTTTCCACTCCCCagtttaatagttttaattttactaatttaacAAATAGCTTGCAACCCCAAACTTCTCCTCAAGATCCAACACCCTACTCTTGTGAACTATGCTTTAAACGTTTTCCCCTCAGGACAAGTTTATGGAAACACAAACGAGCTAAGCATGGAATTATTAACGCTAGTGCTAGTGGTAGTCCTGATTCTCAGATGGTGGGAAGTAGTGAAACCGGCAGATCTAGCTGCACTATTTGTAAAATTACTTTTTCAGACAAAAAGTCTTACTACCGTCATAGGAAAAATGTTCACAAGTCATCAGTTCAGATGTGCAAGATTTGTGGTAAGCCTCTAAATTCGACATTGGAGTTATATGAGCATTTAAAAGCTGCTCATGCTAGAGAGTTATTAGGATATAATGAAAACCAAGGTTCCAGTAAGTCACAAGAAATTGTTCAAGAGTTAGACGTAGATTACGAAGGTGACCAGGATTCTATGGATCCTAGCTTAGAATACCAAGCTCGATATCCGTGTGATACATGCGGAAAACAATTTGTAGGTTTGCTAGCACTGCAAAACCATCAATGTATTAATCAAATACAATCTTCCCCCCAAACCTTTGATTGCGAGATTTGTCACAAAAGTTATACTTCCATTTCTGCATTAAAAAGTCACCGTGGATGGCATTTACGGTCACCTGATGGAAAAGCGGCTGCTAACAATACAGGTCTATGGATGCCTCAGCATAAAGTAACAAGCAAAGTTAGCAAACATGAAATTGTCGATCCCTCCCAACTTGCACGGGTGACTCATTCGACTCCTGCAACTGTAGTCAAAAGGAGATTACCACCGGAAGTAGAAGTGACTGTTGTTAACCCAAATAAGAAAATGCGTTCTGATGATTCAGTAGAATTAGAACAGCAGAATTCATCCACTGGAGCTGAAGATAGATATTGCACAATATGTGATAAGGAGTTCACAAAACGAGCGGCTTATCAACGTCACATGGATGAGGTTCATCAACCTAACTCTGTATTCTGTCCCGTTTGTGACAAGAGTTTTACGCGAAAATCAACCCTGATCGTTCATATGAAGAAACATTACGAAAGTGGGGAAAGTAGTTCAGCTGCAGCTGATCAGATGGAGGATGACGTTCACGCATGTGACCTTTGTGGCGTTCAATATGATAATGAGAGCGCGCTTAGAGCCCACCGAGCAAGGCATCATGGTGATGAATCAGGGGAGTCTGAAGATGATGGGACCAGTGTTCCACCTCCTGGCGAATTCACCTGCGCTCAATGTGGGGATGGAGTCGCCACACCCCGTGATTTAATTGCCCACCGCTCCATGCATGCCACTCCAACAAAATTCTTCTGCAACATTTGCAAGGTTTACTTTGCTCGAGCTATCGACCTCTCGTCCCACACACGAGCCAGACATGCGGACAATGAAAAGGTATTTTTCCCATGCGCAATGTGTGACCGTTTTTACATGAACAAGAAGAGCTTACAACGACACATTGAGATGGCTCACTGA
Protein Sequence: MWNSNAMDNRQMEKRVVIGRVRPTWARNMPEAREDDDKSDQEVGVMPHSEPPSPTDTWEQQNKQEDKYDVFGKVMLLGDSGVGKTCMLVRFRDGTFLSGNYISTVGIDFRNKVVTVDGVKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKISFDNIRAWLGEIREYAQDDVVIMLLGNKSDSGLERAVRREEGQRLAREYQVEFMETSAKTGLNVEAAFAHVARALVAKANPVDPARLAVRAQPSQEQRLCLSSRGELLPIFPTTSSDESEPPAIASKIKDCVSVQINEDDDLPTNVCKKCMDNVNNWHIFKAVCERTQNKLQSLIKNDGSQLEEVQIKSEPLSDEVYDDGVVIDGSYPDLENASTSSKVQPEGPPILASLGLTPRSDKGMDSEKDEEEDEDEEMNDSSQHYASAPTNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITIKKSQTHMQPKLRPNPFNPKARLMPNPINHKMQLVQKGIPTKIMQQKVVAPPKPIPIKAPKGSQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEILVSEPEIINSAPESPETLISEPEIASFQVETILEEPETYNQEQDGEEVDGDTQNNQSQNYDTVDMDSDNEIEIARQQEDAVEGEGKLEEDHQVENEAEEGNEIENLDNGDENNIERNHSDNENDHIDDTADSQDEIQIVNETEGREEDETKEGEEDHDERDGEQPEYNHEENEDDDDELPPIAPVVEINEDLQMNSFNSEIHEEEELDETVDPNDTADTVKELDPDKLYVTKTQRDFIHKYRDIIEQINTKRCLCCDKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDAKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVHLACVHCGSRFKDKAIWKRHIRNGECTVYIACDLCTEIFSNMQAFNDHALSVHAGNFDQTDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMQTNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCYKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPQKLSEHVQQVHPGVGASAALDSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIIGKPIKSFSMVQPGFVSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADVVGDRNDSEENTMQASTEEDEYNLDENGAVLSTPQFNSFNFTNLTNSLQPQTSPQDPTPYSCELCFKRFPLRTSLWKHKRAKHGIINASASGSPDSQMVGSSETGRSSCTICKITFSDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNENQGSSKSQEIVQELDVDYEGDQDSMDPSLEYQARYPCDTCGKQFVGLLALQNHQCINQIQSSPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEIVDPSQLARVTHSTPATVVKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSSTGAEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGESSSAAADQMEDDVHACDLCGVQYDNESALRAHRARHHGDESGESEDDGTSVPPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARAIDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01155687;
90% Identity: iTF_01155687; iTF_01157028; iTF_01158124; iTF_01159887;
80% Identity: -