Basic Information

Insect: Parnassius mnemosyne
Gene Symbol: -
Assembly: GCA_963668995.1
Location: CAVLGL010000035.1:36497190-36501497[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0035 0.73 12.3 1.0 3 23 58 79 57 79 0.96

2 23 0.25 52 6.5 0.3 1 22 467 488 467 488 0.95

3 23 4.9 1e+03 2.4 0.3 1 22 530 551 530 553 0.82

4 23 0.046 9.6 8.8 0.5 3 21 564 582 562 583 0.94

5 23 0.25 52 6.5 0.0 3 23 592 613 590 613 0.93

6 23 0.0043 0.91 12.0 0.1 3 23 634 655 632 655 0.96

7 23 0.0014 0.29 13.6 2.5 1 23 661 684 661 684 0.95

8 23 0.091 19 7.9 0.0 1 23 710 733 710 733 0.90

9 23 0.052 11 8.6 4.2 1 23 738 760 738 760 0.97

10 23 0.0067 1.4 11.4 0.2 1 23 766 789 766 789 0.95

11 23 0.0017 0.35 13.3 1.3 1 23 802 824 802 824 0.97

12 23 0.00013 0.027 16.8 1.8 1 23 873 896 873 896 0.97

13 23 0.0035 0.73 12.3 1.7 1 23 958 981 958 981 0.96

14 23 0.0008 0.17 14.3 2.1 2 23 1006 1028 1005 1028 0.95

15 23 0.063 13 8.4 0.1 2 23 1034 1056 1033 1056 0.93

16 23 0.0072 1.5 11.3 0.2 1 21 1100 1120 1100 1121 0.95

17 23 0.0003 0.064 15.7 1.0 1 23 1131 1153 1131 1153 0.93

18 23 8.1e-05 0.017 17.5 0.3 2 23 1242 1264 1242 1264 0.93

19 23 1.3e-07 2.7e-05 26.3 1.1 3 23 1271 1291 1270 1291 0.98

20 23 0.0037 0.78 12.2 0.7 1 23 1310 1332 1310 1333 0.93

21 23 0.1 22 7.7 0.0 1 23 1353 1375 1353 1375 0.98

22 23 0.0087 1.8 11.1 0.4 1 23 1381 1404 1381 1404 0.95

23 23 0.00018 0.039 16.3 0.4 1 23 1412 1435 1412 1435 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0035	0.73	12.3	1.0	3	23	58	79	57	79	0.96
2	23	0.25	52	6.5	0.3	1	22	467	488	467	488	0.95
3	23	4.9	1e+03	2.4	0.3	1	22	530	551	530	553	0.82
4	23	0.046	9.6	8.8	0.5	3	21	564	582	562	583	0.94
5	23	0.25	52	6.5	0.0	3	23	592	613	590	613	0.93
6	23	0.0043	0.91	12.0	0.1	3	23	634	655	632	655	0.96
7	23	0.0014	0.29	13.6	2.5	1	23	661	684	661	684	0.95
8	23	0.091	19	7.9	0.0	1	23	710	733	710	733	0.90
9	23	0.052	11	8.6	4.2	1	23	738	760	738	760	0.97
10	23	0.0067	1.4	11.4	0.2	1	23	766	789	766	789	0.95
11	23	0.0017	0.35	13.3	1.3	1	23	802	824	802	824	0.97
12	23	0.00013	0.027	16.8	1.8	1	23	873	896	873	896	0.97
13	23	0.0035	0.73	12.3	1.7	1	23	958	981	958	981	0.96
14	23	0.0008	0.17	14.3	2.1	2	23	1006	1028	1005	1028	0.95
15	23	0.063	13	8.4	0.1	2	23	1034	1056	1033	1056	0.93
16	23	0.0072	1.5	11.3	0.2	1	21	1100	1120	1100	1121	0.95
17	23	0.0003	0.064	15.7	1.0	1	23	1131	1153	1131	1153	0.93
18	23	8.1e-05	0.017	17.5	0.3	2	23	1242	1264	1242	1264	0.93
19	23	1.3e-07	2.7e-05	26.3	1.1	3	23	1271	1291	1270	1291	0.98
20	23	0.0037	0.78	12.2	0.7	1	23	1310	1332	1310	1333	0.93
21	23	0.1	22	7.7	0.0	1	23	1353	1375	1353	1375	0.98
22	23	0.0087	1.8	11.1	0.4	1	23	1381	1404	1381	1404	0.95
23	23	0.00018	0.039	16.3	0.4	1	23	1412	1435	1412	1435	0.96

Sequence Information

Coding Sequence: ATGGACAGTGAAAAagatgaagaagaagatgaaGATGAAGAGATGAATGATTCCAGTCAACATTATGTAAGTGCACCCACCAATATGCCTGAAGTGTCCATCACTGTCATGCGTCCCACTGGTGAAACATTGCATGCCCGACAAGGAATCCAACAACTTGCCTCCAAGGATTGTTTAGTATGCGGTCGATCTTATAGGTATTCTCATAATGCAAGGCGTCATGAGCTTACTGCGCATAGTTTTGATAGATACACAAATAAAATAACCATCAAAAAGTCTCAGACACACATGCACCCAAAACTCCGACCCAATCCATTTAATCCCAAAGCAAGGCTTATGCCTAATCCAATCAGCCATAAAATGCAGCTTGTTCAAAAAGGAGTACCTACAAAAAATATGCAGCAGAAGGTTGTCGCCCCACCAAAGCCTATACCTATAAAAGCGCCAAAAGGCTCGCAAAATAATTTGCCATATCCACTTCGCATAAAAGCTCTTAAAGACTtgcaaataaagaaaaaagaaccTCAAATATTAAAAACGTTATTGACAACAAAACCTGAAATTTTAGTATCCGAACCAGAAATAATCAACTCTGCTCCAGAAAGTCCGGAAACTTTGATTTCTGAGCCGGAAATAGCTTCATTCCAAGTAGAAACCATTCTGGAAGAACCAGATACTTATAATCAACAACAAGATGACGAAGAGGTAGATGGTGATACGCAAAATAATCAGAGTCAAAATTACGACACTGTTGATATGGATTCTGACAATGAAATTGAAATCGCACGGCAACAAGAAGACGCGGTGGAAGGTGAAGGCAAAGTTGAAGATCACCAAGTTGAAAACGAGGCTGAGGAAGgaaatgaaattgaaaatttgGATAATGGCGATgaaaataatattgaaagaaaCCAAAGCGACAATGACAATGATCACATTGATGATACTGCTGATAGTCAAGATGAAATACAAATCATTAATGAAACGGAAGGTAGAGAGGAAGATGAAACCAAAGAAGGAGAAGAAGACAATGACGAGAGGGATGGTGAACAGCCAGAGTATAACCATGAAGAAAATGAAGATGACGATGATGAGCTACCACCTATAGCTCCAGTTGTAGAAATTAATGAAGACTTGCAAATTAATTCGTTTAATAGCGAGATAAACGACGAAGAGGAGCTTGATGAAACAGCTGACCCAAATGATACTGCAGATACTGTAAAAGAACTTGATCCTGACAAATTATATGTTACTAAGACACAAAGAGATTTTATTCATAAGTATCGCGATATCATTGAACAAATCAATACCAAAAGATGTCTATGTTGTGATAAAGAACATCCGCGGCGTAAGGCTGTAATACAACATTTACAGAAAAATGGGCACAAGGTCCCAAAACATACATGCTATAACTGCGTTGTCACTTTTGGCCATATTGGTGCTTTACTTAGCCATATGCGGTCTAACACGTGCACAGATTTgtggaaaattatttataatgaaaatGGAATCACTGATGATTTAGTTTTAGAAGATGAgcctaaagatactaaagttcaatataaagatatttttaatgcTAGGTCATATGCATGTAAATTATGTCCAGCAAAATTCCAACTTAAACAATTTATTATGAAACATGTATTGGATGTGCATGAGGATGGTCAATCCCGTGTGCATCTTGCTTGTGTTCACTGTGGTTCTCGATTTAAAGACAAGTCTATATGGAAAAGACACATACGTAACGGAGAGTGTACGGTTTACATCGCGTGCGACCTATGTACTGAAATATTTAGTAACATGCAAGCTTTTAATGACCACGCATTGTCTGTACATGCCGGGAATTTCGACCAAAGTGATAATCAGAACAAATGTGTTGACGGTAGACCAACAGATTGTCCGATTTGTGGGAAGAAGAATAGCAGCTATCCCAATTTAGTTAAACATTTGAAGATAATTCATTGTGAGGAAAAACCTCATTATTGTCAGCATTGTGATTCCAAATTTGAACAAGCTGCTGATCTTAACAAACACATTTATATGGAACATTCTGATAGAACCTTAGGAATGCAGACCAATGAGCCTGACATGTCGCTCGTCAAAGAAGAGGCCGAAGAGTATCATTATTCATGCACAGAATGTAACGCCATATTTGAAACCGTTGATGCTTGGACAGATCATCAGGTGGCTGAACATAATCAAATTGCTCATCATTGTGATCAATGTTATAAGAAATTTTTAAGACCATCGGAATTGGCAGAACATAAAAATACGCATTTGAGAGTGAAGTTCTATCCTTGCAGTATTTGCACTAATTCTTATAGCACGCCGCAAAAACTTTCAGAACACGTCCAACAAGTTCACCCTGGGGTAGGAGCAAGCACCACTTTAGATTCTGAATTTTTCTGTGACATTTGTATTAGGTCGTTCAAAAGTCGTCAAGCCTATTCAAACCATATGCGTATTCACGCTAAAGTACCTACAACTAATCGGAAACCCGGGGAACCTAAAGGATTTGCGCCTCAAATTGTTGGGAAACCGATAAAATCTTTTTCTATGGTACAGCCTGGTTTTGTATCTTTTAAACCTAATTGCAACGTTCCCAATGCACCTTATTCATGTGATATCTGTGGAAAGGGTTTTATGCACAAGAAAAATATCTGGAAGCATAAGAAAGTGTTACATGCTGATGTTGTTGGCGACAGAAATGATAGTGAAGAAAATACGATGCAAGCATCTACTGAAGAAGATGAATACAATTTAGATGAAAATGGTGCTGTACTTTCCACTCCCCAgtttaatagttttaattttactaatttaacAAATAGCTTGCAACCGCAAACTTCTCCTCAAGATCCAACGCCCTATTCTTGTGAACTATGCTTTAAACGGTTTCCTCTCAGGACAAGTTTATGGAAACACAAACGAGCTAAACATGGAATTATTAATGCTAGTGCTAGTGGTAGTCTTGATTCTCAAATGATGGGAAGTAGTGAAACCGGCAGATCTAGCTGCACGATTTGCAAAATTACTTTTTCAGACAAAAAATCTTACTACCGTCATAGGAAAAATGTTCACAAATCATCAGTTCAGATGTGCAAGATTTGTGGTAAGCCTCTAAATTCGACATTGGAATTATATGAGCATTTAAAAGCTGCTCATGCTAGAGAGTTATTAGGATACAATGAAAACCAAGGTTCCAGTAAGTCACAGGAAATGGGTCAAGAATTAGAAGTAGATTACGAAGGTGACCAGGATTCTATGGATCCTAGTTTAGAATACCAAGCTCGATATCCATGTGATACATGCGGAAAACAATTTGTAGGTTTGCTAGCGCTGCAAAACCATCAATGTATTAATCAAATACAATCTTCACCCCAAACCTTTGATTGTGAGATTTGTCACAAAAGTTATACTTCCATTTCTGCATTAAAAAGTCACCGTGGATGGCATTTACGATCGCCTGACGGAAAAGCGGCTGCTAATAATACAGGTCTATGGATGCCTCAGCACAAAGTGACAAGCAAAGTTAGTAAACATGAAATTGTCGATCCCTCCCAACTTGCAAAAGTGACTCATTCGACTCCTGCAACTGTAGTCAAAAGGAGATTACCACCAGAAGTAGAAGTGACTGTTGTTAACCCAAATAAGAAAATGCGTTCCGATGATTCAGTAGAATTAGAGCAGCAGAATTCCTCCACTGGAGCAGAAGATAGATATTGCACAATATGTGATAAAGAGTTCACAAAACGAGCGGCTTATCAACGTCACATGGATGAGGTACATCAACCAAACTCTGTATTCTGTCCTGTTTGTGACAAGAGTTTTACGCGGAAATCGACGCTGATTGTTCATATGAAGAAACATTACGAAAGTGGTGAGGGTAGTTCAACTGCAGCTGATCAGATGGAGGATGAGGTTCACGCATGTGACCTTTGTGGCGTTCAATATGATAATGAGAGTGCCCTTAGAGCCCACCGAGCAAGGCATCATGGTGATGAGTCAGGGGAGTCTGAAGATGATGGGACCAGTGTTCCACCTCCTGGCGAATTCACCTGCGCACAATGTGGGGATGGAGTCGCTACACCCCGTGATCTGATTGCACACCGCTCCATGCATGCTACTCCAACAAAATTCTTCTGCAACATTTGCAAAGTCTACTTTGCTAGAGCTATCGACCTCTCGTCCCACACACGAGCCAGACATGCGGACAATGAAAAGGTTTTTTTCCCATGTGCAATGTGTGACCGTTTTTACATGAACAAGAAGAGCTTACAACGGCACATTGAGATGGCTCACTGA
Protein Sequence: MDSEKDEEEDEDEEMNDSSQHYVSAPTNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKITIKKSQTHMHPKLRPNPFNPKARLMPNPISHKMQLVQKGVPTKNMQQKVVAPPKPIPIKAPKGSQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEILVSEPEIINSAPESPETLISEPEIASFQVETILEEPDTYNQQQDDEEVDGDTQNNQSQNYDTVDMDSDNEIEIARQQEDAVEGEGKVEDHQVENEAEEGNEIENLDNGDENNIERNQSDNDNDHIDDTADSQDEIQIINETEGREEDETKEGEEDNDERDGEQPEYNHEENEDDDDELPPIAPVVEINEDLQINSFNSEINDEEELDETADPNDTADTVKELDPDKLYVTKTQRDFIHKYRDIIEQINTKRCLCCDKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLEDEPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVHLACVHCGSRFKDKSIWKRHIRNGECTVYIACDLCTEIFSNMQAFNDHALSVHAGNFDQSDNQNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHCEEKPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMQTNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCYKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPQKLSEHVQQVHPGVGASTTLDSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIVGKPIKSFSMVQPGFVSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADVVGDRNDSEENTMQASTEEDEYNLDENGAVLSTPQFNSFNFTNLTNSLQPQTSPQDPTPYSCELCFKRFPLRTSLWKHKRAKHGIINASASGSLDSQMMGSSETGRSSCTICKITFSDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNENQGSSKSQEMGQELEVDYEGDQDSMDPSLEYQARYPCDTCGKQFVGLLALQNHQCINQIQSSPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEIVDPSQLAKVTHSTPATVVKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSSTGAEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGSSTAADQMEDEVHACDLCGVQYDNESALRAHRARHHGDESGESEDDGTSVPPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARAIDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01155687;
90% Identity: iTF_01154413;
80% Identity: -